RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 NPM2Q86SE8 214 aaKnown RBP9.2□□□□□ -0.94
SPIDR-228ENST00000588781 CLUAP1Q96AJ1 413 aa9.2□□□□□ -0.94
SPIDR-228ENST00000588781 CHMP4BQ9H444 224 aaKnown RBP9.2□□□□□ -0.94
SPIDR-228ENST00000588781 CABP2Q9NPB3 220 aa9.2□□□□□ -0.94
SPIDR-228ENST00000588781 A0A1W2PP64 1363 aa9.2□□□□□ -0.94
SPIDR-228ENST00000588781 ATP7BP35670 1465 aa9.2□□□□□ -0.94
SPIDR-228ENST00000588781 TNNT2P45379 298 aaPredicted RBP9.19□□□□□ -0.94
SPIDR-228ENST00000588781 SIRT1Q96EB6 747 aa9.19□□□□□ -0.94
SPIDR-228ENST00000588781 PRAM1Q96QH2 718 aa9.19□□□□□ -0.94
SPIDR-228ENST00000588781 STK26Q9P289 416 aa9.19□□□□□ -0.94
SPIDR-228ENST00000588781 HSPA1LP34931 641 aa9.18□□□□□ -0.94
SPIDR-228ENST00000588781 RARSP54136 660 aaKnown RBP9.18□□□□□ -0.94
SPIDR-228ENST00000588781 ZNF428Q96B54 188 aa9.18□□□□□ -0.94
SPIDR-228ENST00000588781 RWDD1Q9H446 243 aaPredicted RBP9.18□□□□□ -0.94
SPIDR-228ENST00000588781 ZNF335Q9H4Z2 1342 aaPredicted RBP9.18□□□□□ -0.94
SPIDR-228ENST00000588781 RIMS2Q9UQ26 1411 aa9.18□□□□□ -0.94
SPIDR-228ENST00000588781 KIF20BQ96Q89 1820 aa9.17□□□□□ -0.94
SPIDR-228ENST00000588781 MYO5BQ9ULV0 1848 aa9.17□□□□□ -0.94
SPIDR-228ENST00000588781 MINK1Q8N4C8 1332 aaPredicted RBP9.17□□□□□ -0.94
SPIDR-228ENST00000588781 IPO8O15397 1037 aaKnown RBP9.17□□□□□ -0.94
SPIDR-228ENST00000588781 DIAPH1O60610 1272 aaKnown RBP9.17□□□□□ -0.94
SPIDR-228ENST00000588781 BCAR3O75815 825 aa9.17□□□□□ -0.94
SPIDR-228ENST00000588781 NUTM2DQ5VT03 806 aaPredicted RBP9.17□□□□□ -0.94
SPIDR-228ENST00000588781 ZKSCAN2Q63HK3 967 aa9.17□□□□□ -0.94
SPIDR-228ENST00000588781 CDK19Q9BWU1 502 aa9.17□□□□□ -0.94
SPIDR-228ENST00000588781 SPINK5Q9NQ38 1064 aaPredicted RBP9.17□□□□□ -0.94
SPIDR-228ENST00000588781 A2ML1A8K2U0 1454 aa9.16□□□□□ -0.94
SPIDR-228ENST00000588781 U2SURPO15042 1029 aaKnown RBP9.16□□□□□ -0.94
SPIDR-228ENST00000588781 FCHSD2O94868 740 aa9.16□□□□□ -0.94
SPIDR-228ENST00000588781 NEUROD2Q15784 382 aa9.16□□□□□ -0.94
SPIDR-228ENST00000588781 UPF2Q9HAU5 1272 aaKnown RBP9.16□□□□□ -0.94
SPIDR-228ENST00000588781 CDC42BPGQ6DT37 1551 aa9.16□□□□□ -0.94
SPIDR-228ENST00000588781 FAM135BQ49AJ0 1406 aa9.15□□□□□ -0.94
SPIDR-228ENST00000588781 PNPLA6Q8IY17 1366 aa9.15□□□□□ -0.94
SPIDR-228ENST00000588781 KIF16BQ96L93 1317 aa9.15□□□□□ -0.94
SPIDR-228ENST00000588781 FYB1O15117 783 aa9.15□□□□□ -0.94
SPIDR-228ENST00000588781 PAK3O75914 559 aaPredicted RBP9.15□□□□□ -0.94
SPIDR-228ENST00000588781 TMPOP42166 694 aaKnown RBP9.15□□□□□ -0.94
SPIDR-228ENST00000588781 LMOD3Q0VAK6 560 aa9.15□□□□□ -0.94
SPIDR-228ENST00000588781 SAFB2Q14151 953 aaKnown RBP eCLIP9.15□□□□□ -0.94
SPIDR-228ENST00000588781 FTSJ3Q8IY81 847 aaKnown RBP9.15□□□□□ -0.94
SPIDR-228ENST00000588781 FRAT1Q92837 279 aaPredicted RBP9.15□□□□□ -0.94
SPIDR-228ENST00000588781 COL3A1P02461 1466 aaPredicted RBP9.15□□□□□ -0.95
SPIDR-228ENST00000588781 EDC4Q6P2E9 1401 aaKnown RBP9.14□□□□□ -0.95
SPIDR-228ENST00000588781 KNDC1Q76NI1 1749 aa9.14□□□□□ -0.95
SPIDR-228ENST00000588781 BECN1Q14457 450 aa9.14□□□□□ -0.95
SPIDR-228ENST00000588781 DZIP1LQ8IYY4 767 aaKnown RBP9.14□□□□□ -0.95
SPIDR-228ENST00000588781 GGNBP2Q9H3C7 697 aa9.14□□□□□ -0.95
SPIDR-228ENST00000588781 COG6Q9Y2V7 657 aa9.14□□□□□ -0.95
SPIDR-228ENST00000588781 RRP7AQ9Y3A4 280 aaKnown RBP9.14□□□□□ -0.95
SPIDR-228ENST00000588781 NCKAP5LQ9HCH0 1330 aa9.13□□□□□ -0.95
SPIDR-228ENST00000588781 EIF5BO60841 1220 aaKnown RBP9.13□□□□□ -0.95
SPIDR-228ENST00000588781 HAP1P54257 671 aaPredicted RBP9.13□□□□□ -0.95
SPIDR-228ENST00000588781 MVPQ14764 893 aaKnown RBP9.13□□□□□ -0.95
SPIDR-228ENST00000588781 ALDH1L2Q3SY69 923 aa9.13□□□□□ -0.95
SPIDR-228ENST00000588781 FBXO31Q5XUX0 539 aaPredicted RBP9.13□□□□□ -0.95
SPIDR-228ENST00000588781 DDX19BQ9UMR2 479 aa9.13□□□□□ -0.95
SPIDR-228ENST00000588781 NLRP1Q9C000 1473 aa9.13□□□□□ -0.95
SPIDR-228ENST00000588781 CD163L1Q9NR16 1453 aa9.13□□□□□ -0.95
SPIDR-228ENST00000588781 ZNF142P52746 1687 aaPredicted RBP9.13□□□□□ -0.95
SPIDR-228ENST00000588781 AATKQ6ZMQ8 1374 aa9.12□□□□□ -0.95
SPIDR-228ENST00000588781 RGS3P49796 1198 aa9.12□□□□□ -0.95
SPIDR-228ENST00000588781 NBR1Q14596 966 aa9.12□□□□□ -0.95
SPIDR-228ENST00000588781 C8orf34Q49A92 452 aa9.12□□□□□ -0.95
SPIDR-228ENST00000588781 PANK1Q8TE04 598 aa9.12□□□□□ -0.95
SPIDR-228ENST00000588781 PLEKHF1Q96S99 279 aa9.12□□□□□ -0.95
SPIDR-228ENST00000588781 ZNF692Q9BU19 519 aaPredicted RBP9.12□□□□□ -0.95
SPIDR-228ENST00000588781 SMC4Q9NTJ3 1288 aa9.12□□□□□ -0.95
SPIDR-228ENST00000588781 CABP1Q9NZU7 370 aa9.12□□□□□ -0.95
SPIDR-228ENST00000588781 TECPR2O15040 1411 aa9.12□□□□□ -0.95
SPIDR-228ENST00000588781 CDK12Q9NYV4 1490 aaPredicted RBP9.11□□□□□ -0.95
SPIDR-228ENST00000588781 VIRMAQ69YN4 1812 aaKnown RBP9.11□□□□□ -0.95
SPIDR-228ENST00000588781 WASLO00401 505 aaPredicted RBP9.11□□□□□ -0.95
SPIDR-228ENST00000588781 RIPK4P57078 832 aa9.11□□□□□ -0.95
SPIDR-228ENST00000588781 TNRQ92752 1358 aa9.11□□□□□ -0.95
SPIDR-228ENST00000588781 CPS1P31327 1500 aa9.1□□□□□ -0.95
SPIDR-228ENST00000588781 TOM1O60784 492 aa9.1□□□□□ -0.95
SPIDR-228ENST00000588781 DEKP35659 375 aaKnown RBP9.1□□□□□ -0.95
SPIDR-228ENST00000588781 BRPF1P55201 1214 aaPredicted RBP9.1□□□□□ -0.95
SPIDR-228ENST00000588781 COG3Q96JB2 828 aa9.1□□□□□ -0.95
SPIDR-228ENST00000588781 PPIP5K1Q6PFW1 1433 aa9.1□□□□□ -0.95
SPIDR-228ENST00000588781 SETD1AO15047 1707 aaKnown RBP9.1□□□□□ -0.95
SPIDR-228ENST00000588781 CPSF1Q10570 1443 aaKnown RBP9.09□□□□□ -0.95
SPIDR-228ENST00000588781 IGHDP01880 384 aa9.09□□□□□ -0.95
SPIDR-228ENST00000588781 GNAI1P63096 354 aa9.09□□□□□ -0.95
SPIDR-228ENST00000588781 PIP4K2BP78356 416 aa9.09□□□□□ -0.95
SPIDR-228ENST00000588781 EXOSC9Q06265 439 aaKnown RBP9.09□□□□□ -0.95
SPIDR-228ENST00000588781 HDAC1Q13547 482 aaPredicted RBP9.09□□□□□ -0.95
SPIDR-228ENST00000588781 NFE2L2Q16236 605 aa9.09□□□□□ -0.95
SPIDR-228ENST00000588781 ATF7IPQ6VMQ6 1270 aa9.09□□□□□ -0.95
SPIDR-228ENST00000588781 CCDC61Q9Y6R9 512 aa9.09□□□□□ -0.95
SPIDR-228ENST00000588781 ARHGAP45Q92619 1136 aa9.08□□□□□ -0.96
SPIDR-228ENST00000588781 CFAP44Q96MT7 982 aa9.08□□□□□ -0.96
SPIDR-228ENST00000588781 IFT57Q9NWB7 429 aa9.08□□□□□ -0.96
SPIDR-228ENST00000588781 TRIM35Q9UPQ4 493 aa9.08□□□□□ -0.96
SPIDR-228ENST00000588781 RSPH6AQ9H0K4 717 aa9.07□□□□□ -0.96
SPIDR-228ENST00000588781 POLKQ9UBT6 870 aa9.07□□□□□ -0.96
SPIDR-228ENST00000588781 RGS17Q9UGC6 210 aaPredicted RBP9.07□□□□□ -0.96
SPIDR-228ENST00000588781 ITSN1Q15811 1721 aa9.07□□□□□ -0.96
SPIDR-228ENST00000588781 CEP170BQ9Y4F5 1589 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms