RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 MYH16Q9H6N6 1097 aa22.66■■□□□ 1.22
ERBB2-205ENST00000578199 TRIM35Q9UPQ4 493 aa22.66■■□□□ 1.22
ERBB2-205ENST00000578199 TXNDC2Q86VQ3 553 aa22.66■■□□□ 1.22
ERBB2-205ENST00000578199 ESF1Q9H501 851 aaKnown RBP22.65■■□□□ 1.22
ERBB2-205ENST00000578199 NCKAP5LQ9HCH0 1330 aa22.65■■□□□ 1.22
ERBB2-205ENST00000578199 DIAPH1O60610 1272 aaKnown RBP22.65■■□□□ 1.22
ERBB2-205ENST00000578199 C8orf34Q49A92 452 aa22.65■■□□□ 1.22
ERBB2-205ENST00000578199 METP08581 1390 aa22.64■■□□□ 1.22
ERBB2-205ENST00000578199 MAPK8IP3Q9UPT6 1336 aa22.64■■□□□ 1.21
ERBB2-205ENST00000578199 ADGRB2O60241 1585 aa22.64■■□□□ 1.21
ERBB2-205ENST00000578199 ZMYM3Q14202 1370 aa22.63■■□□□ 1.21
ERBB2-205ENST00000578199 FAM161AQ3B820 660 aa22.63■■□□□ 1.21
ERBB2-205ENST00000578199 ANKRD26Q9UPS8 1709 aa22.62■■□□□ 1.21
ERBB2-205ENST00000578199 RIPK4P57078 832 aa22.62■■□□□ 1.21
ERBB2-205ENST00000578199 EXOSC9Q06265 439 aaKnown RBP22.62■■□□□ 1.21
ERBB2-205ENST00000578199 ZRANB1Q9UGI0 708 aa22.61■■□□□ 1.21
ERBB2-205ENST00000578199 SETD1AO15047 1707 aaKnown RBP22.61■■□□□ 1.21
ERBB2-205ENST00000578199 PCDHB15Q9Y5E8 787 aa22.61■■□□□ 1.21
ERBB2-205ENST00000578199 MED14O60244 1454 aa22.61■■□□□ 1.21
ERBB2-205ENST00000578199 POLKQ9UBT6 870 aa22.6■■□□□ 1.21
ERBB2-205ENST00000578199 WASLO00401 505 aaPredicted RBP22.58■■□□□ 1.21
ERBB2-205ENST00000578199 LAS1LQ9Y4W2 734 aaKnown RBP22.58■■□□□ 1.21
ERBB2-205ENST00000578199 KIF20BQ96Q89 1820 aa22.58■■□□□ 1.21
ERBB2-205ENST00000578199 PNPLA6Q8IY17 1366 aa22.58■■□□□ 1.2
ERBB2-205ENST00000578199 NCBP3Q53F19 620 aaKnown RBP22.57■■□□□ 1.2
ERBB2-205ENST00000578199 NME9Q86XW9 330 aa22.57■■□□□ 1.2
ERBB2-205ENST00000578199 NRXN3Q9Y4C0 1643 aa22.57■■□□□ 1.2
ERBB2-205ENST00000578199 KIF13AQ9H1H9 1805 aa22.57■■□□□ 1.2
ERBB2-205ENST00000578199 DLC1Q96QB1 1528 aa22.57■■□□□ 1.2
ERBB2-205ENST00000578199 SLC4A3P48751 1232 aa22.57■■□□□ 1.2
ERBB2-205ENST00000578199 HMOX1P09601 288 aa22.56■■□□□ 1.2
ERBB2-205ENST00000578199 EMILIN1Q9Y6C2 1016 aa22.56■■□□□ 1.2
ERBB2-205ENST00000578199 SMC4Q9NTJ3 1288 aa22.55■■□□□ 1.2
ERBB2-205ENST00000578199 PPIP5K1Q6PFW1 1433 aa22.55■■□□□ 1.2
ERBB2-205ENST00000578199 PRKAR2BP31323 418 aa22.55■■□□□ 1.2
ERBB2-205ENST00000578199 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.54■■□□□ 1.2
ERBB2-205ENST00000578199 NUDT16Q96DE0 195 aaKnown RBP22.54■■□□□ 1.2
ERBB2-205ENST00000578199 SSH1Q8WYL5 1049 aa22.54■■□□□ 1.2
ERBB2-205ENST00000578199 ZKSCAN2Q63HK3 967 aa22.53■■□□□ 1.2
ERBB2-205ENST00000578199 PRKCSHP14314 528 aaPredicted RBP22.53■■□□□ 1.2
ERBB2-205ENST00000578199 ATP7BP35670 1465 aa22.52■■□□□ 1.2
ERBB2-205ENST00000578199 MAP2P11137 1827 aaKnown RBP22.52■■□□□ 1.2
ERBB2-205ENST00000578199 PHACTR3Q96KR7 559 aa22.52■■□□□ 1.2
ERBB2-205ENST00000578199 FTSJ3Q8IY81 847 aaKnown RBP22.52■■□□□ 1.19
ERBB2-205ENST00000578199 FCHSD2O94868 740 aa22.51■■□□□ 1.19
ERBB2-205ENST00000578199 RSPH6AQ9H0K4 717 aa22.51■■□□□ 1.19
ERBB2-205ENST00000578199 MVPQ14764 893 aaKnown RBP22.51■■□□□ 1.19
ERBB2-205ENST00000578199 DZIP1LQ8IYY4 767 aaKnown RBP22.51■■□□□ 1.19
ERBB2-205ENST00000578199 NUTM2FA1L443 756 aa22.5■■□□□ 1.19
ERBB2-205ENST00000578199 RRS1Q15050 365 aaKnown RBP22.5■■□□□ 1.19
ERBB2-205ENST00000578199 PLPPR3Q6T4P5 718 aa22.5■■□□□ 1.19
ERBB2-205ENST00000578199 THUMPD2Q9BTF0 503 aaKnown RBP22.5■■□□□ 1.19
ERBB2-205ENST00000578199 LRRC7Q96NW7 1537 aa22.49■■□□□ 1.19
ERBB2-205ENST00000578199 TRIM27P14373 513 aa22.49■■□□□ 1.19
ERBB2-205ENST00000578199 CPSF1Q10570 1443 aaKnown RBP22.49■■□□□ 1.19
ERBB2-205ENST00000578199 PMFBP1Q8TBY8 1022 aa22.49■■□□□ 1.19
ERBB2-205ENST00000578199 TNRQ92752 1358 aa22.49■■□□□ 1.19
ERBB2-205ENST00000578199 NOB1Q9ULX3 412 aaKnown RBP22.49■■□□□ 1.19
ERBB2-205ENST00000578199 CEBPAP49715 358 aaPredicted RBP22.48■■□□□ 1.19
ERBB2-205ENST00000578199 DDRGK1Q96HY6 314 aa22.48■■□□□ 1.19
ERBB2-205ENST00000578199 PNNQ9H307 717 aaKnown RBP22.48■■□□□ 1.19
ERBB2-205ENST00000578199 SEC24BO95487 1268 aa22.47■■□□□ 1.19
ERBB2-205ENST00000578199 CCDC61Q9Y6R9 512 aa22.47■■□□□ 1.19
ERBB2-205ENST00000578199 DEKP35659 375 aaKnown RBP22.47■■□□□ 1.19
ERBB2-205ENST00000578199 EDC4Q6P2E9 1401 aaKnown RBP22.46■■□□□ 1.19
ERBB2-205ENST00000578199 PRR36Q9H6K5 1346 aa22.46■■□□□ 1.19
ERBB2-205ENST00000578199 CPS1P31327 1500 aa22.46■■□□□ 1.19
ERBB2-205ENST00000578199 CT47B1P0C2W7 299 aaPredicted RBP22.46■■□□□ 1.19
ERBB2-205ENST00000578199 PDZRN3Q9UPQ7 1066 aa22.46■■□□□ 1.19
ERBB2-205ENST00000578199 IL16Q14005 1332 aa22.45■■□□□ 1.18
ERBB2-205ENST00000578199 HDGFP51858 240 aaKnown RBP22.45■■□□□ 1.18
ERBB2-205ENST00000578199 IL13P35225 146 aa22.45■■□□□ 1.18
ERBB2-205ENST00000578199 ITPRIPQ8IWB1 547 aa22.45■■□□□ 1.18
ERBB2-205ENST00000578199 FAM135BQ49AJ0 1406 aa22.44■■□□□ 1.18
ERBB2-205ENST00000578199 LTKP29376 864 aa22.44■■□□□ 1.18
ERBB2-205ENST00000578199 ROBO2Q9HCK4 1378 aa22.44■■□□□ 1.18
ERBB2-205ENST00000578199 TMEM2Q9UHN6 1383 aa22.44■■□□□ 1.18
ERBB2-205ENST00000578199 NEFMP07197 916 aa22.43■■□□□ 1.18
ERBB2-205ENST00000578199 ATF7IPQ6VMQ6 1270 aa22.43■■□□□ 1.18
ERBB2-205ENST00000578199 COG3Q96JB2 828 aa22.43■■□□□ 1.18
ERBB2-205ENST00000578199 RTL5Q5HYW3 569 aaPredicted RBP22.43■■□□□ 1.18
ERBB2-205ENST00000578199 RWDD1Q9H446 243 aaPredicted RBP22.43■■□□□ 1.18
ERBB2-205ENST00000578199 AAMPQ13685 434 aa22.42■■□□□ 1.18
ERBB2-205ENST00000578199 SLC26A8Q96RN1 970 aa22.41■■□□□ 1.18
ERBB2-205ENST00000578199 NFE2L2Q16236 605 aa22.41■■□□□ 1.18
ERBB2-205ENST00000578199 TMEM57Q8N5G2 664 aa22.41■■□□□ 1.18
ERBB2-205ENST00000578199 CDC42BPGQ6DT37 1551 aa22.4■■□□□ 1.18
ERBB2-205ENST00000578199 ELL2O00472 640 aaPredicted RBP22.4■■□□□ 1.18
ERBB2-205ENST00000578199 UBR1Q8IWV7 1749 aa22.39■■□□□ 1.18
ERBB2-205ENST00000578199 USP19O94966 1318 aa22.39■■□□□ 1.17
ERBB2-205ENST00000578199 DAXXQ9UER7 740 aaPredicted RBP22.38■■□□□ 1.17
ERBB2-205ENST00000578199 SIRT1Q96EB6 747 aa22.38■■□□□ 1.17
ERBB2-205ENST00000578199 TECPR2O15040 1411 aa22.38■■□□□ 1.17
ERBB2-205ENST00000578199 ADAMTS13Q76LX8 1427 aa22.38■■□□□ 1.17
ERBB2-205ENST00000578199 TSPYL6Q8N831 410 aa22.37■■□□□ 1.17
ERBB2-205ENST00000578199 FAM83GA6ND36 823 aa22.37■■□□□ 1.17
ERBB2-205ENST00000578199 DDX19BQ9UMR2 479 aa22.36■■□□□ 1.17
ERBB2-205ENST00000578199 KNDC1Q76NI1 1749 aa22.36■■□□□ 1.17
ERBB2-205ENST00000578199 DCTN1Q14203 1278 aa22.35■■□□□ 1.17
ERBB2-205ENST00000578199 SOX12O15370 315 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms