RNA–Protein interactions for RNA: ENST00000575639.1

TRAPPC1-207, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-207ENST00000575639 PLEKHG5O94827 1062 aa20.92■□□□□ 0.94
TRAPPC1-207ENST00000575639 C8orf37Q96NL8 207 aa20.92■□□□□ 0.94
TRAPPC1-207ENST00000575639 LRP6O75581 1613 aa20.92■□□□□ 0.94
TRAPPC1-207ENST00000575639 HDGFL2Q7Z4V5 671 aaPredicted RBP20.91■□□□□ 0.94
TRAPPC1-207ENST00000575639 NGLY1Q96IV0 654 aa20.91■□□□□ 0.94
TRAPPC1-207ENST00000575639 ITSN1Q15811 1721 aa20.9■□□□□ 0.94
TRAPPC1-207ENST00000575639 ZNF772Q68DY9 489 aaPredicted RBP20.9■□□□□ 0.94
TRAPPC1-207ENST00000575639 ABTB2Q8N961 1025 aa20.9■□□□□ 0.94
TRAPPC1-207ENST00000575639 TERF2IPQ9NYB0 399 aa20.9■□□□□ 0.94
TRAPPC1-207ENST00000575639 HSPA5P11021 654 aaKnown RBP20.89■□□□□ 0.93
TRAPPC1-207ENST00000575639 CABLES1Q8TDN4 633 aa20.89■□□□□ 0.93
TRAPPC1-207ENST00000575639 SLC12A5Q9H2X9 1139 aa20.89■□□□□ 0.93
TRAPPC1-207ENST00000575639 NINLQ9Y2I6 1382 aa20.88■□□□□ 0.93
TRAPPC1-207ENST00000575639 TOPAZ1Q8N9V7 1692 aa20.87■□□□□ 0.93
TRAPPC1-207ENST00000575639 USP6P35125 1406 aa20.87■□□□□ 0.93
TRAPPC1-207ENST00000575639 KTN1Q86UP2 1357 aaKnown RBP20.86■□□□□ 0.93
TRAPPC1-207ENST00000575639 AFF2P51816 1311 aa20.86■□□□□ 0.93
TRAPPC1-207ENST00000575639 NUTM2GQ5VZR2 741 aa20.86■□□□□ 0.93
TRAPPC1-207ENST00000575639 NLRP13Q86W25 1043 aa20.86■□□□□ 0.93
TRAPPC1-207ENST00000575639 COL22A1Q8NFW1 1626 aaPredicted RBP20.85■□□□□ 0.93
TRAPPC1-207ENST00000575639 CPSF1Q10570 1443 aaKnown RBP20.84■□□□□ 0.93
TRAPPC1-207ENST00000575639 TTC21BQ7Z4L5 1316 aa20.83■□□□□ 0.93
TRAPPC1-207ENST00000575639 TTC21AQ8NDW8 1320 aa20.83■□□□□ 0.93
TRAPPC1-207ENST00000575639 NLRP6P59044 892 aa20.83■□□□□ 0.93
TRAPPC1-207ENST00000575639 FNBP4Q8N3X1 1017 aaPredicted RBP20.82■□□□□ 0.92
TRAPPC1-207ENST00000575639 USP21Q9UK80 565 aa20.82■□□□□ 0.92
TRAPPC1-207ENST00000575639 SSH2Q76I76 1423 aa20.8■□□□□ 0.92
TRAPPC1-207ENST00000575639 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.8■□□□□ 0.92
TRAPPC1-207ENST00000575639 TRPM3Q9HCF6 1732 aaPredicted RBP20.8■□□□□ 0.92
TRAPPC1-207ENST00000575639 RXRBP28702 533 aa20.79■□□□□ 0.92
TRAPPC1-207ENST00000575639 POLR3GLQ9BT43 218 aa20.79■□□□□ 0.92
TRAPPC1-207ENST00000575639 QTRT2Q9H974 415 aaKnown RBP20.79■□□□□ 0.92
TRAPPC1-207ENST00000575639 CDK12Q9NYV4 1490 aaPredicted RBP20.77■□□□□ 0.92
TRAPPC1-207ENST00000575639 A0A1W2PP64 1363 aa20.77■□□□□ 0.92
TRAPPC1-207ENST00000575639 FAM83GA6ND36 823 aa20.77■□□□□ 0.92
TRAPPC1-207ENST00000575639 PRDM11Q9NQV5 511 aa20.77■□□□□ 0.92
TRAPPC1-207ENST00000575639 USP19O94966 1318 aa20.77■□□□□ 0.91
TRAPPC1-207ENST00000575639 ANKRD36BQ8N2N9 1353 aa20.76■□□□□ 0.91
TRAPPC1-207ENST00000575639 GCP02774 474 aa20.76■□□□□ 0.91
TRAPPC1-207ENST00000575639 TRPC5Q9UL62 973 aaPredicted RBP20.76■□□□□ 0.91
TRAPPC1-207ENST00000575639 EDC4Q6P2E9 1401 aaKnown RBP20.76■□□□□ 0.91
TRAPPC1-207ENST00000575639 CD163L1Q9NR16 1453 aa20.75■□□□□ 0.91
TRAPPC1-207ENST00000575639 ALS2Q96Q42 1657 aa20.75■□□□□ 0.91
TRAPPC1-207ENST00000575639 ZC3H6P61129 1189 aaKnown RBP20.75■□□□□ 0.91
TRAPPC1-207ENST00000575639 UNC5CLQ8IV45 518 aa20.75■□□□□ 0.91
TRAPPC1-207ENST00000575639 KCNH5Q8NCM2 988 aa20.74■□□□□ 0.91
TRAPPC1-207ENST00000575639 RBM6P78332 1123 aaKnown RBP20.72■□□□□ 0.91
TRAPPC1-207ENST00000575639 NME9Q86XW9 330 aa20.72■□□□□ 0.91
TRAPPC1-207ENST00000575639 KIAA0232Q92628 1395 aa20.72■□□□□ 0.91
TRAPPC1-207ENST00000575639 BTG4Q9NY30 223 aa20.71■□□□□ 0.91
TRAPPC1-207ENST00000575639 USP31Q70CQ4 1352 aa20.7■□□□□ 0.9
TRAPPC1-207ENST00000575639 BCL9LQ86UU0 1499 aa20.69■□□□□ 0.9
TRAPPC1-207ENST00000575639 SLIT2O94813 1529 aa20.69■□□□□ 0.9
TRAPPC1-207ENST00000575639 CHRNA2Q15822 529 aa20.69■□□□□ 0.9
TRAPPC1-207ENST00000575639 CPDO75976 1380 aa20.69■□□□□ 0.9
TRAPPC1-207ENST00000575639 COG3Q96JB2 828 aa20.68■□□□□ 0.9
TRAPPC1-207ENST00000575639 ZBTB7CA1YPR0 619 aa20.67■□□□□ 0.9
TRAPPC1-207ENST00000575639 C11orf95C9JLR9 678 aaPredicted RBP20.67■□□□□ 0.9
TRAPPC1-207ENST00000575639 SOX12O15370 315 aa20.67■□□□□ 0.9
TRAPPC1-207ENST00000575639 VPS72Q15906 364 aa20.67■□□□□ 0.9
TRAPPC1-207ENST00000575639 ZRANB1Q9UGI0 708 aa20.67■□□□□ 0.9
TRAPPC1-207ENST00000575639 CCDC9Q9Y3X0 531 aaKnown RBP20.67■□□□□ 0.9
TRAPPC1-207ENST00000575639 ZEB1P37275 1124 aaPredicted RBP20.66■□□□□ 0.9
TRAPPC1-207ENST00000575639 EVA1CP58658 441 aa20.66■□□□□ 0.9
TRAPPC1-207ENST00000575639 GJD4Q96KN9 370 aaPredicted RBP20.66■□□□□ 0.9
TRAPPC1-207ENST00000575639 ATRNO75882 1429 aa20.66■□□□□ 0.9
TRAPPC1-207ENST00000575639 CARD14Q9BXL6 1004 aa20.65■□□□□ 0.9
TRAPPC1-207ENST00000575639 AKAP12Q02952 1782 aa20.64■□□□□ 0.9
TRAPPC1-207ENST00000575639 ARHGEF25Q86VW2 580 aa20.64■□□□□ 0.89
TRAPPC1-207ENST00000575639 KIF7Q2M1P5 1343 aa20.63■□□□□ 0.89
TRAPPC1-207ENST00000575639 FYB1O15117 783 aa20.63■□□□□ 0.89
TRAPPC1-207ENST00000575639 PANK3Q9H999 370 aa20.63■□□□□ 0.89
TRAPPC1-207ENST00000575639 RGS12O14924 1447 aa20.62■□□□□ 0.89
TRAPPC1-207ENST00000575639 CGNL1Q0VF96 1302 aa20.62■□□□□ 0.89
TRAPPC1-207ENST00000575639 STRN4Q9NRL3 753 aa20.62■□□□□ 0.89
TRAPPC1-207ENST00000575639 SLIT3O75094 1523 aa20.62■□□□□ 0.89
TRAPPC1-207ENST00000575639 MON2Q7Z3U7 1717 aa20.61■□□□□ 0.89
TRAPPC1-207ENST00000575639 AATKQ6ZMQ8 1374 aa20.61■□□□□ 0.89
TRAPPC1-207ENST00000575639 PIK3C2AO00443 1686 aa20.61■□□□□ 0.89
TRAPPC1-207ENST00000575639 GGNBP2Q9H3C7 697 aa20.61■□□□□ 0.89
TRAPPC1-207ENST00000575639 ABCA3Q99758 1704 aa20.61■□□□□ 0.89
TRAPPC1-207ENST00000575639 NSD3Q9BZ95 1437 aa20.61■□□□□ 0.89
TRAPPC1-207ENST00000575639 NRKQ7Z2Y5 1582 aa20.6■□□□□ 0.89
TRAPPC1-207ENST00000575639 COL14A1Q05707 1796 aaKnown RBP20.59■□□□□ 0.89
TRAPPC1-207ENST00000575639 MARF1Q9Y4F3 1742 aaKnown RBP20.58■□□□□ 0.89
TRAPPC1-207ENST00000575639 PHRF1Q9P1Y6 1649 aaKnown RBP20.58■□□□□ 0.89
TRAPPC1-207ENST00000575639 OVOS2A0A0J9YW53 1432 aa20.58■□□□□ 0.88
TRAPPC1-207ENST00000575639 OVOS2Q6IE36 1432 aa20.58■□□□□ 0.88
TRAPPC1-207ENST00000575639 KNSTRNQ9Y448 316 aa20.57■□□□□ 0.88
TRAPPC1-207ENST00000575639 CRYBG1Q9Y4K1 1723 aa20.57■□□□□ 0.88
TRAPPC1-207ENST00000575639 SPATA31A5Q5VU36 1347 aa20.56■□□□□ 0.88
TRAPPC1-207ENST00000575639 SPATA31A7Q8IWB4 1347 aa20.56■□□□□ 0.88
TRAPPC1-207ENST00000575639 CCDC7Q96M83 1385 aa20.55■□□□□ 0.88
TRAPPC1-207ENST00000575639 LARP1Q6PKG0 1096 aaKnown RBP20.54■□□□□ 0.88
TRAPPC1-207ENST00000575639 AXIN2Q9Y2T1 843 aa20.54■□□□□ 0.88
TRAPPC1-207ENST00000575639 WASHC2AQ641Q2 1341 aa20.53■□□□□ 0.88
TRAPPC1-207ENST00000575639 NWD2Q9ULI1 1742 aa20.53■□□□□ 0.88
TRAPPC1-207ENST00000575639 A0A0G2JS52 829 aa20.53■□□□□ 0.88
TRAPPC1-207ENST00000575639 ONECUT3O60422 494 aaPredicted RBP20.53■□□□□ 0.88
TRAPPC1-207ENST00000575639 CSB-PGBD3P0DP91 1061 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms