RNA–Protein interactions for RNA: ENST00000584985.5

THRA-209, Transcript of thyroid hormone receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene THRA, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THRA-209ENST00000584985 SENP3Q9H4L4 574 aaPredicted RBP28.8■■■□□ 2.2
THRA-209ENST00000584985 ITPRIPQ8IWB1 547 aa28.79■■■□□ 2.2
THRA-209ENST00000584985 VGFO15240 615 aaPredicted RBP28.78■■■□□ 2.2
THRA-209ENST00000584985 ARHGEF28Q8N1W1 1705 aaKnown RBP28.78■■■□□ 2.2
THRA-209ENST00000584985 MFAP1P55081 439 aaKnown RBP28.78■■■□□ 2.2
THRA-209ENST00000584985 C22orf23Q9BZE7 217 aa28.78■■■□□ 2.2
THRA-209ENST00000584985 ABCC3O15438 1527 aa28.77■■■□□ 2.2
THRA-209ENST00000584985 HDAC1Q13547 482 aaPredicted RBP28.77■■■□□ 2.2
THRA-209ENST00000584985 A0A1W2PP64 1363 aa28.76■■■□□ 2.2
THRA-209ENST00000584985 NOB1Q9ULX3 412 aaKnown RBP28.76■■■□□ 2.19
THRA-209ENST00000584985 ATF7IPQ6VMQ6 1270 aa28.75■■■□□ 2.19
THRA-209ENST00000584985 DDX19BQ9UMR2 479 aa28.75■■■□□ 2.19
THRA-209ENST00000584985 FAM43AQ8N2R8 423 aa28.75■■■□□ 2.19
THRA-209ENST00000584985 STK26Q9P289 416 aa28.74■■■□□ 2.19
THRA-209ENST00000584985 ABCC11Q96J66 1382 aa28.74■■■□□ 2.19
THRA-209ENST00000584985 SRPK2P78362 688 aaKnown RBP28.73■■■□□ 2.19
THRA-209ENST00000584985 CAMSAP1Q5T5Y3 1602 aa28.73■■■□□ 2.19
THRA-209ENST00000584985 NEO1Q92859 1461 aa28.72■■■□□ 2.19
THRA-209ENST00000584985 TMEM57Q8N5G2 664 aa28.71■■■□□ 2.19
THRA-209ENST00000584985 SIGLEC1Q9BZZ2 1709 aa28.7■■■□□ 2.19
THRA-209ENST00000584985 NEXMIFQ5QGS0 1516 aa28.7■■■□□ 2.18
THRA-209ENST00000584985 RIPK4P57078 832 aa28.7■■■□□ 2.18
THRA-209ENST00000584985 SMC5Q8IY18 1101 aa28.7■■■□□ 2.18
THRA-209ENST00000584985 COL3A1P02461 1466 aaPredicted RBP28.69■■■□□ 2.18
THRA-209ENST00000584985 FYB1O15117 783 aa28.69■■■□□ 2.18
THRA-209ENST00000584985 MCM4P33991 863 aa28.68■■■□□ 2.18
THRA-209ENST00000584985 L1TD1Q5T7N2 865 aaKnown RBP28.68■■■□□ 2.18
THRA-209ENST00000584985 PIK3C2BO00750 1634 aa28.67■■■□□ 2.18
THRA-209ENST00000584985 ZBTB40Q9NUA8 1239 aa28.67■■■□□ 2.18
THRA-209ENST00000584985 RAPGEF3O95398 923 aa28.66■■■□□ 2.18
THRA-209ENST00000584985 IL16Q14005 1332 aa28.66■■■□□ 2.18
THRA-209ENST00000584985 IDI1Q13907 227 aa28.65■■■□□ 2.18
THRA-209ENST00000584985 ARXQ96QS3 562 aa28.65■■■□□ 2.18
THRA-209ENST00000584985 CHMP5Q9NZZ3 219 aa28.64■■■□□ 2.18
THRA-209ENST00000584985 MINK1Q8N4C8 1332 aaPredicted RBP28.64■■■□□ 2.17
THRA-209ENST00000584985 GZF1Q9H116 711 aaPredicted RBP28.63■■■□□ 2.17
THRA-209ENST00000584985 DIAPH1O60610 1272 aaKnown RBP28.62■■■□□ 2.17
THRA-209ENST00000584985 TERF2IPQ9NYB0 399 aa28.62■■■□□ 2.17
THRA-209ENST00000584985 RICTORQ6R327 1708 aa28.62■■■□□ 2.17
THRA-209ENST00000584985 IPO8O15397 1037 aaKnown RBP28.6■■■□□ 2.17
THRA-209ENST00000584985 KIF16BQ96L93 1317 aa28.6■■■□□ 2.17
THRA-209ENST00000584985 XRCC6P12956 609 aaKnown RBP eCLIP28.59■■■□□ 2.17
THRA-209ENST00000584985 NUCB1Q02818 461 aa28.59■■■□□ 2.17
THRA-209ENST00000584985 PRAM1Q96QH2 718 aa28.59■■■□□ 2.17
THRA-209ENST00000584985 LNPKQ9C0E8 428 aa28.59■■■□□ 2.17
THRA-209ENST00000584985 GOLGA6L3A6NEY3 463 aa28.58■■■□□ 2.17
THRA-209ENST00000584985 HSCBQ8IWL3 235 aa28.58■■■□□ 2.17
THRA-209ENST00000584985 CD163L1Q9NR16 1453 aa28.57■■■□□ 2.16
THRA-209ENST00000584985 DIP2CQ9Y2E4 1556 aa28.57■■■□□ 2.16
THRA-209ENST00000584985 PRKCSHP14314 528 aaPredicted RBP28.57■■■□□ 2.16
THRA-209ENST00000584985 RRAGDQ9NQL2 400 aaPredicted RBP28.57■■■□□ 2.16
THRA-209ENST00000584985 ATAD2Q6PL18 1390 aa28.56■■■□□ 2.16
THRA-209ENST00000584985 FSD2A1L4K1 749 aa28.56■■■□□ 2.16
THRA-209ENST00000584985 TRAK2O60296 914 aa28.55■■■□□ 2.16
THRA-209ENST00000584985 EIF5BO60841 1220 aaKnown RBP28.55■■■□□ 2.16
THRA-209ENST00000584985 ARHGAP31Q2M1Z3 1444 aa28.55■■■□□ 2.16
THRA-209ENST00000584985 ALDH1L2Q3SY69 923 aa28.54■■■□□ 2.16
THRA-209ENST00000584985 ZNF692Q9BU19 519 aaPredicted RBP28.54■■■□□ 2.16
THRA-209ENST00000584985 PTPRMP28827 1452 aa28.54■■■□□ 2.16
THRA-209ENST00000584985 PNPLA6Q8IY17 1366 aa28.54■■■□□ 2.16
THRA-209ENST00000584985 CHD1LQ86WJ1 897 aa28.53■■■□□ 2.16
THRA-209ENST00000584985 PNNQ9H307 717 aaKnown RBP28.53■■■□□ 2.16
THRA-209ENST00000584985 RBM25P49756 843 aaKnown RBP28.53■■■□□ 2.16
THRA-209ENST00000584985 MED14O60244 1454 aa28.53■■■□□ 2.16
THRA-209ENST00000584985 ZFYVE9O95405 1425 aa28.53■■■□□ 2.16
THRA-209ENST00000584985 FBLN1P23142 703 aa28.52■■■□□ 2.16
THRA-209ENST00000584985 PANK2Q9BZ23 570 aa28.51■■■□□ 2.15
THRA-209ENST00000584985 ANKRD26Q9UPS8 1709 aa28.51■■■□□ 2.15
THRA-209ENST00000584985 FCHSD2O94868 740 aa28.51■■■□□ 2.15
THRA-209ENST00000584985 HDGFL2Q7Z4V5 671 aaPredicted RBP28.51■■■□□ 2.15
THRA-209ENST00000584985 CABP1Q9NZU7 370 aa28.51■■■□□ 2.15
THRA-209ENST00000584985 PRKAR2BP31323 418 aa28.5■■■□□ 2.15
THRA-209ENST00000584985 RSPH6AQ9H0K4 717 aa28.5■■■□□ 2.15
THRA-209ENST00000584985 SLC52A1Q9NWF4 448 aa28.5■■■□□ 2.15
THRA-209ENST00000584985 CDK19Q9BWU1 502 aa28.49■■■□□ 2.15
THRA-209ENST00000584985 DDIT3P35638 169 aa28.48■■■□□ 2.15
THRA-209ENST00000584985 YTHDC2Q9H6S0 1430 aaKnown RBP28.47■■■□□ 2.15
THRA-209ENST00000584985 NCOA3Q9Y6Q9 1424 aa28.47■■■□□ 2.15
THRA-209ENST00000584985 SNX21Q969T3 373 aa28.47■■■□□ 2.15
THRA-209ENST00000584985 ZBTB7BO15156 539 aaPredicted RBP28.46■■■□□ 2.15
THRA-209ENST00000584985 ANKRD45Q5TZF3 282 aa28.46■■■□□ 2.15
THRA-209ENST00000584985 THUMPD2Q9BTF0 503 aaKnown RBP28.46■■■□□ 2.15
THRA-209ENST00000584985 C1orf115Q9H7X2 142 aa28.46■■■□□ 2.15
THRA-209ENST00000584985 MYO5BQ9ULV0 1848 aa28.46■■■□□ 2.15
THRA-209ENST00000584985 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.45■■■□□ 2.15
THRA-209ENST00000584985 LRRC7Q96NW7 1537 aa28.45■■■□□ 2.15
THRA-209ENST00000584985 PHACTR3Q96KR7 559 aa28.45■■■□□ 2.14
THRA-209ENST00000584985 BMP2KLQ5H9B9 411 aa28.44■■■□□ 2.14
THRA-209ENST00000584985 POLKQ9UBT6 870 aa28.44■■■□□ 2.14
THRA-209ENST00000584985 PPIP5K1Q6PFW1 1433 aa28.44■■■□□ 2.14
THRA-209ENST00000584985 VAMP4O75379 141 aa28.43■■■□□ 2.14
THRA-209ENST00000584985 BRPF1P55201 1214 aaPredicted RBP28.43■■■□□ 2.14
THRA-209ENST00000584985 DDX11L8A8MPP1 907 aa28.43■■■□□ 2.14
THRA-209ENST00000584985 HMOX1P09601 288 aa28.43■■■□□ 2.14
THRA-209ENST00000584985 TSPYL6Q8N831 410 aa28.43■■■□□ 2.14
THRA-209ENST00000584985 CLTCQ00610 1675 aaKnown RBP28.42■■■□□ 2.14
THRA-209ENST00000584985 FAM135BQ49AJ0 1406 aa28.42■■■□□ 2.14
THRA-209ENST00000584985 MRPL50Q8N5N7 158 aaKnown RBP28.42■■■□□ 2.14
THRA-209ENST00000584985 ZNF428Q96B54 188 aa28.41■■■□□ 2.14
THRA-209ENST00000584985 KIF2CQ99661 725 aa28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms