RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 ABTB2Q8N961 1025 aa21.49■■□□□ 1.03
SLC6A4-205ENST00000579221 CD163L1Q9NR16 1453 aa21.49■■□□□ 1.03
SLC6A4-205ENST00000579221 WASHC2AQ641Q2 1341 aa21.49■■□□□ 1.03
SLC6A4-205ENST00000579221 A0A1W2PP64 1363 aa21.48■■□□□ 1.03
SLC6A4-205ENST00000579221 PNPLA6Q8IY17 1366 aa21.48■■□□□ 1.03
SLC6A4-205ENST00000579221 TTC21AQ8NDW8 1320 aa21.48■■□□□ 1.03
SLC6A4-205ENST00000579221 PANK3Q9H999 370 aa21.47■■□□□ 1.03
SLC6A4-205ENST00000579221 SPATA31A6Q5VVP1 1343 aa21.47■■□□□ 1.03
SLC6A4-205ENST00000579221 SSH2Q76I76 1423 aa21.46■■□□□ 1.03
SLC6A4-205ENST00000579221 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.46■■□□□ 1.03
SLC6A4-205ENST00000579221 NLRP13Q86W25 1043 aa21.45■■□□□ 1.02
SLC6A4-205ENST00000579221 EDC4Q6P2E9 1401 aaKnown RBP21.45■■□□□ 1.02
SLC6A4-205ENST00000579221 NUTM2BA6NNL0 878 aaPredicted RBP21.44■■□□□ 1.02
SLC6A4-205ENST00000579221 NUTM2EB1AL46 878 aaPredicted RBP21.44■■□□□ 1.02
SLC6A4-205ENST00000579221 NLRP6P59044 892 aa21.44■■□□□ 1.02
SLC6A4-205ENST00000579221 NUTM2GQ5VZR2 741 aa21.44■■□□□ 1.02
SLC6A4-205ENST00000579221 NUTM2AQ8IVF1 878 aaPredicted RBP21.44■■□□□ 1.02
SLC6A4-205ENST00000579221 CARD14Q9BXL6 1004 aa21.44■■□□□ 1.02
SLC6A4-205ENST00000579221 TRPM3Q9HCF6 1732 aaPredicted RBP21.43■■□□□ 1.02
SLC6A4-205ENST00000579221 AKAP12Q02952 1782 aa21.43■■□□□ 1.02
SLC6A4-205ENST00000579221 PLEKHG5O94827 1062 aa21.42■■□□□ 1.02
SLC6A4-205ENST00000579221 HAP1P54257 671 aaPredicted RBP21.42■■□□□ 1.02
SLC6A4-205ENST00000579221 CABLES1Q8TDN4 633 aa21.4■■□□□ 1.02
SLC6A4-205ENST00000579221 SHPRHQ149N8 1683 aa21.4■■□□□ 1.02
SLC6A4-205ENST00000579221 NME9Q86XW9 330 aa21.39■■□□□ 1.01
SLC6A4-205ENST00000579221 MYOM1P52179 1685 aa21.39■■□□□ 1.01
SLC6A4-205ENST00000579221 ZNF316A6NFI3 1004 aaPredicted RBP21.38■■□□□ 1.01
SLC6A4-205ENST00000579221 MON2Q7Z3U7 1717 aa21.38■■□□□ 1.01
SLC6A4-205ENST00000579221 NSD3Q9BZ95 1437 aa21.38■■□□□ 1.01
SLC6A4-205ENST00000579221 ALS2Q96Q42 1657 aa21.37■■□□□ 1.01
SLC6A4-205ENST00000579221 FYB1O15117 783 aa21.37■■□□□ 1.01
SLC6A4-205ENST00000579221 MEX3CQ5U5Q3 659 aaKnown RBP21.37■■□□□ 1.01
SLC6A4-205ENST00000579221 KNSTRNQ9Y448 316 aa21.37■■□□□ 1.01
SLC6A4-205ENST00000579221 COL22A1Q8NFW1 1626 aaPredicted RBP21.37■■□□□ 1.01
SLC6A4-205ENST00000579221 CGNL1Q0VF96 1302 aa21.36■■□□□ 1.01
SLC6A4-205ENST00000579221 ZRANB1Q9UGI0 708 aa21.36■■□□□ 1.01
SLC6A4-205ENST00000579221 USP31Q70CQ4 1352 aa21.36■■□□□ 1.01
SLC6A4-205ENST00000579221 ADAMTS2O95450 1211 aa21.35■■□□□ 1.01
SLC6A4-205ENST00000579221 COG3Q96JB2 828 aa21.35■■□□□ 1.01
SLC6A4-205ENST00000579221 USP19O94966 1318 aa21.34■■□□□ 1.01
SLC6A4-205ENST00000579221 GCP02774 474 aa21.34■■□□□ 1.01
SLC6A4-205ENST00000579221 KCNH5Q8NCM2 988 aa21.34■■□□□ 1.01
SLC6A4-205ENST00000579221 NRKQ7Z2Y5 1582 aa21.34■■□□□ 1.01
SLC6A4-205ENST00000579221 GGNBP2Q9H3C7 697 aa21.33■■□□□ 1.01
SLC6A4-205ENST00000579221 PER1O15534 1290 aaPredicted RBP21.32■■□□□ 1
SLC6A4-205ENST00000579221 MED1Q15648 1581 aaPredicted RBP21.31■■□□□ 1
SLC6A4-205ENST00000579221 ZC3H6P61129 1189 aaKnown RBP21.3■■□□□ 1
SLC6A4-205ENST00000579221 DDX10Q13206 875 aaKnown RBP21.3■■□□□ 1
SLC6A4-205ENST00000579221 PIK3C2AO00443 1686 aa21.3■■□□□ 1
SLC6A4-205ENST00000579221 NGLY1Q96IV0 654 aa21.29■■□□□ 1
SLC6A4-205ENST00000579221 LRP6O75581 1613 aa21.29■■□□□ 1
SLC6A4-205ENST00000579221 SOX12O15370 315 aa21.28■■□□□ 1
SLC6A4-205ENST00000579221 C8orf37Q96NL8 207 aa21.28■■□□□ 1
SLC6A4-205ENST00000579221 FAM83GA6ND36 823 aa21.26■□□□□ 0.99
SLC6A4-205ENST00000579221 PRDM11Q9NQV5 511 aa21.26■□□□□ 0.99
SLC6A4-205ENST00000579221 OVOS2A0A0J9YW53 1432 aa21.26■□□□□ 0.99
SLC6A4-205ENST00000579221 OVOS2Q6IE36 1432 aa21.26■□□□□ 0.99
SLC6A4-205ENST00000579221 NSD2O96028 1365 aa21.25■□□□□ 0.99
SLC6A4-205ENST00000579221 SLIT3O75094 1523 aa21.25■□□□□ 0.99
SLC6A4-205ENST00000579221 AMER1Q5JTC6 1135 aaPredicted RBP21.25■□□□□ 0.99
SLC6A4-205ENST00000579221 ZBTB7CA1YPR0 619 aa21.24■□□□□ 0.99
SLC6A4-205ENST00000579221 MORC1Q86VD1 984 aa21.24■□□□□ 0.99
SLC6A4-205ENST00000579221 PHF23Q9BUL5 403 aaPredicted RBP21.24■□□□□ 0.99
SLC6A4-205ENST00000579221 KIAA0232Q92628 1395 aa21.23■□□□□ 0.99
SLC6A4-205ENST00000579221 ARHGEF25Q86VW2 580 aa21.23■□□□□ 0.99
SLC6A4-205ENST00000579221 CPDO75976 1380 aa21.23■□□□□ 0.99
SLC6A4-205ENST00000579221 FNBP4Q8N3X1 1017 aaPredicted RBP21.22■□□□□ 0.99
SLC6A4-205ENST00000579221 CHRNA2Q15822 529 aa21.21■□□□□ 0.99
SLC6A4-205ENST00000579221 CC2D1BQ5T0F9 858 aaKnown RBP21.21■□□□□ 0.99
SLC6A4-205ENST00000579221 AFF2P51816 1311 aa21.21■□□□□ 0.99
SLC6A4-205ENST00000579221 PHRF1Q9P1Y6 1649 aaKnown RBP21.21■□□□□ 0.99
SLC6A4-205ENST00000579221 CRYBG1Q9Y4K1 1723 aa21.21■□□□□ 0.99
SLC6A4-205ENST00000579221 USP54Q70EL1 1684 aa21.2■□□□□ 0.98
SLC6A4-205ENST00000579221 ABCA3Q99758 1704 aa21.2■□□□□ 0.98
SLC6A4-205ENST00000579221 NPC1L1Q9UHC9 1359 aa21.2■□□□□ 0.98
SLC6A4-205ENST00000579221 FBLN1P23142 703 aa21.19■□□□□ 0.98
SLC6A4-205ENST00000579221 ZNF772Q68DY9 489 aaPredicted RBP21.19■□□□□ 0.98
SLC6A4-205ENST00000579221 USP21Q9UK80 565 aa21.19■□□□□ 0.98
SLC6A4-205ENST00000579221 KIF20BQ96Q89 1820 aa21.18■□□□□ 0.98
SLC6A4-205ENST00000579221 TNNT2P45379 298 aaPredicted RBP21.18■□□□□ 0.98
SLC6A4-205ENST00000579221 CNGB1Q14028 1251 aaPredicted RBP21.18■□□□□ 0.98
SLC6A4-205ENST00000579221 BTG4Q9NY30 223 aa21.18■□□□□ 0.98
SLC6A4-205ENST00000579221 EVA1CP58658 441 aa21.17■□□□□ 0.98
SLC6A4-205ENST00000579221 UNC5CLQ8IV45 518 aa21.17■□□□□ 0.98
SLC6A4-205ENST00000579221 AATKQ6ZMQ8 1374 aa21.17■□□□□ 0.98
SLC6A4-205ENST00000579221 MARF1Q9Y4F3 1742 aaKnown RBP21.17■□□□□ 0.98
SLC6A4-205ENST00000579221 NFAT5O94916 1531 aa21.16■□□□□ 0.98
SLC6A4-205ENST00000579221 AMPHP49418 695 aa21.16■□□□□ 0.98
SLC6A4-205ENST00000579221 MAP3K19Q56UN5 1328 aa21.15■□□□□ 0.98
SLC6A4-205ENST00000579221 RRS1Q15050 365 aaKnown RBP21.15■□□□□ 0.98
SLC6A4-205ENST00000579221 IP6K1Q92551 441 aa21.14■□□□□ 0.97
SLC6A4-205ENST00000579221 SLIT2O94813 1529 aa21.14■□□□□ 0.97
SLC6A4-205ENST00000579221 COL14A1Q05707 1796 aaKnown RBP21.13■□□□□ 0.97
SLC6A4-205ENST00000579221 QTRT2Q9H974 415 aaKnown RBP21.13■□□□□ 0.97
SLC6A4-205ENST00000579221 RGS17Q9UGC6 210 aaPredicted RBP21.13■□□□□ 0.97
SLC6A4-205ENST00000579221 AXIN2Q9Y2T1 843 aa21.13■□□□□ 0.97
SLC6A4-205ENST00000579221 POLKQ9UBT6 870 aa21.12■□□□□ 0.97
SLC6A4-205ENST00000579221 TRPC5Q9UL62 973 aaPredicted RBP21.12■□□□□ 0.97
SLC6A4-205ENST00000579221 BCL9LQ86UU0 1499 aa21.12■□□□□ 0.97
SLC6A4-205ENST00000579221 PPM1GO15355 546 aaPredicted RBP21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms