RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 NEXNQ0ZGT2 675 aa14.61□□□□□ -0.07
ERBB2-206ENST00000578373 RUFY2Q8WXA3 655 aa14.61□□□□□ -0.07
ERBB2-206ENST00000578373 UPF3BQ9BZI7 483 aaKnown RBP14.6□□□□□ -0.07
ERBB2-206ENST00000578373 SPINK5Q9NQ38 1064 aaPredicted RBP14.6□□□□□ -0.07
ERBB2-206ENST00000578373 THOC2Q8NI27 1593 aaKnown RBP14.6□□□□□ -0.07
ERBB2-206ENST00000578373 RABEP1Q15276 862 aa14.6□□□□□ -0.07
ERBB2-206ENST00000578373 DDX54Q8TDD1 881 aaKnown RBP14.6□□□□□ -0.07
ERBB2-206ENST00000578373 NEUROD6Q96NK8 337 aa14.6□□□□□ -0.07
ERBB2-206ENST00000578373 EMILIN1Q9Y6C2 1016 aa14.6□□□□□ -0.07
ERBB2-206ENST00000578373 PLEKHH2Q8IVE3 1493 aa14.59□□□□□ -0.07
ERBB2-206ENST00000578373 IQGAP2Q13576 1575 aa14.59□□□□□ -0.07
ERBB2-206ENST00000578373 SEC24BO95487 1268 aa14.59□□□□□ -0.07
ERBB2-206ENST00000578373 CCAR2Q8N163 923 aaKnown RBP14.59□□□□□ -0.07
ERBB2-206ENST00000578373 LRPPRCP42704 1394 aaKnown RBP14.59□□□□□ -0.07
ERBB2-206ENST00000578373 MAGI1Q96QZ7 1491 aaPredicted RBP14.58□□□□□ -0.08
ERBB2-206ENST00000578373 ZNF608Q9ULD9 1512 aaPredicted RBP14.58□□□□□ -0.08
ERBB2-206ENST00000578373 F6X3S4 739 aa14.58□□□□□ -0.08
ERBB2-206ENST00000578373 CEBPZQ03701 1054 aaKnown RBP14.58□□□□□ -0.08
ERBB2-206ENST00000578373 ESPNB1AK53 854 aa14.58□□□□□ -0.08
ERBB2-206ENST00000578373 ABTB2Q8N961 1025 aa14.58□□□□□ -0.08
ERBB2-206ENST00000578373 HDGFL1Q5TGJ6 251 aa14.57□□□□□ -0.08
ERBB2-206ENST00000578373 SIL1Q9H173 461 aa14.57□□□□□ -0.08
ERBB2-206ENST00000578373 NKTRP30414 1462 aaKnown RBP14.57□□□□□ -0.08
ERBB2-206ENST00000578373 APPP05067 770 aa14.57□□□□□ -0.08
ERBB2-206ENST00000578373 RLBP1P12271 317 aa14.57□□□□□ -0.08
ERBB2-206ENST00000578373 LARP6Q9BRS8 491 aaKnown RBP14.57□□□□□ -0.08
ERBB2-206ENST00000578373 GNAI2P04899 355 aa14.56□□□□□ -0.08
ERBB2-206ENST00000578373 RIC3Q7Z5B4 369 aa14.56□□□□□ -0.08
ERBB2-206ENST00000578373 NME9Q86XW9 330 aa14.56□□□□□ -0.08
ERBB2-206ENST00000578373 SPC24Q8NBT2 197 aa14.56□□□□□ -0.08
ERBB2-206ENST00000578373 TTC5Q8N0Z6 440 aa14.56□□□□□ -0.08
ERBB2-206ENST00000578373 CLASRPQ8N2M8 674 aaKnown RBP14.56□□□□□ -0.08
ERBB2-206ENST00000578373 LAMC3Q9Y6N6 1575 aa14.56□□□□□ -0.08
ERBB2-206ENST00000578373 GNAI3P08754 354 aa14.56□□□□□ -0.08
ERBB2-206ENST00000578373 SSFA2P28290 1259 aa14.56□□□□□ -0.08
ERBB2-206ENST00000578373 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.56□□□□□ -0.08
ERBB2-206ENST00000578373 FAM83GA6ND36 823 aa14.56□□□□□ -0.08
ERBB2-206ENST00000578373 C8orf34Q49A92 452 aa14.56□□□□□ -0.08
ERBB2-206ENST00000578373 NLRP2Q9NX02 1062 aa14.56□□□□□ -0.08
ERBB2-206ENST00000578373 RASSF8Q8NHQ8 419 aa14.55□□□□□ -0.08
ERBB2-206ENST00000578373 GPRASP1Q5JY77 1395 aa14.55□□□□□ -0.08
ERBB2-206ENST00000578373 PES1O00541 588 aaKnown RBP14.55□□□□□ -0.08
ERBB2-206ENST00000578373 STK3Q13188 491 aa14.55□□□□□ -0.08
ERBB2-206ENST00000578373 TSHZ3Q63HK5 1081 aa14.55□□□□□ -0.08
ERBB2-206ENST00000578373 TESK2Q96S53 571 aa14.55□□□□□ -0.08
ERBB2-206ENST00000578373 IFT57Q9NWB7 429 aa14.55□□□□□ -0.08
ERBB2-206ENST00000578373 IFT140Q96RY7 1462 aa14.55□□□□□ -0.08
ERBB2-206ENST00000578373 ERC2O15083 957 aa14.55□□□□□ -0.08
ERBB2-206ENST00000578373 FCHSD2O94868 740 aa14.55□□□□□ -0.08
ERBB2-206ENST00000578373 CCDC141Q6ZP82 1450 aa14.55□□□□□ -0.08
ERBB2-206ENST00000578373 PLEKHH1Q9ULM0 1364 aa14.55□□□□□ -0.08
ERBB2-206ENST00000578373 NFE2L2Q16236 605 aa14.54□□□□□ -0.08
ERBB2-206ENST00000578373 FSD1Q9BTV5 496 aa14.54□□□□□ -0.08
ERBB2-206ENST00000578373 TPM4P67936 248 aa14.54□□□□□ -0.08
ERBB2-206ENST00000578373 CCDC30Q5VVM6 783 aa14.54□□□□□ -0.08
ERBB2-206ENST00000578373 KIF3AQ9Y496 699 aa14.54□□□□□ -0.08
ERBB2-206ENST00000578373 FBXO31Q5XUX0 539 aaPredicted RBP14.54□□□□□ -0.08
ERBB2-206ENST00000578373 FMNL2Q96PY5 1086 aa14.54□□□□□ -0.08
ERBB2-206ENST00000578373 PANK2Q9BZ23 570 aa14.53□□□□□ -0.08
ERBB2-206ENST00000578373 CPLX1O14810 134 aa14.53□□□□□ -0.08
ERBB2-206ENST00000578373 NUTM1Q86Y26 1132 aa14.53□□□□□ -0.08
ERBB2-206ENST00000578373 PER1O15534 1290 aaPredicted RBP14.53□□□□□ -0.08
ERBB2-206ENST00000578373 TNPO1Q92973 898 aaKnown RBP14.53□□□□□ -0.08
ERBB2-206ENST00000578373 DHX29Q7Z478 1369 aaKnown RBP14.53□□□□□ -0.08
ERBB2-206ENST00000578373 IDI1Q13907 227 aa14.53□□□□□ -0.08
ERBB2-206ENST00000578373 DNAJC2Q99543 621 aaKnown RBP14.52□□□□□ -0.08
ERBB2-206ENST00000578373 RBM42Q9BTD8 480 aaKnown RBP14.52□□□□□ -0.08
ERBB2-206ENST00000578373 LRRCC1Q9C099 1032 aa14.52□□□□□ -0.08
ERBB2-206ENST00000578373 DMRT2Q9Y5R5 561 aa14.52□□□□□ -0.08
ERBB2-206ENST00000578373 SYCE3A1L190 88 aa14.52□□□□□ -0.09
ERBB2-206ENST00000578373 RNF20Q5VTR2 975 aa14.52□□□□□ -0.09
ERBB2-206ENST00000578373 SYTL4Q96C24 671 aaPredicted RBP14.52□□□□□ -0.09
ERBB2-206ENST00000578373 BIVM-ERCC5R4GMW8 1640 aa14.52□□□□□ -0.09
ERBB2-206ENST00000578373 CWC27Q6UX04 472 aaKnown RBP14.52□□□□□ -0.09
ERBB2-206ENST00000578373 GDPD2Q9HCC8 539 aa14.52□□□□□ -0.09
ERBB2-206ENST00000578373 GPATCH8Q9UKJ3 1502 aaKnown RBP14.52□□□□□ -0.09
ERBB2-206ENST00000578373 SRGAP3O43295 1099 aa14.51□□□□□ -0.09
ERBB2-206ENST00000578373 DDX58O95786 925 aaKnown RBP14.51□□□□□ -0.09
ERBB2-206ENST00000578373 CT47B1P0C2W7 299 aaPredicted RBP14.51□□□□□ -0.09
ERBB2-206ENST00000578373 SASS6Q6UVJ0 657 aa14.51□□□□□ -0.09
ERBB2-206ENST00000578373 GTF2E1P29083 439 aaPredicted RBP14.51□□□□□ -0.09
ERBB2-206ENST00000578373 XPCQ01831 940 aaPredicted RBP14.51□□□□□ -0.09
ERBB2-206ENST00000578373 FERMT3Q86UX7 667 aa14.51□□□□□ -0.09
ERBB2-206ENST00000578373 CNTROBQ8N137 903 aa14.51□□□□□ -0.09
ERBB2-206ENST00000578373 RBM33Q96EV2 1170 aaKnown RBP14.51□□□□□ -0.09
ERBB2-206ENST00000578373 STK11IPQ8N1F8 1099 aa14.5□□□□□ -0.09
ERBB2-206ENST00000578373 TBC1D32Q96NH3 1257 aa14.5□□□□□ -0.09
ERBB2-206ENST00000578373 WASHC4Q2M389 1173 aa14.5□□□□□ -0.09
ERBB2-206ENST00000578373 NUDT16Q96DE0 195 aaKnown RBP14.5□□□□□ -0.09
ERBB2-206ENST00000578373 TRIM5Q9C035 493 aa14.5□□□□□ -0.09
ERBB2-206ENST00000578373 MBD3O95983 291 aa14.49□□□□□ -0.09
ERBB2-206ENST00000578373 RAPGEF4Q8WZA2 1011 aa14.49□□□□□ -0.09
ERBB2-206ENST00000578373 TSPY26PQ9H489 355 aa14.49□□□□□ -0.09
ERBB2-206ENST00000578373 SLC52A1Q9NWF4 448 aa14.49□□□□□ -0.09
ERBB2-206ENST00000578373 GAS2L2Q8NHY3 880 aa14.49□□□□□ -0.09
ERBB2-206ENST00000578373 RTEL1-TNFRSF6BF6WH68 1400 aa14.49□□□□□ -0.09
ERBB2-206ENST00000578373 HSP90AB4PQ58FF6 505 aa14.49□□□□□ -0.09
ERBB2-206ENST00000578373 SDF4Q9BRK5 362 aa14.49□□□□□ -0.09
ERBB2-206ENST00000578373 CARD14Q9BXL6 1004 aa14.49□□□□□ -0.09
ERBB2-206ENST00000578373 ATP2B1P20020 1258 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms