RNA–Protein interactions for RNA: ENST00000588087.5

TMC6-209, Transcript of transmembrane channel like 6, humanhuman

TSL 2

Gene TMC6, Length 2,384 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-209ENST00000588087 HDGFL2Q7Z4V5 671 aaPredicted RBP27.59■■■□□ 2.01
TMC6-209ENST00000588087 ZKSCAN2Q63HK3 967 aa27.58■■■□□ 2.01
TMC6-209ENST00000588087 SMC4Q9NTJ3 1288 aa27.58■■■□□ 2.01
TMC6-209ENST00000588087 FAM69CQ0P6D2 419 aa27.58■■■□□ 2.01
TMC6-209ENST00000588087 MVPQ14764 893 aaKnown RBP27.58■■■□□ 2.01
TMC6-209ENST00000588087 FTSJ3Q8IY81 847 aaKnown RBP27.58■■■□□ 2.01
TMC6-209ENST00000588087 PDZRN3Q9UPQ7 1066 aa27.58■■■□□ 2.01
TMC6-209ENST00000588087 NFKBIBQ15653 356 aa27.57■■■□□ 2
TMC6-209ENST00000588087 NCBP3Q53F19 620 aaKnown RBP27.57■■■□□ 2
TMC6-209ENST00000588087 WAPLQ7Z5K2 1190 aa27.57■■■□□ 2
TMC6-209ENST00000588087 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.57■■■□□ 2
TMC6-209ENST00000588087 ALKQ9UM73 1620 aa27.57■■■□□ 2
TMC6-209ENST00000588087 RIMBP3CA6NJZ7 1639 aa27.56■■■□□ 2
TMC6-209ENST00000588087 RIMBP3BA6NNM3 1639 aa27.56■■■□□ 2
TMC6-209ENST00000588087 RIMBP3Q9UFD9 1639 aa27.56■■■□□ 2
TMC6-209ENST00000588087 DZIP1LQ8IYY4 767 aaKnown RBP27.56■■■□□ 2
TMC6-209ENST00000588087 DIAPH1O60610 1272 aaKnown RBP27.55■■■□□ 2
TMC6-209ENST00000588087 RIPK4P57078 832 aa27.55■■■□□ 2
TMC6-209ENST00000588087 SSH1Q8WYL5 1049 aa27.55■■■□□ 2
TMC6-209ENST00000588087 ARHGEF40Q8TER5 1519 aa27.54■■■□□ 2
TMC6-209ENST00000588087 AAMPQ13685 434 aa27.53■■■□□ 2
TMC6-209ENST00000588087 MLECQ14165 292 aa27.52■■■□□ 2
TMC6-209ENST00000588087 RWDD1Q9H446 243 aaPredicted RBP27.52■■■□□ 2
TMC6-209ENST00000588087 TRIM27P14373 513 aa27.52■■■□□ 2
TMC6-209ENST00000588087 MED14O60244 1454 aa27.51■■□□□ 1.99
TMC6-209ENST00000588087 CLTCQ00610 1675 aaKnown RBP27.5■■□□□ 1.99
TMC6-209ENST00000588087 CT47B1P0C2W7 299 aaPredicted RBP27.49■■□□□ 1.99
TMC6-209ENST00000588087 ITPRIPQ8IWB1 547 aa27.48■■□□□ 1.99
TMC6-209ENST00000588087 NOB1Q9ULX3 412 aaKnown RBP27.48■■□□□ 1.99
TMC6-209ENST00000588087 PNPLA6Q8IY17 1366 aa27.47■■□□□ 1.99
TMC6-209ENST00000588087 PRKAR2BP31323 418 aa27.45■■□□□ 1.98
TMC6-209ENST00000588087 ATF7IPQ6VMQ6 1270 aa27.44■■□□□ 1.98
TMC6-209ENST00000588087 POLKQ9UBT6 870 aa27.44■■□□□ 1.98
TMC6-209ENST00000588087 A2ML1A8K2U0 1454 aa27.44■■□□□ 1.98
TMC6-209ENST00000588087 IL16Q14005 1332 aa27.44■■□□□ 1.98
TMC6-209ENST00000588087 ANKRD26Q9UPS8 1709 aa27.43■■□□□ 1.98
TMC6-209ENST00000588087 RIMS2Q9UQ26 1411 aa27.43■■□□□ 1.98
TMC6-209ENST00000588087 HMOX1P09601 288 aa27.42■■□□□ 1.98
TMC6-209ENST00000588087 TMEM57Q8N5G2 664 aa27.42■■□□□ 1.98
TMC6-209ENST00000588087 VIRMAQ69YN4 1812 aaKnown RBP27.42■■□□□ 1.98
TMC6-209ENST00000588087 FRAT2O75474 233 aaPredicted RBP27.41■■□□□ 1.98
TMC6-209ENST00000588087 RSPH6AQ9H0K4 717 aa27.41■■□□□ 1.98
TMC6-209ENST00000588087 DIP2BQ9P265 1576 aa27.41■■□□□ 1.98
TMC6-209ENST00000588087 LRRC7Q96NW7 1537 aa27.41■■□□□ 1.98
TMC6-209ENST00000588087 THUMPD2Q9BTF0 503 aaKnown RBP27.4■■□□□ 1.98
TMC6-209ENST00000588087 ZRANB1Q9UGI0 708 aa27.4■■□□□ 1.98
TMC6-209ENST00000588087 FCHSD2O94868 740 aa27.4■■□□□ 1.98
TMC6-209ENST00000588087 EMILIN1Q9Y6C2 1016 aa27.4■■□□□ 1.98
TMC6-209ENST00000588087 PHACTR3Q96KR7 559 aa27.39■■□□□ 1.98
TMC6-209ENST00000588087 DDX19BQ9UMR2 479 aa27.39■■□□□ 1.98
TMC6-209ENST00000588087 NME9Q86XW9 330 aa27.38■■□□□ 1.97
TMC6-209ENST00000588087 TSPOAP1O95153 1857 aa27.38■■□□□ 1.97
TMC6-209ENST00000588087 NCKAP5LQ9HCH0 1330 aa27.38■■□□□ 1.97
TMC6-209ENST00000588087 PNNQ9H307 717 aaKnown RBP27.37■■□□□ 1.97
TMC6-209ENST00000588087 TXNDC2Q86VQ3 553 aa27.36■■□□□ 1.97
TMC6-209ENST00000588087 KIF20BQ96Q89 1820 aa27.36■■□□□ 1.97
TMC6-209ENST00000588087 UPF2Q9HAU5 1272 aaKnown RBP27.35■■□□□ 1.97
TMC6-209ENST00000588087 FAM135BQ49AJ0 1406 aa27.35■■□□□ 1.97
TMC6-209ENST00000588087 ATP7BP35670 1465 aa27.35■■□□□ 1.97
TMC6-209ENST00000588087 METP08581 1390 aa27.34■■□□□ 1.97
TMC6-209ENST00000588087 GSE1Q14687 1217 aa27.34■■□□□ 1.97
TMC6-209ENST00000588087 TBC1D32Q96NH3 1257 aa27.34■■□□□ 1.97
TMC6-209ENST00000588087 DLC1Q96QB1 1528 aa27.34■■□□□ 1.97
TMC6-209ENST00000588087 HDAC1Q13547 482 aaPredicted RBP27.34■■□□□ 1.97
TMC6-209ENST00000588087 SLKQ9H2G2 1235 aaPredicted RBP27.34■■□□□ 1.97
TMC6-209ENST00000588087 ZMYM3Q14202 1370 aa27.33■■□□□ 1.97
TMC6-209ENST00000588087 KIF16BQ96L93 1317 aa27.33■■□□□ 1.97
TMC6-209ENST00000588087 WASLO00401 505 aaPredicted RBP27.33■■□□□ 1.96
TMC6-209ENST00000588087 PPIP5K1Q6PFW1 1433 aa27.32■■□□□ 1.96
TMC6-209ENST00000588087 BECN1Q14457 450 aa27.32■■□□□ 1.96
TMC6-209ENST00000588087 SPATA31D1Q6ZQQ2 1576 aa27.32■■□□□ 1.96
TMC6-209ENST00000588087 ZBTB40Q9NUA8 1239 aa27.31■■□□□ 1.96
TMC6-209ENST00000588087 AGLP35573 1532 aa27.31■■□□□ 1.96
TMC6-209ENST00000588087 NFE2L2Q16236 605 aa27.31■■□□□ 1.96
TMC6-209ENST00000588087 PPP6R1Q9UPN7 881 aa27.3■■□□□ 1.96
TMC6-209ENST00000588087 CDC42BPGQ6DT37 1551 aa27.3■■□□□ 1.96
TMC6-209ENST00000588087 IL27Q8NEV9 243 aa27.3■■□□□ 1.96
TMC6-209ENST00000588087 IPO8O15397 1037 aaKnown RBP27.29■■□□□ 1.96
TMC6-209ENST00000588087 IL13P35225 146 aa27.28■■□□□ 1.96
TMC6-209ENST00000588087 RRS1Q15050 365 aaKnown RBP27.28■■□□□ 1.96
TMC6-209ENST00000588087 TSPYL6Q8N831 410 aa27.28■■□□□ 1.96
TMC6-209ENST00000588087 CPSF1Q10570 1443 aaKnown RBP27.27■■□□□ 1.96
TMC6-209ENST00000588087 SETD1AO15047 1707 aaKnown RBP27.27■■□□□ 1.96
TMC6-209ENST00000588087 ELL2O00472 640 aaPredicted RBP27.27■■□□□ 1.96
TMC6-209ENST00000588087 ALDH1L2Q3SY69 923 aa27.27■■□□□ 1.96
TMC6-209ENST00000588087 NUDT16Q96DE0 195 aaKnown RBP27.27■■□□□ 1.96
TMC6-209ENST00000588087 EDC4Q6P2E9 1401 aaKnown RBP27.26■■□□□ 1.96
TMC6-209ENST00000588087 REREQ9P2R6 1566 aa27.26■■□□□ 1.95
TMC6-209ENST00000588087 MFAP1P55081 439 aaKnown RBP27.26■■□□□ 1.95
TMC6-209ENST00000588087 SMC5Q8IY18 1101 aa27.26■■□□□ 1.95
TMC6-209ENST00000588087 TBC1D2Q9BYX2 928 aa27.26■■□□□ 1.95
TMC6-209ENST00000588087 VAMP4O75379 141 aa27.23■■□□□ 1.95
TMC6-209ENST00000588087 NRXN3Q9Y4C0 1643 aa27.23■■□□□ 1.95
TMC6-209ENST00000588087 CPS1P31327 1500 aa27.22■■□□□ 1.95
TMC6-209ENST00000588087 COG3Q96JB2 828 aa27.22■■□□□ 1.95
TMC6-209ENST00000588087 C1orf115Q9H7X2 142 aa27.22■■□□□ 1.95
TMC6-209ENST00000588087 MBIPQ9NS73 344 aa27.22■■□□□ 1.95
TMC6-209ENST00000588087 SPRYD3Q8NCJ5 442 aa27.21■■□□□ 1.95
TMC6-209ENST00000588087 LNPKQ9C0E8 428 aa27.21■■□□□ 1.95
TMC6-209ENST00000588087 MRPL50Q8N5N7 158 aaKnown RBP27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms