RNA–Protein interactions for RNA: ENST00000588770.5

LAMA3-210, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best)

Gene LAMA3, Length 4,921 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-210ENST00000588770 SGSM3Q96HU1 749 aa9.34□□□□□ -0.91
LAMA3-210ENST00000588770 HDAC1Q13547 482 aaPredicted RBP9.34□□□□□ -0.92
LAMA3-210ENST00000588770 FOXD4L5Q5VV16 416 aaPredicted RBP9.34□□□□□ -0.92
LAMA3-210ENST00000588770 FMNL3Q8IVF7 1028 aa9.34□□□□□ -0.92
LAMA3-210ENST00000588770 FOXD4L4Q8WXT5 416 aaPredicted RBP9.34□□□□□ -0.92
LAMA3-210ENST00000588770 PIBF1Q8WXW3 757 aa9.33□□□□□ -0.92
LAMA3-210ENST00000588770 U2SURPO15042 1029 aaKnown RBP9.33□□□□□ -0.92
LAMA3-210ENST00000588770 VPS8Q8N3P4 1428 aa9.33□□□□□ -0.92
LAMA3-210ENST00000588770 PPM1EQ8WY54 764 aa9.33□□□□□ -0.92
LAMA3-210ENST00000588770 A0A0G2JS52 829 aa9.32□□□□□ -0.92
LAMA3-210ENST00000588770 SYT10Q6XYQ8 523 aa9.32□□□□□ -0.92
LAMA3-210ENST00000588770 SOGA1O94964 1423 aa9.32□□□□□ -0.92
LAMA3-210ENST00000588770 CNTLNQ9NXG0 1405 aa9.32□□□□□ -0.92
LAMA3-210ENST00000588770 MCTP2Q6DN12 878 aa9.32□□□□□ -0.92
LAMA3-210ENST00000588770 FAM184AQ8NB25 1140 aa9.32□□□□□ -0.92
LAMA3-210ENST00000588770 TSPY26PQ9H489 355 aa9.32□□□□□ -0.92
LAMA3-210ENST00000588770 ANTXR1Q9H6X2 564 aa9.32□□□□□ -0.92
LAMA3-210ENST00000588770 FAM210AQ96ND0 272 aa9.32□□□□□ -0.92
LAMA3-210ENST00000588770 BSDC1Q9NW68 430 aaPredicted RBP9.32□□□□□ -0.92
LAMA3-210ENST00000588770 DDX41Q9UJV9 622 aaKnown RBP9.32□□□□□ -0.92
LAMA3-210ENST00000588770 REC8O95072 547 aa9.32□□□□□ -0.92
LAMA3-210ENST00000588770 IVLP07476 585 aa9.32□□□□□ -0.92
LAMA3-210ENST00000588770 ATP2B1P20020 1258 aa9.32□□□□□ -0.92
LAMA3-210ENST00000588770 GYS2P54840 703 aa9.32□□□□□ -0.92
LAMA3-210ENST00000588770 NPHP1O15259 732 aa9.31□□□□□ -0.92
LAMA3-210ENST00000588770 MAFGO15525 162 aa9.31□□□□□ -0.92
LAMA3-210ENST00000588770 NOP2P46087 812 aaKnown RBP9.31□□□□□ -0.92
LAMA3-210ENST00000588770 GBP6Q6ZN66 633 aa9.31□□□□□ -0.92
LAMA3-210ENST00000588770 CCDC34Q96HJ3 373 aa9.31□□□□□ -0.92
LAMA3-210ENST00000588770 ZSCAN26Q16670 478 aa9.31□□□□□ -0.92
LAMA3-210ENST00000588770 CARD11Q9BXL7 1154 aa9.31□□□□□ -0.92
LAMA3-210ENST00000588770 NF2P35240 595 aa9.31□□□□□ -0.92
LAMA3-210ENST00000588770 RNF20Q5VTR2 975 aa9.31□□□□□ -0.92
LAMA3-210ENST00000588770 RTF1Q92541 710 aaKnown RBP9.31□□□□□ -0.92
LAMA3-210ENST00000588770 ZRSR2Q15696 482 aaKnown RBP9.31□□□□□ -0.92
LAMA3-210ENST00000588770 SMC2O95347 1197 aa9.3□□□□□ -0.92
LAMA3-210ENST00000588770 ZSCAN23Q3MJ62 389 aa9.3□□□□□ -0.92
LAMA3-210ENST00000588770 JAKMIP3Q5VZ66 844 aa9.3□□□□□ -0.92
LAMA3-210ENST00000588770 NEK11Q8NG66 645 aa9.3□□□□□ -0.92
LAMA3-210ENST00000588770 PES1O00541 588 aaKnown RBP9.3□□□□□ -0.92
LAMA3-210ENST00000588770 TPD52L1Q16890 204 aaPredicted RBP9.3□□□□□ -0.92
LAMA3-210ENST00000588770 RRP15Q9Y3B9 282 aaKnown RBP9.3□□□□□ -0.92
LAMA3-210ENST00000588770 LMAN1P49257 510 aa9.29□□□□□ -0.92
LAMA3-210ENST00000588770 DYDC1Q8WWB3 177 aa9.29□□□□□ -0.92
LAMA3-210ENST00000588770 RBSNQ9H1K0 784 aa9.29□□□□□ -0.92
LAMA3-210ENST00000588770 CTAGE5O15320 804 aa9.29□□□□□ -0.92
LAMA3-210ENST00000588770 HMMRO75330 724 aa9.29□□□□□ -0.92
LAMA3-210ENST00000588770 ERCC4Q92889 916 aaPredicted RBP9.29□□□□□ -0.92
LAMA3-210ENST00000588770 MORC2Q9Y6X9 1032 aaPredicted RBP9.29□□□□□ -0.92
LAMA3-210ENST00000588770 RWDD1Q9H446 243 aaPredicted RBP9.29□□□□□ -0.92
LAMA3-210ENST00000588770 FOXD4L6Q3SYB3 417 aaPredicted RBP9.28□□□□□ -0.92
LAMA3-210ENST00000588770 C20orf194Q5TEA3 1177 aa9.28□□□□□ -0.92
LAMA3-210ENST00000588770 FOXD4L3Q6VB84 417 aaPredicted RBP9.28□□□□□ -0.92
LAMA3-210ENST00000588770 TBC1D32Q96NH3 1257 aa9.28□□□□□ -0.92
LAMA3-210ENST00000588770 CTNNA3Q9UI47 895 aa9.28□□□□□ -0.92
LAMA3-210ENST00000588770 CEP164Q9UPV0 1460 aa9.28□□□□□ -0.92
LAMA3-210ENST00000588770 SYCE3A1L190 88 aa9.28□□□□□ -0.92
LAMA3-210ENST00000588770 TRIM66O15016 1216 aa9.28□□□□□ -0.92
LAMA3-210ENST00000588770 KIF18AQ8NI77 898 aa9.28□□□□□ -0.92
LAMA3-210ENST00000588770 PPP6R1Q9UPN7 881 aa9.28□□□□□ -0.92
LAMA3-210ENST00000588770 RBBP5Q15291 538 aaKnown RBP9.28□□□□□ -0.92
LAMA3-210ENST00000588770 CC2D2BQ6DHV5 1058 aa9.28□□□□□ -0.92
LAMA3-210ENST00000588770 RPUSD2Q8IZ73 545 aaKnown RBP9.28□□□□□ -0.92
LAMA3-210ENST00000588770 GTF3C6Q969F1 213 aa9.28□□□□□ -0.92
LAMA3-210ENST00000588770 ITFG2Q969R8 447 aa9.28□□□□□ -0.92
LAMA3-210ENST00000588770 CLUAP1Q96AJ1 413 aa9.28□□□□□ -0.92
LAMA3-210ENST00000588770 CHMP3Q9Y3E7 222 aa9.28□□□□□ -0.92
LAMA3-210ENST00000588770 PRPF40AO75400 957 aaKnown RBP9.28□□□□□ -0.92
LAMA3-210ENST00000588770 PRIM1P49642 420 aaKnown RBP9.28□□□□□ -0.92
LAMA3-210ENST00000588770 IRX1P78414 480 aaPredicted RBP9.28□□□□□ -0.92
LAMA3-210ENST00000588770 FAM107BQ9H098 131 aa9.28□□□□□ -0.92
LAMA3-210ENST00000588770 TTC12Q9H892 705 aaPredicted RBP9.28□□□□□ -0.92
LAMA3-210ENST00000588770 GOPCQ9HD26 462 aa9.28□□□□□ -0.92
LAMA3-210ENST00000588770 SPATS2LQ9NUQ6 558 aaKnown RBP9.28□□□□□ -0.92
LAMA3-210ENST00000588770 KIF2AO00139 706 aaPredicted RBP9.27□□□□□ -0.92
LAMA3-210ENST00000588770 CT47B1P0C2W7 299 aaPredicted RBP9.27□□□□□ -0.92
LAMA3-210ENST00000588770 HSP90AB4PQ58FF6 505 aa9.27□□□□□ -0.92
LAMA3-210ENST00000588770 TMCO3Q6UWJ1 677 aa9.27□□□□□ -0.92
LAMA3-210ENST00000588770 SLC24A3Q9HC58 644 aa9.27□□□□□ -0.92
LAMA3-210ENST00000588770 ANAPC4Q9UJX5 808 aa9.27□□□□□ -0.92
LAMA3-210ENST00000588770 ZNF445P59923 1031 aa9.27□□□□□ -0.93
LAMA3-210ENST00000588770 MICALL1Q8N3F8 863 aa9.27□□□□□ -0.93
LAMA3-210ENST00000588770 DDX11Q96FC9 970 aa9.27□□□□□ -0.93
LAMA3-210ENST00000588770 PAXBP1Q9Y5B6 917 aa9.27□□□□□ -0.93
LAMA3-210ENST00000588770 MBD3O95983 291 aa9.27□□□□□ -0.93
LAMA3-210ENST00000588770 CYP2C19P33261 490 aa9.27□□□□□ -0.93
LAMA3-210ENST00000588770 SMTNL1A8MU46 457 aa9.27□□□□□ -0.93
LAMA3-210ENST00000588770 CCDC27Q2M243 656 aa9.27□□□□□ -0.93
LAMA3-210ENST00000588770 PMFBP1Q8TBY8 1022 aa9.26□□□□□ -0.93
LAMA3-210ENST00000588770 ANKRD7Q92527 254 aa9.26□□□□□ -0.93
LAMA3-210ENST00000588770 ZNF777Q9ULD5 760 aaPredicted RBP9.26□□□□□ -0.93
LAMA3-210ENST00000588770 V9GYY5 206 aaPredicted RBP9.26□□□□□ -0.93
LAMA3-210ENST00000588770 JMYQ8N9B5 988 aa9.26□□□□□ -0.93
LAMA3-210ENST00000588770 MAGEA9P43362 315 aa9.26□□□□□ -0.93
LAMA3-210ENST00000588770 WWC2Q6AWC2 1192 aa9.26□□□□□ -0.93
LAMA3-210ENST00000588770 MMS22LQ6ZRQ5 1243 aa9.26□□□□□ -0.93
LAMA3-210ENST00000588770 C17orf53Q8N3J3 647 aaPredicted RBP9.26□□□□□ -0.93
LAMA3-210ENST00000588770 ACBD3Q9H3P7 528 aa9.26□□□□□ -0.93
LAMA3-210ENST00000588770 ERCC3P19447 782 aa9.26□□□□□ -0.93
LAMA3-210ENST00000588770 CAND2O75155 1236 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms