RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 PMFBP1Q8TBY8 1022 aa22.46■■□□□ 1.19
CDK5RAP3-228ENST00000583363 ZNF692Q9BU19 519 aaPredicted RBP22.46■■□□□ 1.19
CDK5RAP3-228ENST00000583363 QTRT2Q9H974 415 aaKnown RBP22.46■■□□□ 1.19
CDK5RAP3-228ENST00000583363 PHF8Q9UPP1 1060 aa22.46■■□□□ 1.19
CDK5RAP3-228ENST00000583363 RGPD8O14715 1765 aaPredicted RBP22.45■■□□□ 1.19
CDK5RAP3-228ENST00000583363 ORAI2Q96SN7 254 aa22.45■■□□□ 1.18
CDK5RAP3-228ENST00000583363 ACEP12821 1306 aa22.45■■□□□ 1.18
CDK5RAP3-228ENST00000583363 CD163L1Q9NR16 1453 aa22.45■■□□□ 1.18
CDK5RAP3-228ENST00000583363 RBM6P78332 1123 aaKnown RBP22.44■■□□□ 1.18
CDK5RAP3-228ENST00000583363 CPSF1Q10570 1443 aaKnown RBP22.44■■□□□ 1.18
CDK5RAP3-228ENST00000583363 A0A1W2PP64 1363 aa22.43■■□□□ 1.18
CDK5RAP3-228ENST00000583363 TOPAZ1Q8N9V7 1692 aa22.42■■□□□ 1.18
CDK5RAP3-228ENST00000583363 SOS2Q07890 1332 aaPredicted RBP22.42■■□□□ 1.18
CDK5RAP3-228ENST00000583363 ADAMTS2O95450 1211 aa22.42■■□□□ 1.18
CDK5RAP3-228ENST00000583363 NGDNQ8NEJ9 315 aaKnown RBP22.42■■□□□ 1.18
CDK5RAP3-228ENST00000583363 KNSTRNQ9Y448 316 aa22.42■■□□□ 1.18
CDK5RAP3-228ENST00000583363 POLR3AO14802 1390 aaPredicted RBP22.41■■□□□ 1.18
CDK5RAP3-228ENST00000583363 ITSN1Q15811 1721 aa22.4■■□□□ 1.18
CDK5RAP3-228ENST00000583363 NGLY1Q96IV0 654 aa22.4■■□□□ 1.18
CDK5RAP3-228ENST00000583363 KTN1Q86UP2 1357 aaKnown RBP22.38■■□□□ 1.17
CDK5RAP3-228ENST00000583363 AMER1Q5JTC6 1135 aaPredicted RBP22.37■■□□□ 1.17
CDK5RAP3-228ENST00000583363 NSD3Q9BZ95 1437 aa22.37■■□□□ 1.17
CDK5RAP3-228ENST00000583363 FOXO3O43524 673 aa22.36■■□□□ 1.17
CDK5RAP3-228ENST00000583363 COL22A1Q8NFW1 1626 aaPredicted RBP22.35■■□□□ 1.17
CDK5RAP3-228ENST00000583363 PSME1Q06323 249 aa22.35■■□□□ 1.17
CDK5RAP3-228ENST00000583363 USP6P35125 1406 aa22.33■■□□□ 1.17
CDK5RAP3-228ENST00000583363 AKAP12Q02952 1782 aa22.33■■□□□ 1.17
CDK5RAP3-228ENST00000583363 USP21Q9UK80 565 aa22.33■■□□□ 1.17
CDK5RAP3-228ENST00000583363 NPC1L1Q9UHC9 1359 aa22.33■■□□□ 1.17
CDK5RAP3-228ENST00000583363 CGNL1Q0VF96 1302 aa22.32■■□□□ 1.16
CDK5RAP3-228ENST00000583363 TTC21BQ7Z4L5 1316 aa22.32■■□□□ 1.16
CDK5RAP3-228ENST00000583363 EDC4Q6P2E9 1401 aaKnown RBP22.32■■□□□ 1.16
CDK5RAP3-228ENST00000583363 SSH2Q76I76 1423 aa22.32■■□□□ 1.16
CDK5RAP3-228ENST00000583363 FNBP4Q8N3X1 1017 aaPredicted RBP22.32■■□□□ 1.16
CDK5RAP3-228ENST00000583363 BRD4O60885 1362 aaPredicted RBP22.31■■□□□ 1.16
CDK5RAP3-228ENST00000583363 FYB1O15117 783 aa22.31■■□□□ 1.16
CDK5RAP3-228ENST00000583363 ANP32CO43423 234 aa22.31■■□□□ 1.16
CDK5RAP3-228ENST00000583363 CC2D1BQ5T0F9 858 aaKnown RBP22.31■■□□□ 1.16
CDK5RAP3-228ENST00000583363 KRT28Q7Z3Y7 464 aa22.31■■□□□ 1.16
CDK5RAP3-228ENST00000583363 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.31■■□□□ 1.16
CDK5RAP3-228ENST00000583363 TRPC5Q9UL62 973 aaPredicted RBP22.3■■□□□ 1.16
CDK5RAP3-228ENST00000583363 KIF1AQ12756 1690 aa22.3■■□□□ 1.16
CDK5RAP3-228ENST00000583363 PXDNQ92626 1479 aa22.29■■□□□ 1.16
CDK5RAP3-228ENST00000583363 MON2Q7Z3U7 1717 aa22.29■■□□□ 1.16
CDK5RAP3-228ENST00000583363 ATRNO75882 1429 aa22.29■■□□□ 1.16
CDK5RAP3-228ENST00000583363 NPHP3Q7Z494 1330 aa22.29■■□□□ 1.16
CDK5RAP3-228ENST00000583363 CNGB1Q14028 1251 aaPredicted RBP22.28■■□□□ 1.16
CDK5RAP3-228ENST00000583363 PRKRIP1Q9H875 184 aaPredicted RBP22.28■■□□□ 1.16
CDK5RAP3-228ENST00000583363 TTC21AQ8NDW8 1320 aa22.28■■□□□ 1.16
CDK5RAP3-228ENST00000583363 MARF1Q9Y4F3 1742 aaKnown RBP22.27■■□□□ 1.16
CDK5RAP3-228ENST00000583363 XPCQ01831 940 aaPredicted RBP22.26■■□□□ 1.15
CDK5RAP3-228ENST00000583363 RALBP1Q15311 655 aa22.26■■□□□ 1.15
CDK5RAP3-228ENST00000583363 NME9Q86XW9 330 aa22.26■■□□□ 1.15
CDK5RAP3-228ENST00000583363 GGNBP2Q9H3C7 697 aa22.26■■□□□ 1.15
CDK5RAP3-228ENST00000583363 NSD2O96028 1365 aa22.25■■□□□ 1.15
CDK5RAP3-228ENST00000583363 PAK3O75914 559 aaPredicted RBP22.25■■□□□ 1.15
CDK5RAP3-228ENST00000583363 MIER1Q8N108 512 aa22.25■■□□□ 1.15
CDK5RAP3-228ENST00000583363 BCL9LQ86UU0 1499 aa22.24■■□□□ 1.15
CDK5RAP3-228ENST00000583363 ZRANB1Q9UGI0 708 aa22.24■■□□□ 1.15
CDK5RAP3-228ENST00000583363 SRCAPQ6ZRS2 3230 aa22.23■■□□□ 1.15
CDK5RAP3-228ENST00000583363 EP400Q96L91 3159 aa22.23■■□□□ 1.15
CDK5RAP3-228ENST00000583363 MORC1Q86VD1 984 aa22.22■■□□□ 1.15
CDK5RAP3-228ENST00000583363 ABTB2Q8N961 1025 aa22.22■■□□□ 1.15
CDK5RAP3-228ENST00000583363 SBNO1A3KN83 1393 aa22.22■■□□□ 1.15
CDK5RAP3-228ENST00000583363 PARD3Q8TEW0 1356 aa22.22■■□□□ 1.15
CDK5RAP3-228ENST00000583363 NRKQ7Z2Y5 1582 aa22.21■■□□□ 1.15
CDK5RAP3-228ENST00000583363 COG3Q96JB2 828 aa22.2■■□□□ 1.14
CDK5RAP3-228ENST00000583363 USP31Q70CQ4 1352 aa22.2■■□□□ 1.14
CDK5RAP3-228ENST00000583363 NLRP6P59044 892 aa22.18■■□□□ 1.14
CDK5RAP3-228ENST00000583363 SPATA31A3Q5VYP0 1347 aa22.17■■□□□ 1.14
CDK5RAP3-228ENST00000583363 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.17■■□□□ 1.14
CDK5RAP3-228ENST00000583363 TRPM3Q9HCF6 1732 aaPredicted RBP22.17■■□□□ 1.14
CDK5RAP3-228ENST00000583363 NUTM2GQ5VZR2 741 aa22.16■■□□□ 1.14
CDK5RAP3-228ENST00000583363 NLRP13Q86W25 1043 aa22.16■■□□□ 1.14
CDK5RAP3-228ENST00000583363 GJD4Q96KN9 370 aaPredicted RBP22.16■■□□□ 1.14
CDK5RAP3-228ENST00000583363 KIF20BQ96Q89 1820 aa22.15■■□□□ 1.14
CDK5RAP3-228ENST00000583363 MYBBP1AQ9BQG0 1328 aaKnown RBP22.14■■□□□ 1.14
CDK5RAP3-228ENST00000583363 PPP2R1AP30153 589 aa22.14■■□□□ 1.13
CDK5RAP3-228ENST00000583363 LMOD2Q6P5Q4 547 aa22.14■■□□□ 1.13
CDK5RAP3-228ENST00000583363 OVOS2A0A0J9YW53 1432 aa22.14■■□□□ 1.13
CDK5RAP3-228ENST00000583363 OVOS2Q6IE36 1432 aa22.14■■□□□ 1.13
CDK5RAP3-228ENST00000583363 TNNT2P45379 298 aaPredicted RBP22.13■■□□□ 1.13
CDK5RAP3-228ENST00000583363 GLI3P10071 1580 aa22.12■■□□□ 1.13
CDK5RAP3-228ENST00000583363 SLIT2O94813 1529 aa22.12■■□□□ 1.13
CDK5RAP3-228ENST00000583363 PIK3C2AO00443 1686 aa22.12■■□□□ 1.13
CDK5RAP3-228ENST00000583363 TNS3Q68CZ2 1445 aa22.12■■□□□ 1.13
CDK5RAP3-228ENST00000583363 CCER2I3L3R5 266 aa22.11■■□□□ 1.13
CDK5RAP3-228ENST00000583363 ANKRD26Q9UPS8 1709 aa22.11■■□□□ 1.13
CDK5RAP3-228ENST00000583363 FBLN1P23142 703 aa22.1■■□□□ 1.13
CDK5RAP3-228ENST00000583363 UNC5CLQ8IV45 518 aa22.1■■□□□ 1.13
CDK5RAP3-228ENST00000583363 ARHGEF10O15013 1369 aa22.1■■□□□ 1.13
CDK5RAP3-228ENST00000583363 CCDC125Q86Z20 511 aa22.09■■□□□ 1.13
CDK5RAP3-228ENST00000583363 ALS2Q96Q42 1657 aa22.09■■□□□ 1.13
CDK5RAP3-228ENST00000583363 AATKQ6ZMQ8 1374 aa22.08■■□□□ 1.12
CDK5RAP3-228ENST00000583363 BRWD3Q6RI45 1802 aa22.08■■□□□ 1.12
CDK5RAP3-228ENST00000583363 USP19O94966 1318 aa22.07■■□□□ 1.12
CDK5RAP3-228ENST00000583363 KCNH5Q8NCM2 988 aa22.07■■□□□ 1.12
CDK5RAP3-228ENST00000583363 MTHFSP49914 203 aa22.06■■□□□ 1.12
CDK5RAP3-228ENST00000583363 CCDC184Q52MB2 194 aa22.06■■□□□ 1.12
CDK5RAP3-228ENST00000583363 POLKQ9UBT6 870 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms