RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 RGPD8O14715 1765 aaPredicted RBP18.23■□□□□ 0.51
SRSF1-202ENST00000578430 CC2D1BQ5T0F9 858 aaKnown RBP18.23■□□□□ 0.51
SRSF1-202ENST00000578430 PHF8Q9UPP1 1060 aa18.23■□□□□ 0.51
SRSF1-202ENST00000578430 MYBBP1AQ9BQG0 1328 aaKnown RBP18.23■□□□□ 0.51
SRSF1-202ENST00000578430 C1orf167Q5SNV9 1468 aa18.22■□□□□ 0.51
SRSF1-202ENST00000578430 NGDNQ8NEJ9 315 aaKnown RBP18.22■□□□□ 0.51
SRSF1-202ENST00000578430 USP6P35125 1406 aa18.21■□□□□ 0.51
SRSF1-202ENST00000578430 MST1RQ04912 1400 aa18.21■□□□□ 0.51
SRSF1-202ENST00000578430 KIF1AQ12756 1690 aa18.19■□□□□ 0.5
SRSF1-202ENST00000578430 ESCO1Q5FWF5 840 aa18.19■□□□□ 0.5
SRSF1-202ENST00000578430 PMFBP1Q8TBY8 1022 aa18.19■□□□□ 0.5
SRSF1-202ENST00000578430 TTC21AQ8NDW8 1320 aa18.19■□□□□ 0.5
SRSF1-202ENST00000578430 SSH2Q76I76 1423 aa18.18■□□□□ 0.5
SRSF1-202ENST00000578430 FYB1O15117 783 aa18.18■□□□□ 0.5
SRSF1-202ENST00000578430 NLRP13Q86W25 1043 aa18.18■□□□□ 0.5
SRSF1-202ENST00000578430 NRKQ7Z2Y5 1582 aa18.17■□□□□ 0.5
SRSF1-202ENST00000578430 KIF20BQ96Q89 1820 aa18.17■□□□□ 0.5
SRSF1-202ENST00000578430 PPP4R3CPQ6ZMV5 832 aa18.17■□□□□ 0.5
SRSF1-202ENST00000578430 MORC1Q86VD1 984 aa18.17■□□□□ 0.5
SRSF1-202ENST00000578430 ANKRD26Q9UPS8 1709 aa18.17■□□□□ 0.5
SRSF1-202ENST00000578430 TTC21BQ7Z4L5 1316 aa18.17■□□□□ 0.5
SRSF1-202ENST00000578430 CNGB1Q14028 1251 aaPredicted RBP18.16■□□□□ 0.5
SRSF1-202ENST00000578430 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.14■□□□□ 0.49
SRSF1-202ENST00000578430 ORAI2Q96SN7 254 aa18.14■□□□□ 0.49
SRSF1-202ENST00000578430 PPP2R1AP30153 589 aa18.13■□□□□ 0.49
SRSF1-202ENST00000578430 PSME1Q06323 249 aa18.12■□□□□ 0.49
SRSF1-202ENST00000578430 GGNBP2Q9H3C7 697 aa18.12■□□□□ 0.49
SRSF1-202ENST00000578430 SLAIN2Q9P270 581 aa18.12■□□□□ 0.49
SRSF1-202ENST00000578430 COG3Q96JB2 828 aa18.11■□□□□ 0.49
SRSF1-202ENST00000578430 MRS2Q9HD23 443 aa18.11■□□□□ 0.49
SRSF1-202ENST00000578430 USP31Q70CQ4 1352 aa18.11■□□□□ 0.49
SRSF1-202ENST00000578430 NME9Q86XW9 330 aa18.1■□□□□ 0.49
SRSF1-202ENST00000578430 NPHP3Q7Z494 1330 aa18.09■□□□□ 0.49
SRSF1-202ENST00000578430 RGS17Q9UGC6 210 aaPredicted RBP18.09■□□□□ 0.49
SRSF1-202ENST00000578430 FOXO3O43524 673 aa18.08■□□□□ 0.48
SRSF1-202ENST00000578430 OVOS2A0A0J9YW53 1432 aa18.07■□□□□ 0.48
SRSF1-202ENST00000578430 OVOS2Q6IE36 1432 aa18.07■□□□□ 0.48
SRSF1-202ENST00000578430 USP54Q70EL1 1684 aa18.07■□□□□ 0.48
SRSF1-202ENST00000578430 BRINP3Q76B58 766 aa18.07■□□□□ 0.48
SRSF1-202ENST00000578430 KRT28Q7Z3Y7 464 aa18.07■□□□□ 0.48
SRSF1-202ENST00000578430 AATKQ6ZMQ8 1374 aa18.06■□□□□ 0.48
SRSF1-202ENST00000578430 SBNO1A3KN83 1393 aa18.05■□□□□ 0.48
SRSF1-202ENST00000578430 CCDC184Q52MB2 194 aa18.05■□□□□ 0.48
SRSF1-202ENST00000578430 PIK3C2AO00443 1686 aa18.05■□□□□ 0.48
SRSF1-202ENST00000578430 ROBO1Q9Y6N7 1651 aa18.05■□□□□ 0.48
SRSF1-202ENST00000578430 PAK3O75914 559 aaPredicted RBP18.04■□□□□ 0.48
SRSF1-202ENST00000578430 ABTB2Q8N961 1025 aa18.04■□□□□ 0.48
SRSF1-202ENST00000578430 TRPM3Q9HCF6 1732 aaPredicted RBP18.03■□□□□ 0.48
SRSF1-202ENST00000578430 TNNT2P45379 298 aaPredicted RBP18.03■□□□□ 0.48
SRSF1-202ENST00000578430 CFAP53Q96M91 514 aa18.03■□□□□ 0.48
SRSF1-202ENST00000578430 NLRP6P59044 892 aa18.02■□□□□ 0.48
SRSF1-202ENST00000578430 PNISRQ8TF01 805 aaKnown RBP18.02■□□□□ 0.48
SRSF1-202ENST00000578430 ZRANB1Q9UGI0 708 aa18.02■□□□□ 0.48
SRSF1-202ENST00000578430 MTHFSP49914 203 aa18.01■□□□□ 0.47
SRSF1-202ENST00000578430 PXDNQ92626 1479 aa18.01■□□□□ 0.47
SRSF1-202ENST00000578430 SMG6Q86US8 1419 aaKnown RBP18■□□□□ 0.47
SRSF1-202ENST00000578430 SOS2Q07890 1332 aaPredicted RBP17.99■□□□□ 0.47
SRSF1-202ENST00000578430 INSRP06213 1382 aa17.99■□□□□ 0.47
SRSF1-202ENST00000578430 TNS3Q68CZ2 1445 aa17.98■□□□□ 0.47
SRSF1-202ENST00000578430 NHSL1Q5SYE7 1610 aa17.98■□□□□ 0.47
SRSF1-202ENST00000578430 KCNH5Q8NCM2 988 aa17.98■□□□□ 0.47
SRSF1-202ENST00000578430 POLKQ9UBT6 870 aa17.98■□□□□ 0.47
SRSF1-202ENST00000578430 ARHGEF10O15013 1369 aa17.98■□□□□ 0.47
SRSF1-202ENST00000578430 ALS2Q96Q42 1657 aa17.98■□□□□ 0.47
SRSF1-202ENST00000578430 PNPLA6Q8IY17 1366 aa17.97■□□□□ 0.47
SRSF1-202ENST00000578430 XPCQ01831 940 aaPredicted RBP17.97■□□□□ 0.47
SRSF1-202ENST00000578430 POTEAQ6S8J7 498 aa17.97■□□□□ 0.47
SRSF1-202ENST00000578430 SPATA31A3Q5VYP0 1347 aa17.97■□□□□ 0.47
SRSF1-202ENST00000578430 MAP2P11137 1827 aaKnown RBP17.96■□□□□ 0.47
SRSF1-202ENST00000578430 KIF24Q5T7B8 1368 aa17.96■□□□□ 0.47
SRSF1-202ENST00000578430 MARF1Q9Y4F3 1742 aaKnown RBP17.96■□□□□ 0.47
SRSF1-202ENST00000578430 FAM9BQ8IZU0 186 aa17.96■□□□□ 0.47
SRSF1-202ENST00000578430 USP19O94966 1318 aa17.96■□□□□ 0.46
SRSF1-202ENST00000578430 CDK12Q9NYV4 1490 aaPredicted RBP17.95■□□□□ 0.46
SRSF1-202ENST00000578430 SLIT3O75094 1523 aa17.95■□□□□ 0.46
SRSF1-202ENST00000578430 WDR43Q15061 677 aaKnown RBP eCLIP17.95■□□□□ 0.46
SRSF1-202ENST00000578430 PHLPP1O60346 1717 aa17.95■□□□□ 0.46
SRSF1-202ENST00000578430 AHDC1Q5TGY3 1603 aaPredicted RBP17.94■□□□□ 0.46
SRSF1-202ENST00000578430 HOXD11P31277 338 aaPredicted RBP17.94■□□□□ 0.46
SRSF1-202ENST00000578430 DDX17Q92841 729 aaKnown RBP17.94■□□□□ 0.46
SRSF1-202ENST00000578430 NUTM2GQ5VZR2 741 aa17.93■□□□□ 0.46
SRSF1-202ENST00000578430 LMOD2Q6P5Q4 547 aa17.93■□□□□ 0.46
SRSF1-202ENST00000578430 NUDCQ9Y266 331 aa17.93■□□□□ 0.46
SRSF1-202ENST00000578430 COL3A1P02461 1466 aaPredicted RBP17.92■□□□□ 0.46
SRSF1-202ENST00000578430 CNKSR2Q8WXI2 1034 aa17.91■□□□□ 0.46
SRSF1-202ENST00000578430 EMILIN1Q9Y6C2 1016 aa17.91■□□□□ 0.46
SRSF1-202ENST00000578430 NFAT5O94916 1531 aa17.91■□□□□ 0.46
SRSF1-202ENST00000578430 RTL1A6NKG5 1358 aa17.91■□□□□ 0.46
SRSF1-202ENST00000578430 DIAPH1O60610 1272 aaKnown RBP17.9■□□□□ 0.46
SRSF1-202ENST00000578430 GCP02774 474 aa17.9■□□□□ 0.46
SRSF1-202ENST00000578430 RRS1Q15050 365 aaKnown RBP17.9■□□□□ 0.46
SRSF1-202ENST00000578430 MAP3K19Q56UN5 1328 aa17.9■□□□□ 0.46
SRSF1-202ENST00000578430 FLT4P35916 1363 aa17.9■□□□□ 0.46
SRSF1-202ENST00000578430 PPM1GO15355 546 aaPredicted RBP17.89■□□□□ 0.45
SRSF1-202ENST00000578430 FBLN1P23142 703 aa17.89■□□□□ 0.45
SRSF1-202ENST00000578430 LRRC59Q96AG4 307 aaKnown RBP17.89■□□□□ 0.45
SRSF1-202ENST00000578430 PHRF1Q9P1Y6 1649 aaKnown RBP17.88■□□□□ 0.45
SRSF1-202ENST00000578430 SHPRHQ149N8 1683 aa17.88■□□□□ 0.45
SRSF1-202ENST00000578430 SOX12O15370 315 aa17.87■□□□□ 0.45
SRSF1-202ENST00000578430 AMPHP49418 695 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms