RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 XIRP1Q702N8 1843 aaKnown RBP12.54□□□□□ -0.4
CASC3-209ENST00000583902 PRKRIP1Q9H875 184 aaPredicted RBP12.54□□□□□ -0.4
CASC3-209ENST00000583902 ZNF335Q9H4Z2 1342 aaPredicted RBP12.54□□□□□ -0.4
CASC3-209ENST00000583902 TTC21AQ8NDW8 1320 aa12.53□□□□□ -0.4
CASC3-209ENST00000583902 A0A1W2PP64 1363 aa12.53□□□□□ -0.4
CASC3-209ENST00000583902 CD163L1Q9NR16 1453 aa12.53□□□□□ -0.4
CASC3-209ENST00000583902 AMER1Q5JTC6 1135 aaPredicted RBP12.52□□□□□ -0.41
CASC3-209ENST00000583902 PRR36Q9H6K5 1346 aa12.52□□□□□ -0.41
CASC3-209ENST00000583902 PARD3Q8TEW0 1356 aa12.52□□□□□ -0.41
CASC3-209ENST00000583902 NSD3Q9BZ95 1437 aa12.52□□□□□ -0.41
CASC3-209ENST00000583902 RGPD8O14715 1765 aaPredicted RBP12.51□□□□□ -0.41
CASC3-209ENST00000583902 PHF8Q9UPP1 1060 aa12.51□□□□□ -0.41
CASC3-209ENST00000583902 LTBP4Q8N2S1 1624 aa12.51□□□□□ -0.41
CASC3-209ENST00000583902 ANKRD26Q9UPS8 1709 aa12.51□□□□□ -0.41
CASC3-209ENST00000583902 NGDNQ8NEJ9 315 aaKnown RBP12.5□□□□□ -0.41
CASC3-209ENST00000583902 CARD14Q9BXL6 1004 aa12.5□□□□□ -0.41
CASC3-209ENST00000583902 ACEP12821 1306 aa12.5□□□□□ -0.41
CASC3-209ENST00000583902 MST1RQ04912 1400 aa12.5□□□□□ -0.41
CASC3-209ENST00000583902 C1orf167Q5SNV9 1468 aa12.5□□□□□ -0.41
CASC3-209ENST00000583902 KIF20BQ96Q89 1820 aa12.49□□□□□ -0.41
CASC3-209ENST00000583902 USP6P35125 1406 aa12.49□□□□□ -0.41
CASC3-209ENST00000583902 MYBBP1AQ9BQG0 1328 aaKnown RBP12.49□□□□□ -0.41
CASC3-209ENST00000583902 POLA2Q14181 598 aa12.49□□□□□ -0.41
CASC3-209ENST00000583902 PSME1Q06323 249 aa12.48□□□□□ -0.41
CASC3-209ENST00000583902 SSH2Q76I76 1423 aa12.47□□□□□ -0.41
CASC3-209ENST00000583902 ESCO1Q5FWF5 840 aa12.47□□□□□ -0.41
CASC3-209ENST00000583902 NLRP13Q86W25 1043 aa12.47□□□□□ -0.41
CASC3-209ENST00000583902 USP54Q70EL1 1684 aa12.47□□□□□ -0.41
CASC3-209ENST00000583902 NRKQ7Z2Y5 1582 aa12.47□□□□□ -0.41
CASC3-209ENST00000583902 NPHP3Q7Z494 1330 aa12.46□□□□□ -0.41
CASC3-209ENST00000583902 MIER1Q8N108 512 aa12.46□□□□□ -0.41
CASC3-209ENST00000583902 SLAIN2Q9P270 581 aa12.46□□□□□ -0.41
CASC3-209ENST00000583902 USP31Q70CQ4 1352 aa12.45□□□□□ -0.42
CASC3-209ENST00000583902 TTC21BQ7Z4L5 1316 aa12.45□□□□□ -0.42
CASC3-209ENST00000583902 FYB1O15117 783 aa12.45□□□□□ -0.42
CASC3-209ENST00000583902 MORC1Q86VD1 984 aa12.44□□□□□ -0.42
CASC3-209ENST00000583902 SBNO1A3KN83 1393 aa12.43□□□□□ -0.42
CASC3-209ENST00000583902 AATKQ6ZMQ8 1374 aa12.43□□□□□ -0.42
CASC3-209ENST00000583902 TOM1O60784 492 aa12.43□□□□□ -0.42
CASC3-209ENST00000583902 CC2D1BQ5T0F9 858 aaKnown RBP12.43□□□□□ -0.42
CASC3-209ENST00000583902 COG3Q96JB2 828 aa12.43□□□□□ -0.42
CASC3-209ENST00000583902 ZBTB12Q9Y330 459 aaPredicted RBP12.43□□□□□ -0.42
CASC3-209ENST00000583902 NUTM2FA1L443 756 aa12.42□□□□□ -0.42
CASC3-209ENST00000583902 PMFBP1Q8TBY8 1022 aa12.42□□□□□ -0.42
CASC3-209ENST00000583902 RBM33Q96EV2 1170 aaKnown RBP12.42□□□□□ -0.42
CASC3-209ENST00000583902 ATF5Q9Y2D1 282 aaPredicted RBP12.42□□□□□ -0.42
CASC3-209ENST00000583902 INSRP06213 1382 aa12.42□□□□□ -0.42
CASC3-209ENST00000583902 KIF24Q5T7B8 1368 aa12.42□□□□□ -0.42
CASC3-209ENST00000583902 CFAP53Q96M91 514 aa12.4□□□□□ -0.42
CASC3-209ENST00000583902 ORAI2Q96SN7 254 aa12.4□□□□□ -0.42
CASC3-209ENST00000583902 ARHGEF10O15013 1369 aa12.4□□□□□ -0.42
CASC3-209ENST00000583902 TRPM3Q9HCF6 1732 aaPredicted RBP12.4□□□□□ -0.43
CASC3-209ENST00000583902 OVOS2A0A0J9YW53 1432 aa12.39□□□□□ -0.43
CASC3-209ENST00000583902 OVOS2Q6IE36 1432 aa12.39□□□□□ -0.43
CASC3-209ENST00000583902 FOXO3O43524 673 aa12.39□□□□□ -0.43
CASC3-209ENST00000583902 PPP2R1AP30153 589 aa12.39□□□□□ -0.43
CASC3-209ENST00000583902 BRINP3Q76B58 766 aa12.39□□□□□ -0.43
CASC3-209ENST00000583902 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.39□□□□□ -0.43
CASC3-209ENST00000583902 KCNH5Q8NCM2 988 aa12.39□□□□□ -0.43
CASC3-209ENST00000583902 NHSL1Q5SYE7 1610 aa12.38□□□□□ -0.43
CASC3-209ENST00000583902 KRT28Q7Z3Y7 464 aa12.38□□□□□ -0.43
CASC3-209ENST00000583902 ABTB2Q8N961 1025 aa12.38□□□□□ -0.43
CASC3-209ENST00000583902 SOS2Q07890 1332 aaPredicted RBP12.37□□□□□ -0.43
CASC3-209ENST00000583902 MAP2P11137 1827 aaKnown RBP12.37□□□□□ -0.43
CASC3-209ENST00000583902 RBM42Q9BTD8 480 aaKnown RBP12.37□□□□□ -0.43
CASC3-209ENST00000583902 GGNBP2Q9H3C7 697 aa12.37□□□□□ -0.43
CASC3-209ENST00000583902 MRS2Q9HD23 443 aa12.37□□□□□ -0.43
CASC3-209ENST00000583902 PIK3C2AO00443 1686 aa12.37□□□□□ -0.43
CASC3-209ENST00000583902 ALS2Q96Q42 1657 aa12.37□□□□□ -0.43
CASC3-209ENST00000583902 AHDC1Q5TGY3 1603 aaPredicted RBP12.37□□□□□ -0.43
CASC3-209ENST00000583902 SMG6Q86US8 1419 aaKnown RBP12.37□□□□□ -0.43
CASC3-209ENST00000583902 PXDNQ92626 1479 aa12.36□□□□□ -0.43
CASC3-209ENST00000583902 NME9Q86XW9 330 aa12.36□□□□□ -0.43
CASC3-209ENST00000583902 TNS3Q68CZ2 1445 aa12.36□□□□□ -0.43
CASC3-209ENST00000583902 PAK3O75914 559 aaPredicted RBP12.35□□□□□ -0.43
CASC3-209ENST00000583902 NLRP6P59044 892 aa12.35□□□□□ -0.43
CASC3-209ENST00000583902 PNPLA6Q8IY17 1366 aa12.34□□□□□ -0.43
CASC3-209ENST00000583902 ABCC6O95255 1503 aa12.34□□□□□ -0.43
CASC3-209ENST00000583902 CERKQ8TCT0 537 aa12.34□□□□□ -0.43
CASC3-209ENST00000583902 NUDCQ9Y266 331 aa12.34□□□□□ -0.43
CASC3-209ENST00000583902 ROBO1Q9Y6N7 1651 aa12.34□□□□□ -0.43
CASC3-209ENST00000583902 MED1Q15648 1581 aaPredicted RBP12.34□□□□□ -0.43
CASC3-209ENST00000583902 SPATA31A3Q5VYP0 1347 aa12.34□□□□□ -0.43
CASC3-209ENST00000583902 CDK12Q9NYV4 1490 aaPredicted RBP12.34□□□□□ -0.43
CASC3-209ENST00000583902 PHRF1Q9P1Y6 1649 aaKnown RBP12.33□□□□□ -0.43
CASC3-209ENST00000583902 RTL1A6NKG5 1358 aa12.33□□□□□ -0.44
CASC3-209ENST00000583902 LRRC59Q96AG4 307 aaKnown RBP12.33□□□□□ -0.44
CASC3-209ENST00000583902 PNNQ9H307 717 aaKnown RBP12.33□□□□□ -0.44
CASC3-209ENST00000583902 USP19O94966 1318 aa12.33□□□□□ -0.44
CASC3-209ENST00000583902 SLIT3O75094 1523 aa12.32□□□□□ -0.44
CASC3-209ENST00000583902 MTHFSP49914 203 aa12.32□□□□□ -0.44
CASC3-209ENST00000583902 NGEFQ8N5V2 710 aa12.32□□□□□ -0.44
CASC3-209ENST00000583902 PNISRQ8TF01 805 aaKnown RBP12.32□□□□□ -0.44
CASC3-209ENST00000583902 MARF1Q9Y4F3 1742 aaKnown RBP12.31□□□□□ -0.44
CASC3-209ENST00000583902 POLKQ9UBT6 870 aa12.31□□□□□ -0.44
CASC3-209ENST00000583902 WDR43Q15061 677 aaKnown RBP eCLIP12.3□□□□□ -0.44
CASC3-209ENST00000583902 FLT4P35916 1363 aa12.3□□□□□ -0.44
CASC3-209ENST00000583902 UBAP1LF5GYI3 381 aa12.29□□□□□ -0.44
CASC3-209ENST00000583902 NFAT5O94916 1531 aa12.28□□□□□ -0.44
CASC3-209ENST00000583902 DIAPH1O60610 1272 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms