RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 TTC21BQ7Z4L5 1316 aa19.52■□□□□ 0.72
SKA2-205ENST00000580541 AKAP12Q02952 1782 aa19.52■□□□□ 0.72
SKA2-205ENST00000580541 ABTB2Q8N961 1025 aa19.52■□□□□ 0.72
SKA2-205ENST00000580541 PER1O15534 1290 aaPredicted RBP19.51■□□□□ 0.71
SKA2-205ENST00000580541 XPCQ01831 940 aaPredicted RBP19.51■□□□□ 0.71
SKA2-205ENST00000580541 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.51■□□□□ 0.71
SKA2-205ENST00000580541 FBXO41Q8TF61 875 aa19.51■□□□□ 0.71
SKA2-205ENST00000580541 LMOD2Q6P5Q4 547 aa19.5■□□□□ 0.71
SKA2-205ENST00000580541 DDX17Q92841 729 aaKnown RBP19.5■□□□□ 0.71
SKA2-205ENST00000580541 NSD3Q9BZ95 1437 aa19.5■□□□□ 0.71
SKA2-205ENST00000580541 NLRP13Q86W25 1043 aa19.49■□□□□ 0.71
SKA2-205ENST00000580541 AHDC1Q5TGY3 1603 aaPredicted RBP19.49■□□□□ 0.71
SKA2-205ENST00000580541 ARHGEF10O15013 1369 aa19.48■□□□□ 0.71
SKA2-205ENST00000580541 SPATA31A3Q5VYP0 1347 aa19.48■□□□□ 0.71
SKA2-205ENST00000580541 MON2Q7Z3U7 1717 aa19.48■□□□□ 0.71
SKA2-205ENST00000580541 NHSL1Q5SYE7 1610 aa19.47■□□□□ 0.71
SKA2-205ENST00000580541 NSD2O96028 1365 aa19.47■□□□□ 0.71
SKA2-205ENST00000580541 NLRP6P59044 892 aa19.47■□□□□ 0.71
SKA2-205ENST00000580541 COG3Q96JB2 828 aa19.47■□□□□ 0.71
SKA2-205ENST00000580541 SSH2Q76I76 1423 aa19.47■□□□□ 0.71
SKA2-205ENST00000580541 PXDNQ92626 1479 aa19.47■□□□□ 0.71
SKA2-205ENST00000580541 FYB1O15117 783 aa19.46■□□□□ 0.71
SKA2-205ENST00000580541 NPC1L1Q9UHC9 1359 aa19.45■□□□□ 0.7
SKA2-205ENST00000580541 PHLPP1O60346 1717 aa19.45■□□□□ 0.7
SKA2-205ENST00000580541 TNS3Q68CZ2 1445 aa19.44■□□□□ 0.7
SKA2-205ENST00000580541 AMER1Q5JTC6 1135 aaPredicted RBP19.44■□□□□ 0.7
SKA2-205ENST00000580541 NME9Q86XW9 330 aa19.43■□□□□ 0.7
SKA2-205ENST00000580541 MORC1Q86VD1 984 aa19.42■□□□□ 0.7
SKA2-205ENST00000580541 KCNH5Q8NCM2 988 aa19.42■□□□□ 0.7
SKA2-205ENST00000580541 GGNBP2Q9H3C7 697 aa19.42■□□□□ 0.7
SKA2-205ENST00000580541 USP31Q70CQ4 1352 aa19.42■□□□□ 0.7
SKA2-205ENST00000580541 TRPM3Q9HCF6 1732 aaPredicted RBP19.4■□□□□ 0.7
SKA2-205ENST00000580541 ANP32CO43423 234 aa19.4■□□□□ 0.7
SKA2-205ENST00000580541 HSPA1LP34931 641 aa19.4■□□□□ 0.7
SKA2-205ENST00000580541 HAP1P54257 671 aaPredicted RBP19.4■□□□□ 0.7
SKA2-205ENST00000580541 CC2D1BQ5T0F9 858 aaKnown RBP19.4■□□□□ 0.7
SKA2-205ENST00000580541 RALBP1Q15311 655 aa19.39■□□□□ 0.69
SKA2-205ENST00000580541 NUTM2GQ5VZR2 741 aa19.39■□□□□ 0.69
SKA2-205ENST00000580541 DIEXFQ68CQ4 756 aaKnown RBP19.39■□□□□ 0.69
SKA2-205ENST00000580541 JCADQ9P266 1359 aa19.39■□□□□ 0.69
SKA2-205ENST00000580541 NRKQ7Z2Y5 1582 aa19.39■□□□□ 0.69
SKA2-205ENST00000580541 KIF20BQ96Q89 1820 aa19.37■□□□□ 0.69
SKA2-205ENST00000580541 COL16A1Q07092 1604 aaPredicted RBP19.36■□□□□ 0.69
SKA2-205ENST00000580541 ALS2Q96Q42 1657 aa19.36■□□□□ 0.69
SKA2-205ENST00000580541 GCP02774 474 aa19.35■□□□□ 0.69
SKA2-205ENST00000580541 CNGB1Q14028 1251 aaPredicted RBP19.35■□□□□ 0.69
SKA2-205ENST00000580541 PNPLA6Q8IY17 1366 aa19.34■□□□□ 0.69
SKA2-205ENST00000580541 SPATA31A6Q5VVP1 1343 aa19.34■□□□□ 0.69
SKA2-205ENST00000580541 ZRANB1Q9UGI0 708 aa19.34■□□□□ 0.69
SKA2-205ENST00000580541 USP19O94966 1318 aa19.33■□□□□ 0.69
SKA2-205ENST00000580541 ILDR1Q86SU0 546 aaPredicted RBP19.33■□□□□ 0.68
SKA2-205ENST00000580541 PIK3C2AO00443 1686 aa19.33■□□□□ 0.68
SKA2-205ENST00000580541 OVOS2A0A0J9YW53 1432 aa19.33■□□□□ 0.68
SKA2-205ENST00000580541 OVOS2Q6IE36 1432 aa19.33■□□□□ 0.68
SKA2-205ENST00000580541 PLEKHG5O94827 1062 aa19.31■□□□□ 0.68
SKA2-205ENST00000580541 PRKRIP1Q9H875 184 aaPredicted RBP19.31■□□□□ 0.68
SKA2-205ENST00000580541 TNNT2P45379 298 aaPredicted RBP19.3■□□□□ 0.68
SKA2-205ENST00000580541 CABLES1Q8TDN4 633 aa19.3■□□□□ 0.68
SKA2-205ENST00000580541 ANKRD26Q9UPS8 1709 aa19.3■□□□□ 0.68
SKA2-205ENST00000580541 AATKQ6ZMQ8 1374 aa19.3■□□□□ 0.68
SKA2-205ENST00000580541 USP54Q70EL1 1684 aa19.3■□□□□ 0.68
SKA2-205ENST00000580541 SOX12O15370 315 aa19.29■□□□□ 0.68
SKA2-205ENST00000580541 MED1Q15648 1581 aaPredicted RBP19.28■□□□□ 0.68
SKA2-205ENST00000580541 SHPRHQ149N8 1683 aa19.28■□□□□ 0.68
SKA2-205ENST00000580541 COL22A1Q8NFW1 1626 aaPredicted RBP19.28■□□□□ 0.68
SKA2-205ENST00000580541 PARD3Q8TEW0 1356 aa19.28■□□□□ 0.68
SKA2-205ENST00000580541 NUTM2BA6NNL0 878 aaPredicted RBP19.27■□□□□ 0.68
SKA2-205ENST00000580541 NUTM2EB1AL46 878 aaPredicted RBP19.27■□□□□ 0.68
SKA2-205ENST00000580541 NUTM2AQ8IVF1 878 aaPredicted RBP19.27■□□□□ 0.68
SKA2-205ENST00000580541 PIAS4Q8N2W9 510 aaPredicted RBP19.27■□□□□ 0.68
SKA2-205ENST00000580541 MYBBP1AQ9BQG0 1328 aaKnown RBP19.26■□□□□ 0.67
SKA2-205ENST00000580541 SLIT3O75094 1523 aa19.26■□□□□ 0.67
SKA2-205ENST00000580541 AMPHP49418 695 aa19.26■□□□□ 0.67
SKA2-205ENST00000580541 ZC3H6P61129 1189 aaKnown RBP19.26■□□□□ 0.67
SKA2-205ENST00000580541 KIF24Q5T7B8 1368 aa19.26■□□□□ 0.67
SKA2-205ENST00000580541 ARHGEF25Q86VW2 580 aa19.25■□□□□ 0.67
SKA2-205ENST00000580541 CFAP53Q96M91 514 aa19.25■□□□□ 0.67
SKA2-205ENST00000580541 PRDM11Q9NQV5 511 aa19.25■□□□□ 0.67
SKA2-205ENST00000580541 CPDO75976 1380 aa19.24■□□□□ 0.67
SKA2-205ENST00000580541 PPM1GO15355 546 aaPredicted RBP19.24■□□□□ 0.67
SKA2-205ENST00000580541 PPP2R1AP30153 589 aa19.24■□□□□ 0.67
SKA2-205ENST00000580541 POLKQ9UBT6 870 aa19.24■□□□□ 0.67
SKA2-205ENST00000580541 ZBTB7CA1YPR0 619 aa19.23■□□□□ 0.67
SKA2-205ENST00000580541 MTHFSP49914 203 aa19.23■□□□□ 0.67
SKA2-205ENST00000580541 MEX3CQ5U5Q3 659 aaKnown RBP19.23■□□□□ 0.67
SKA2-205ENST00000580541 MAP2P11137 1827 aaKnown RBP19.23■□□□□ 0.67
SKA2-205ENST00000580541 ADAMTS2O95450 1211 aa19.22■□□□□ 0.67
SKA2-205ENST00000580541 RRS1Q15050 365 aaKnown RBP19.22■□□□□ 0.67
SKA2-205ENST00000580541 IP6K1Q92551 441 aa19.22■□□□□ 0.67
SKA2-205ENST00000580541 MAP3K19Q56UN5 1328 aa19.22■□□□□ 0.67
SKA2-205ENST00000580541 KIAA0232Q92628 1395 aa19.2■□□□□ 0.66
SKA2-205ENST00000580541 MARF1Q9Y4F3 1742 aaKnown RBP19.2■□□□□ 0.66
SKA2-205ENST00000580541 FBLN1P23142 703 aa19.2■□□□□ 0.66
SKA2-205ENST00000580541 PHRF1Q9P1Y6 1649 aaKnown RBP19.2■□□□□ 0.66
SKA2-205ENST00000580541 RTL1A6NKG5 1358 aa19.19■□□□□ 0.66
SKA2-205ENST00000580541 NGLY1Q96IV0 654 aa19.19■□□□□ 0.66
SKA2-205ENST00000580541 NFAT5O94916 1531 aa19.19■□□□□ 0.66
SKA2-205ENST00000580541 FLT4P35916 1363 aa19.19■□□□□ 0.66
SKA2-205ENST00000580541 CRYBG1Q9Y4K1 1723 aa19.18■□□□□ 0.66
SKA2-205ENST00000580541 FAM83GA6ND36 823 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms