RNA–Protein interactions for RNA: ENST00000572980.5

TVP23A-206, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-206ENST00000572980 ILDR1Q86SU0 546 aaPredicted RBP32.14■■■□□ 2.74
TVP23A-206ENST00000572980 TRPM3Q9HCF6 1732 aaPredicted RBP32.14■■■□□ 2.74
TVP23A-206ENST00000572980 TNS3Q68CZ2 1445 aa32.13■■■□□ 2.73
TVP23A-206ENST00000572980 ZNF316A6NFI3 1004 aaPredicted RBP32.13■■■□□ 2.73
TVP23A-206ENST00000572980 LMOD2Q6P5Q4 547 aa32.13■■■□□ 2.73
TVP23A-206ENST00000572980 EDC4Q6P2E9 1401 aaKnown RBP32.12■■■□□ 2.73
TVP23A-206ENST00000572980 SSH2Q76I76 1423 aa32.12■■■□□ 2.73
TVP23A-206ENST00000572980 PANK3Q9H999 370 aa32.12■■■□□ 2.73
TVP23A-206ENST00000572980 TTC21BQ7Z4L5 1316 aa32.11■■■□□ 2.73
TVP23A-206ENST00000572980 TTC21AQ8NDW8 1320 aa32.1■■■□□ 2.73
TVP23A-206ENST00000572980 ARHGEF10O15013 1369 aa32.1■■■□□ 2.73
TVP23A-206ENST00000572980 JCADQ9P266 1359 aa32.1■■■□□ 2.73
TVP23A-206ENST00000572980 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.08■■■□□ 2.73
TVP23A-206ENST00000572980 ABTB2Q8N961 1025 aa32.08■■■□□ 2.73
TVP23A-206ENST00000572980 CARD14Q9BXL6 1004 aa32.07■■■□□ 2.72
TVP23A-206ENST00000572980 NRKQ7Z2Y5 1582 aa32.07■■■□□ 2.72
TVP23A-206ENST00000572980 ALS2Q96Q42 1657 aa32.06■■■□□ 2.72
TVP23A-206ENST00000572980 PNPLA6Q8IY17 1366 aa32.05■■■□□ 2.72
TVP23A-206ENST00000572980 NSD3Q9BZ95 1437 aa32.03■■■□□ 2.72
TVP23A-206ENST00000572980 SHPRHQ149N8 1683 aa32.02■■■□□ 2.72
TVP23A-206ENST00000572980 NLRP13Q86W25 1043 aa32.01■■■□□ 2.71
TVP23A-206ENST00000572980 NLRP6P59044 892 aa32■■■□□ 2.71
TVP23A-206ENST00000572980 NUTM2GQ5VZR2 741 aa32■■■□□ 2.71
TVP23A-206ENST00000572980 KNSTRNQ9Y448 316 aa32■■■□□ 2.71
TVP23A-206ENST00000572980 CGNL1Q0VF96 1302 aa31.98■■■□□ 2.71
TVP23A-206ENST00000572980 NME9Q86XW9 330 aa31.98■■■□□ 2.71
TVP23A-206ENST00000572980 SPATA31A6Q5VVP1 1343 aa31.98■■■□□ 2.71
TVP23A-206ENST00000572980 COL22A1Q8NFW1 1626 aaPredicted RBP31.97■■■□□ 2.71
TVP23A-206ENST00000572980 PIK3C2AO00443 1686 aa31.97■■■□□ 2.71
TVP23A-206ENST00000572980 DDX10Q13206 875 aaKnown RBP31.95■■■□□ 2.71
TVP23A-206ENST00000572980 FYB1O15117 783 aa31.94■■■□□ 2.7
TVP23A-206ENST00000572980 PLEKHG5O94827 1062 aa31.94■■■□□ 2.7
TVP23A-206ENST00000572980 PER1O15534 1290 aaPredicted RBP31.94■■■□□ 2.7
TVP23A-206ENST00000572980 HAP1P54257 671 aaPredicted RBP31.94■■■□□ 2.7
TVP23A-206ENST00000572980 USP31Q70CQ4 1352 aa31.93■■■□□ 2.7
TVP23A-206ENST00000572980 CABLES1Q8TDN4 633 aa31.93■■■□□ 2.7
TVP23A-206ENST00000572980 MED1Q15648 1581 aaPredicted RBP31.91■■■□□ 2.7
TVP23A-206ENST00000572980 COG3Q96JB2 828 aa31.91■■■□□ 2.7
TVP23A-206ENST00000572980 NUTM2BA6NNL0 878 aaPredicted RBP31.9■■■□□ 2.7
TVP23A-206ENST00000572980 NUTM2EB1AL46 878 aaPredicted RBP31.9■■■□□ 2.7
TVP23A-206ENST00000572980 NUTM2AQ8IVF1 878 aaPredicted RBP31.9■■■□□ 2.7
TVP23A-206ENST00000572980 GGNBP2Q9H3C7 697 aa31.9■■■□□ 2.7
TVP23A-206ENST00000572980 ZRANB1Q9UGI0 708 aa31.9■■■□□ 2.7
TVP23A-206ENST00000572980 USP19O94966 1318 aa31.9■■■□□ 2.7
TVP23A-206ENST00000572980 KIF20BQ96Q89 1820 aa31.89■■■□□ 2.69
TVP23A-206ENST00000572980 KCNH5Q8NCM2 988 aa31.86■■■□□ 2.69
TVP23A-206ENST00000572980 OVOS2A0A0J9YW53 1432 aa31.86■■■□□ 2.69
TVP23A-206ENST00000572980 OVOS2Q6IE36 1432 aa31.86■■■□□ 2.69
TVP23A-206ENST00000572980 NSD2O96028 1365 aa31.86■■■□□ 2.69
TVP23A-206ENST00000572980 GCP02774 474 aa31.85■■■□□ 2.69
TVP23A-206ENST00000572980 USP54Q70EL1 1684 aa31.85■■■□□ 2.69
TVP23A-206ENST00000572980 AMER1Q5JTC6 1135 aaPredicted RBP31.85■■■□□ 2.69
TVP23A-206ENST00000572980 CRYBG1Q9Y4K1 1723 aa31.83■■■□□ 2.69
TVP23A-206ENST00000572980 ABCA3Q99758 1704 aa31.83■■■□□ 2.69
TVP23A-206ENST00000572980 PHRF1Q9P1Y6 1649 aaKnown RBP31.82■■■□□ 2.68
TVP23A-206ENST00000572980 MARF1Q9Y4F3 1742 aaKnown RBP31.82■■■□□ 2.68
TVP23A-206ENST00000572980 SLIT3O75094 1523 aa31.82■■■□□ 2.68
TVP23A-206ENST00000572980 ADAMTS2O95450 1211 aa31.81■■■□□ 2.68
TVP23A-206ENST00000572980 NPC1L1Q9UHC9 1359 aa31.8■■■□□ 2.68
TVP23A-206ENST00000572980 SOX12O15370 315 aa31.79■■■□□ 2.68
TVP23A-206ENST00000572980 MEX3CQ5U5Q3 659 aaKnown RBP31.78■■■□□ 2.68
TVP23A-206ENST00000572980 LRP6O75581 1613 aa31.78■■■□□ 2.68
TVP23A-206ENST00000572980 ZC3H6P61129 1189 aaKnown RBP31.77■■■□□ 2.68
TVP23A-206ENST00000572980 CC2D1BQ5T0F9 858 aaKnown RBP31.77■■■□□ 2.68
TVP23A-206ENST00000572980 MORC1Q86VD1 984 aa31.77■■■□□ 2.68
TVP23A-206ENST00000572980 ANKRD26Q9UPS8 1709 aa31.76■■■□□ 2.67
TVP23A-206ENST00000572980 CPDO75976 1380 aa31.73■■■□□ 2.67
TVP23A-206ENST00000572980 CNGB1Q14028 1251 aaPredicted RBP31.73■■■□□ 2.67
TVP23A-206ENST00000572980 PRDM11Q9NQV5 511 aa31.73■■■□□ 2.67
TVP23A-206ENST00000572980 KIAA0232Q92628 1395 aa31.72■■■□□ 2.67
TVP23A-206ENST00000572980 NFAT5O94916 1531 aa31.72■■■□□ 2.67
TVP23A-206ENST00000572980 C8orf37Q96NL8 207 aa31.7■■■□□ 2.67
TVP23A-206ENST00000572980 ARHGEF25Q86VW2 580 aa31.69■■■□□ 2.66
TVP23A-206ENST00000572980 FAM83GA6ND36 823 aa31.68■■■□□ 2.66
TVP23A-206ENST00000572980 TNNT2P45379 298 aaPredicted RBP31.68■■■□□ 2.66
TVP23A-206ENST00000572980 NGLY1Q96IV0 654 aa31.68■■■□□ 2.66
TVP23A-206ENST00000572980 ZBTB7CA1YPR0 619 aa31.68■■■□□ 2.66
TVP23A-206ENST00000572980 AATKQ6ZMQ8 1374 aa31.66■■■□□ 2.66
TVP23A-206ENST00000572980 FBLN1P23142 703 aa31.66■■■□□ 2.66
TVP23A-206ENST00000572980 CHRNA2Q15822 529 aa31.65■■■□□ 2.66
TVP23A-206ENST00000572980 RRS1Q15050 365 aaKnown RBP31.63■■■□□ 2.65
TVP23A-206ENST00000572980 COL14A1Q05707 1796 aaKnown RBP31.63■■■□□ 2.65
TVP23A-206ENST00000572980 MAP3K19Q56UN5 1328 aa31.63■■■□□ 2.65
TVP23A-206ENST00000572980 AMPHP49418 695 aa31.61■■■□□ 2.65
TVP23A-206ENST00000572980 LTN1O94822 1766 aa31.61■■■□□ 2.65
TVP23A-206ENST00000572980 FNBP4Q8N3X1 1017 aaPredicted RBP31.6■■■□□ 2.65
TVP23A-206ENST00000572980 BTG4Q9NY30 223 aa31.59■■■□□ 2.65
TVP23A-206ENST00000572980 POLKQ9UBT6 870 aa31.59■■■□□ 2.65
TVP23A-206ENST00000572980 MAP2P11137 1827 aaKnown RBP31.58■■■□□ 2.65
TVP23A-206ENST00000572980 KIF24Q5T7B8 1368 aa31.58■■■□□ 2.65
TVP23A-206ENST00000572980 SLIT2O94813 1529 aa31.57■■■□□ 2.64
TVP23A-206ENST00000572980 AFF2P51816 1311 aa31.57■■■□□ 2.64
TVP23A-206ENST00000572980 RALBP1Q15311 655 aa31.56■■■□□ 2.64
TVP23A-206ENST00000572980 IP6K1Q92551 441 aa31.56■■■□□ 2.64
TVP23A-206ENST00000572980 EMILIN1Q9Y6C2 1016 aa31.56■■■□□ 2.64
TVP23A-206ENST00000572980 ABCC6O95255 1503 aa31.56■■■□□ 2.64
TVP23A-206ENST00000572980 PPM1GO15355 546 aaPredicted RBP31.56■■■□□ 2.64
TVP23A-206ENST00000572980 PHF23Q9BUL5 403 aaPredicted RBP31.56■■■□□ 2.64
TVP23A-206ENST00000572980 RTL1A6NKG5 1358 aa31.55■■■□□ 2.64
TVP23A-206ENST00000572980 PARD3Q8TEW0 1356 aa31.55■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms