RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 LRRC59Q96AG4 307 aaKnown RBP20.96■□□□□ 0.95
MKS1-210ENST00000581180 SPATA31A3Q5VYP0 1347 aa20.96■□□□□ 0.95
MKS1-210ENST00000581180 TERF2IPQ9NYB0 399 aa20.95■□□□□ 0.94
MKS1-210ENST00000581180 KTN1Q86UP2 1357 aaKnown RBP20.95■□□□□ 0.94
MKS1-210ENST00000581180 TNS3Q68CZ2 1445 aa20.95■□□□□ 0.94
MKS1-210ENST00000581180 HDGFL2Q7Z4V5 671 aaPredicted RBP20.94■□□□□ 0.94
MKS1-210ENST00000581180 COL22A1Q8NFW1 1626 aaPredicted RBP20.93■□□□□ 0.94
MKS1-210ENST00000581180 PNPLA6Q8IY17 1366 aa20.92■□□□□ 0.94
MKS1-210ENST00000581180 JCADQ9P266 1359 aa20.92■□□□□ 0.94
MKS1-210ENST00000581180 EDC4Q6P2E9 1401 aaKnown RBP20.91■□□□□ 0.94
MKS1-210ENST00000581180 TTC21BQ7Z4L5 1316 aa20.91■□□□□ 0.94
MKS1-210ENST00000581180 PIK3C2AO00443 1686 aa20.9■□□□□ 0.94
MKS1-210ENST00000581180 CRYBG1Q9Y4K1 1723 aa20.9■□□□□ 0.94
MKS1-210ENST00000581180 PAK3O75914 559 aaPredicted RBP20.89■□□□□ 0.93
MKS1-210ENST00000581180 CARD14Q9BXL6 1004 aa20.89■□□□□ 0.93
MKS1-210ENST00000581180 MARF1Q9Y4F3 1742 aaKnown RBP20.89■□□□□ 0.93
MKS1-210ENST00000581180 ARHGEF10O15013 1369 aa20.88■□□□□ 0.93
MKS1-210ENST00000581180 TTC21AQ8NDW8 1320 aa20.88■□□□□ 0.93
MKS1-210ENST00000581180 USP54Q70EL1 1684 aa20.88■□□□□ 0.93
MKS1-210ENST00000581180 ABCA3Q99758 1704 aa20.87■□□□□ 0.93
MKS1-210ENST00000581180 PANK3Q9H999 370 aa20.87■□□□□ 0.93
MKS1-210ENST00000581180 MED1Q15648 1581 aaPredicted RBP20.87■□□□□ 0.93
MKS1-210ENST00000581180 KIF20BQ96Q89 1820 aa20.87■□□□□ 0.93
MKS1-210ENST00000581180 NSD3Q9BZ95 1437 aa20.85■□□□□ 0.93
MKS1-210ENST00000581180 LMOD2Q6P5Q4 547 aa20.84■□□□□ 0.93
MKS1-210ENST00000581180 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.84■□□□□ 0.93
MKS1-210ENST00000581180 ABTB2Q8N961 1025 aa20.84■□□□□ 0.93
MKS1-210ENST00000581180 ZNF316A6NFI3 1004 aaPredicted RBP20.83■□□□□ 0.93
MKS1-210ENST00000581180 USP31Q70CQ4 1352 aa20.83■□□□□ 0.92
MKS1-210ENST00000581180 PHRF1Q9P1Y6 1649 aaKnown RBP20.82■□□□□ 0.92
MKS1-210ENST00000581180 SPATA31A6Q5VVP1 1343 aa20.82■□□□□ 0.92
MKS1-210ENST00000581180 NME9Q86XW9 330 aa20.82■□□□□ 0.92
MKS1-210ENST00000581180 NUTM2GQ5VZR2 741 aa20.81■□□□□ 0.92
MKS1-210ENST00000581180 USP19O94966 1318 aa20.8■□□□□ 0.92
MKS1-210ENST00000581180 PER1O15534 1290 aaPredicted RBP20.8■□□□□ 0.92
MKS1-210ENST00000581180 ZRANB1Q9UGI0 708 aa20.8■□□□□ 0.92
MKS1-210ENST00000581180 SLIT3O75094 1523 aa20.79■□□□□ 0.92
MKS1-210ENST00000581180 LRP6O75581 1613 aa20.79■□□□□ 0.92
MKS1-210ENST00000581180 ANKRD26Q9UPS8 1709 aa20.79■□□□□ 0.92
MKS1-210ENST00000581180 FYB1O15117 783 aa20.79■□□□□ 0.92
MKS1-210ENST00000581180 NLRP6P59044 892 aa20.79■□□□□ 0.92
MKS1-210ENST00000581180 NLRP13Q86W25 1043 aa20.79■□□□□ 0.92
MKS1-210ENST00000581180 OVOS2A0A0J9YW53 1432 aa20.78■□□□□ 0.92
MKS1-210ENST00000581180 OVOS2Q6IE36 1432 aa20.78■□□□□ 0.92
MKS1-210ENST00000581180 CABLES1Q8TDN4 633 aa20.78■□□□□ 0.92
MKS1-210ENST00000581180 CGNL1Q0VF96 1302 aa20.76■□□□□ 0.91
MKS1-210ENST00000581180 NUTM2BA6NNL0 878 aaPredicted RBP20.74■□□□□ 0.91
MKS1-210ENST00000581180 NUTM2EB1AL46 878 aaPredicted RBP20.74■□□□□ 0.91
MKS1-210ENST00000581180 PLEKHG5O94827 1062 aa20.74■□□□□ 0.91
MKS1-210ENST00000581180 AMER1Q5JTC6 1135 aaPredicted RBP20.74■□□□□ 0.91
MKS1-210ENST00000581180 NUTM2AQ8IVF1 878 aaPredicted RBP20.74■□□□□ 0.91
MKS1-210ENST00000581180 GGNBP2Q9H3C7 697 aa20.74■□□□□ 0.91
MKS1-210ENST00000581180 KNSTRNQ9Y448 316 aa20.74■□□□□ 0.91
MKS1-210ENST00000581180 NFAT5O94916 1531 aa20.73■□□□□ 0.91
MKS1-210ENST00000581180 GCP02774 474 aa20.72■□□□□ 0.91
MKS1-210ENST00000581180 DDX10Q13206 875 aaKnown RBP20.72■□□□□ 0.91
MKS1-210ENST00000581180 NSD2O96028 1365 aa20.72■□□□□ 0.91
MKS1-210ENST00000581180 COG3Q96JB2 828 aa20.71■□□□□ 0.91
MKS1-210ENST00000581180 LTN1O94822 1766 aa20.7■□□□□ 0.9
MKS1-210ENST00000581180 NPC1L1Q9UHC9 1359 aa20.7■□□□□ 0.9
MKS1-210ENST00000581180 MAP2P11137 1827 aaKnown RBP20.69■□□□□ 0.9
MKS1-210ENST00000581180 KCNH5Q8NCM2 988 aa20.69■□□□□ 0.9
MKS1-210ENST00000581180 COL18A1P39060 1754 aa20.68■□□□□ 0.9
MKS1-210ENST00000581180 ADAMTS2O95450 1211 aa20.68■□□□□ 0.9
MKS1-210ENST00000581180 HAP1P54257 671 aaPredicted RBP20.68■□□□□ 0.9
MKS1-210ENST00000581180 CPDO75976 1380 aa20.68■□□□□ 0.9
MKS1-210ENST00000581180 COL14A1Q05707 1796 aaKnown RBP20.67■□□□□ 0.9
MKS1-210ENST00000581180 KIAA0232Q92628 1395 aa20.66■□□□□ 0.9
MKS1-210ENST00000581180 PLCH1Q4KWH8 1693 aa20.66■□□□□ 0.9
MKS1-210ENST00000581180 RGPD5Q99666 1765 aa20.65■□□□□ 0.9
MKS1-210ENST00000581180 ZC3H6P61129 1189 aaKnown RBP20.65■□□□□ 0.9
MKS1-210ENST00000581180 NWD2Q9ULI1 1742 aa20.64■□□□□ 0.9
MKS1-210ENST00000581180 LMO7Q8WWI1 1683 aa20.64■□□□□ 0.9
MKS1-210ENST00000581180 FAM83GA6ND36 823 aa20.64■□□□□ 0.89
MKS1-210ENST00000581180 SOX12O15370 315 aa20.64■□□□□ 0.89
MKS1-210ENST00000581180 ARHGEF25Q86VW2 580 aa20.64■□□□□ 0.89
MKS1-210ENST00000581180 FBLN1P23142 703 aa20.63■□□□□ 0.89
MKS1-210ENST00000581180 MEX3CQ5U5Q3 659 aaKnown RBP20.63■□□□□ 0.89
MKS1-210ENST00000581180 CC2D1BQ5T0F9 858 aaKnown RBP20.62■□□□□ 0.89
MKS1-210ENST00000581180 C8orf37Q96NL8 207 aa20.62■□□□□ 0.89
MKS1-210ENST00000581180 PRDM11Q9NQV5 511 aa20.62■□□□□ 0.89
MKS1-210ENST00000581180 SLIT2O94813 1529 aa20.62■□□□□ 0.89
MKS1-210ENST00000581180 AATKQ6ZMQ8 1374 aa20.61■□□□□ 0.89
MKS1-210ENST00000581180 MORC1Q86VD1 984 aa20.61■□□□□ 0.89
MKS1-210ENST00000581180 FNBP4Q8N3X1 1017 aaPredicted RBP20.61■□□□□ 0.89
MKS1-210ENST00000581180 ABCC6O95255 1503 aa20.61■□□□□ 0.89
MKS1-210ENST00000581180 NRAPQ86VF7 1730 aa20.61■□□□□ 0.89
MKS1-210ENST00000581180 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.61■□□□□ 0.89
MKS1-210ENST00000581180 CHRNA2Q15822 529 aa20.6■□□□□ 0.89
MKS1-210ENST00000581180 PEAK1Q9H792 1746 aa20.6■□□□□ 0.89
MKS1-210ENST00000581180 MAP3K19Q56UN5 1328 aa20.59■□□□□ 0.89
MKS1-210ENST00000581180 CAMTA1Q9Y6Y1 1673 aa20.59■□□□□ 0.89
MKS1-210ENST00000581180 NGLY1Q96IV0 654 aa20.59■□□□□ 0.89
MKS1-210ENST00000581180 AFF2P51816 1311 aa20.57■□□□□ 0.88
MKS1-210ENST00000581180 BCL9LQ86UU0 1499 aa20.57■□□□□ 0.88
MKS1-210ENST00000581180 RRS1Q15050 365 aaKnown RBP20.57■□□□□ 0.88
MKS1-210ENST00000581180 TNNT2P45379 298 aaPredicted RBP20.56■□□□□ 0.88
MKS1-210ENST00000581180 ZBTB7CA1YPR0 619 aa20.55■□□□□ 0.88
MKS1-210ENST00000581180 BTG4Q9NY30 223 aa20.55■□□□□ 0.88
MKS1-210ENST00000581180 POLKQ9UBT6 870 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms