RNA–Protein interactions for RNA: ENST00000584746.5

CUEDC1-212, Transcript of CUE domain containing 1, humanhuman

TSL 2

Gene CUEDC1, Length 2,870 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-212ENST00000584746 PMFBP1Q8TBY8 1022 aa22.96■■□□□ 1.27
CUEDC1-212ENST00000584746 RRS1Q15050 365 aaKnown RBP22.95■■□□□ 1.27
CUEDC1-212ENST00000584746 LNPKQ9C0E8 428 aa22.95■■□□□ 1.27
CUEDC1-212ENST00000584746 RWDD1Q9H446 243 aaPredicted RBP22.95■■□□□ 1.27
CUEDC1-212ENST00000584746 DIAPH1O60610 1272 aaKnown RBP22.95■■□□□ 1.26
CUEDC1-212ENST00000584746 CAMSAP1Q5T5Y3 1602 aa22.94■■□□□ 1.26
CUEDC1-212ENST00000584746 GZF1Q9H116 711 aaPredicted RBP22.94■■□□□ 1.26
CUEDC1-212ENST00000584746 FAM83GA6ND36 823 aa22.94■■□□□ 1.26
CUEDC1-212ENST00000584746 TSPYL6Q8N831 410 aa22.93■■□□□ 1.26
CUEDC1-212ENST00000584746 IQSEC2Q5JU85 1478 aa22.93■■□□□ 1.26
CUEDC1-212ENST00000584746 ANO8Q9HCE9 1232 aaPredicted RBP22.93■■□□□ 1.26
CUEDC1-212ENST00000584746 TERF2IPQ9NYB0 399 aa22.93■■□□□ 1.26
CUEDC1-212ENST00000584746 NME9Q86XW9 330 aa22.92■■□□□ 1.26
CUEDC1-212ENST00000584746 TXNDC2Q86VQ3 553 aa22.92■■□□□ 1.26
CUEDC1-212ENST00000584746 RPGRIP1LQ68CZ1 1315 aa22.92■■□□□ 1.26
CUEDC1-212ENST00000584746 FAM69CQ0P6D2 419 aa22.91■■□□□ 1.26
CUEDC1-212ENST00000584746 FOXD4L1Q9NU39 408 aa22.91■■□□□ 1.26
CUEDC1-212ENST00000584746 TBC1D2Q9BYX2 928 aa22.9■■□□□ 1.26
CUEDC1-212ENST00000584746 MYO5BQ9ULV0 1848 aa22.9■■□□□ 1.26
CUEDC1-212ENST00000584746 ATF7IPQ6VMQ6 1270 aa22.9■■□□□ 1.26
CUEDC1-212ENST00000584746 HDGFL2Q7Z4V5 671 aaPredicted RBP22.9■■□□□ 1.26
CUEDC1-212ENST00000584746 HECW2Q9P2P5 1572 aa22.89■■□□□ 1.26
CUEDC1-212ENST00000584746 UPF2Q9HAU5 1272 aaKnown RBP22.89■■□□□ 1.26
CUEDC1-212ENST00000584746 ATAD2Q6PL18 1390 aa22.88■■□□□ 1.25
CUEDC1-212ENST00000584746 APBB1O00213 710 aa22.87■■□□□ 1.25
CUEDC1-212ENST00000584746 NEXMIFQ5QGS0 1516 aa22.87■■□□□ 1.25
CUEDC1-212ENST00000584746 MLH3Q9UHC1 1453 aa22.87■■□□□ 1.25
CUEDC1-212ENST00000584746 MYO3AQ8NEV4 1616 aa22.86■■□□□ 1.25
CUEDC1-212ENST00000584746 POLKQ9UBT6 870 aa22.86■■□□□ 1.25
CUEDC1-212ENST00000584746 LMTK2Q8IWU2 1503 aa22.85■■□□□ 1.25
CUEDC1-212ENST00000584746 SETBP1Q9Y6X0 1596 aa22.85■■□□□ 1.25
CUEDC1-212ENST00000584746 KRT24Q2M2I5 525 aa22.85■■□□□ 1.25
CUEDC1-212ENST00000584746 NGEFQ8N5V2 710 aa22.85■■□□□ 1.25
CUEDC1-212ENST00000584746 ARHGEF28Q8N1W1 1705 aaKnown RBP22.85■■□□□ 1.25
CUEDC1-212ENST00000584746 CCDC27Q2M243 656 aa22.85■■□□□ 1.25
CUEDC1-212ENST00000584746 ABCC11Q96J66 1382 aa22.85■■□□□ 1.25
CUEDC1-212ENST00000584746 ZC3H13Q5T200 1668 aaKnown RBP22.85■■□□□ 1.25
CUEDC1-212ENST00000584746 YTHDC2Q9H6S0 1430 aaKnown RBP22.83■■□□□ 1.25
CUEDC1-212ENST00000584746 BECN1Q14457 450 aa22.83■■□□□ 1.25
CUEDC1-212ENST00000584746 TBC1D32Q96NH3 1257 aa22.83■■□□□ 1.25
CUEDC1-212ENST00000584746 SLC52A1Q9NWF4 448 aa22.83■■□□□ 1.25
CUEDC1-212ENST00000584746 ANKRD45Q5TZF3 282 aa22.81■■□□□ 1.24
CUEDC1-212ENST00000584746 C22orf23Q9BZE7 217 aa22.81■■□□□ 1.24
CUEDC1-212ENST00000584746 PIK3C2BO00750 1634 aa22.81■■□□□ 1.24
CUEDC1-212ENST00000584746 PLEKHG5O94827 1062 aa22.79■■□□□ 1.24
CUEDC1-212ENST00000584746 DDX19BQ9UMR2 479 aa22.79■■□□□ 1.24
CUEDC1-212ENST00000584746 NLRP1Q9C000 1473 aa22.79■■□□□ 1.24
CUEDC1-212ENST00000584746 CD163L1Q9NR16 1453 aa22.79■■□□□ 1.24
CUEDC1-212ENST00000584746 AEBP1Q8IUX7 1158 aa22.79■■□□□ 1.24
CUEDC1-212ENST00000584746 RSPH6AQ9H0K4 717 aa22.77■■□□□ 1.24
CUEDC1-212ENST00000584746 MIS18AQ9NYP9 233 aa22.77■■□□□ 1.24
CUEDC1-212ENST00000584746 DIP2CQ9Y2E4 1556 aa22.77■■□□□ 1.24
CUEDC1-212ENST00000584746 PTPRMP28827 1452 aa22.77■■□□□ 1.24
CUEDC1-212ENST00000584746 NINLQ9Y2I6 1382 aa22.77■■□□□ 1.23
CUEDC1-212ENST00000584746 ZBTB40Q9NUA8 1239 aa22.76■■□□□ 1.23
CUEDC1-212ENST00000584746 C8orf58Q8NAV2 365 aa22.76■■□□□ 1.23
CUEDC1-212ENST00000584746 MBIPQ9NS73 344 aa22.75■■□□□ 1.23
CUEDC1-212ENST00000584746 TSPOAP1O95153 1857 aa22.75■■□□□ 1.23
CUEDC1-212ENST00000584746 RBM42Q9BTD8 480 aaKnown RBP22.74■■□□□ 1.23
CUEDC1-212ENST00000584746 NEURL4Q96JN8 1562 aa22.74■■□□□ 1.23
CUEDC1-212ENST00000584746 PRKCSHP14314 528 aaPredicted RBP22.73■■□□□ 1.23
CUEDC1-212ENST00000584746 MCM10Q7L590 875 aa22.72■■□□□ 1.23
CUEDC1-212ENST00000584746 ANTXR1Q9H6X2 564 aa22.72■■□□□ 1.23
CUEDC1-212ENST00000584746 NSD2O96028 1365 aa22.72■■□□□ 1.23
CUEDC1-212ENST00000584746 COL3A1P02461 1466 aaPredicted RBP22.7■■□□□ 1.22
CUEDC1-212ENST00000584746 VAMP4O75379 141 aa22.7■■□□□ 1.22
CUEDC1-212ENST00000584746 FCHSD2O94868 740 aa22.69■■□□□ 1.22
CUEDC1-212ENST00000584746 C16orf71Q8IYS4 520 aaPredicted RBP22.69■■□□□ 1.22
CUEDC1-212ENST00000584746 NUDT16Q96DE0 195 aaKnown RBP22.68■■□□□ 1.22
CUEDC1-212ENST00000584746 METP08581 1390 aa22.68■■□□□ 1.22
CUEDC1-212ENST00000584746 IPO8O15397 1037 aaKnown RBP22.68■■□□□ 1.22
CUEDC1-212ENST00000584746 TWISTNBQ3B726 338 aaPredicted RBP22.68■■□□□ 1.22
CUEDC1-212ENST00000584746 CHD1LQ86WJ1 897 aa22.68■■□□□ 1.22
CUEDC1-212ENST00000584746 NFE2L2Q16236 605 aa22.68■■□□□ 1.22
CUEDC1-212ENST00000584746 CD2BP2O95400 341 aaKnown RBP22.67■■□□□ 1.22
CUEDC1-212ENST00000584746 SIRT2Q8IXJ6 389 aa22.67■■□□□ 1.22
CUEDC1-212ENST00000584746 NECTIN2Q92692 538 aa22.67■■□□□ 1.22
CUEDC1-212ENST00000584746 LRRC7Q96NW7 1537 aa22.67■■□□□ 1.22
CUEDC1-212ENST00000584746 SULT6B1Q6IMI4 303 aa22.67■■□□□ 1.22
CUEDC1-212ENST00000584746 HDAC1Q13547 482 aaPredicted RBP22.66■■□□□ 1.22
CUEDC1-212ENST00000584746 NUTM2GQ5VZR2 741 aa22.66■■□□□ 1.22
CUEDC1-212ENST00000584746 ESF1Q9H501 851 aaKnown RBP22.66■■□□□ 1.22
CUEDC1-212ENST00000584746 SMC5Q8IY18 1101 aa22.65■■□□□ 1.22
CUEDC1-212ENST00000584746 COG3Q96JB2 828 aa22.65■■□□□ 1.22
CUEDC1-212ENST00000584746 SLC26A8Q96RN1 970 aa22.65■■□□□ 1.22
CUEDC1-212ENST00000584746 KIF16BQ96L93 1317 aa22.65■■□□□ 1.22
CUEDC1-212ENST00000584746 ALKQ9UM73 1620 aa22.65■■□□□ 1.22
CUEDC1-212ENST00000584746 WASLO00401 505 aaPredicted RBP22.64■■□□□ 1.22
CUEDC1-212ENST00000584746 ZBTB7BO15156 539 aaPredicted RBP22.64■■□□□ 1.22
CUEDC1-212ENST00000584746 IL13P35225 146 aa22.64■■□□□ 1.22
CUEDC1-212ENST00000584746 MRPL50Q8N5N7 158 aaKnown RBP22.64■■□□□ 1.22
CUEDC1-212ENST00000584746 PPIP5K1Q6PFW1 1433 aa22.64■■□□□ 1.22
CUEDC1-212ENST00000584746 SMARCA5O60264 1052 aaPredicted RBP22.64■■□□□ 1.21
CUEDC1-212ENST00000584746 CEBPAP49715 358 aaPredicted RBP22.64■■□□□ 1.21
CUEDC1-212ENST00000584746 OTUD7AQ8TE49 926 aaPredicted RBP22.64■■□□□ 1.21
CUEDC1-212ENST00000584746 PANK2Q9BZ23 570 aa22.64■■□□□ 1.21
CUEDC1-212ENST00000584746 FOXO3O43524 673 aa22.64■■□□□ 1.21
CUEDC1-212ENST00000584746 NUCB1Q02818 461 aa22.64■■□□□ 1.21
CUEDC1-212ENST00000584746 TMEM131LA2VDJ0 1609 aa22.63■■□□□ 1.21
CUEDC1-212ENST00000584746 ADGRB2O60241 1585 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms