RNA–Protein interactions for RNA: ENST00000569506.1

NEIL1-223, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-223ENST00000569506 A0A1W2PP64 1363 aa22.24■■□□□ 1.15
NEIL1-223ENST00000569506 RGS12O14924 1447 aa22.23■■□□□ 1.15
NEIL1-223ENST00000569506 CPSF1Q10570 1443 aaKnown RBP22.23■■□□□ 1.15
NEIL1-223ENST00000569506 LRRC59Q96AG4 307 aaKnown RBP22.22■■□□□ 1.15
NEIL1-223ENST00000569506 NSD3Q9BZ95 1437 aa22.22■■□□□ 1.15
NEIL1-223ENST00000569506 RBM6P78332 1123 aaKnown RBP22.2■■□□□ 1.14
NEIL1-223ENST00000569506 NPC1L1Q9UHC9 1359 aa22.2■■□□□ 1.14
NEIL1-223ENST00000569506 C1orf167Q5SNV9 1468 aa22.2■■□□□ 1.14
NEIL1-223ENST00000569506 RGPD8O14715 1765 aaPredicted RBP22.2■■□□□ 1.14
NEIL1-223ENST00000569506 C8orf37Q96NL8 207 aa22.19■■□□□ 1.14
NEIL1-223ENST00000569506 PHF8Q9UPP1 1060 aa22.19■■□□□ 1.14
NEIL1-223ENST00000569506 ACEP12821 1306 aa22.19■■□□□ 1.14
NEIL1-223ENST00000569506 KTN1Q86UP2 1357 aaKnown RBP22.19■■□□□ 1.14
NEIL1-223ENST00000569506 PNPLA6Q8IY17 1366 aa22.19■■□□□ 1.14
NEIL1-223ENST00000569506 POLR3AO14802 1390 aaPredicted RBP22.18■■□□□ 1.14
NEIL1-223ENST00000569506 ESCO1Q5FWF5 840 aa22.18■■□□□ 1.14
NEIL1-223ENST00000569506 AMER1Q5JTC6 1135 aaPredicted RBP22.18■■□□□ 1.14
NEIL1-223ENST00000569506 NGDNQ8NEJ9 315 aaKnown RBP22.18■■□□□ 1.14
NEIL1-223ENST00000569506 PMFBP1Q8TBY8 1022 aa22.18■■□□□ 1.14
NEIL1-223ENST00000569506 QTRT2Q9H974 415 aaKnown RBP22.18■■□□□ 1.14
NEIL1-223ENST00000569506 MIER1Q8N108 512 aa22.17■■□□□ 1.14
NEIL1-223ENST00000569506 CGNL1Q0VF96 1302 aa22.16■■□□□ 1.14
NEIL1-223ENST00000569506 PRKRIP1Q9H875 184 aaPredicted RBP22.16■■□□□ 1.14
NEIL1-223ENST00000569506 AKAP12Q02952 1782 aa22.16■■□□□ 1.14
NEIL1-223ENST00000569506 EDC4Q6P2E9 1401 aaKnown RBP22.15■■□□□ 1.14
NEIL1-223ENST00000569506 RALBP1Q15311 655 aa22.15■■□□□ 1.14
NEIL1-223ENST00000569506 MON2Q7Z3U7 1717 aa22.14■■□□□ 1.13
NEIL1-223ENST00000569506 NSD2O96028 1365 aa22.13■■□□□ 1.13
NEIL1-223ENST00000569506 ORAI2Q96SN7 254 aa22.13■■□□□ 1.13
NEIL1-223ENST00000569506 USP6P35125 1406 aa22.13■■□□□ 1.13
NEIL1-223ENST00000569506 BRD4O60885 1362 aaPredicted RBP22.12■■□□□ 1.13
NEIL1-223ENST00000569506 KIF1AQ12756 1690 aa22.12■■□□□ 1.13
NEIL1-223ENST00000569506 CC2D1BQ5T0F9 858 aaKnown RBP22.12■■□□□ 1.13
NEIL1-223ENST00000569506 NGLY1Q96IV0 654 aa22.11■■□□□ 1.13
NEIL1-223ENST00000569506 PARD3Q8TEW0 1356 aa22.11■■□□□ 1.13
NEIL1-223ENST00000569506 CNGB1Q14028 1251 aaPredicted RBP22.1■■□□□ 1.13
NEIL1-223ENST00000569506 DDX17Q92841 729 aaKnown RBP22.1■■□□□ 1.13
NEIL1-223ENST00000569506 EP400Q96L91 3159 aa22.09■■□□□ 1.13
NEIL1-223ENST00000569506 TTC21BQ7Z4L5 1316 aa22.08■■□□□ 1.13
NEIL1-223ENST00000569506 TTC21AQ8NDW8 1320 aa22.08■■□□□ 1.13
NEIL1-223ENST00000569506 SSH2Q76I76 1423 aa22.08■■□□□ 1.13
NEIL1-223ENST00000569506 FYB1O15117 783 aa22.08■■□□□ 1.13
NEIL1-223ENST00000569506 PSME1Q06323 249 aa22.08■■□□□ 1.13
NEIL1-223ENST00000569506 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.08■■□□□ 1.13
NEIL1-223ENST00000569506 CCER2I3L3R5 266 aa22.06■■□□□ 1.12
NEIL1-223ENST00000569506 ADAMTS2O95450 1211 aa22.06■■□□□ 1.12
NEIL1-223ENST00000569506 NRKQ7Z2Y5 1582 aa22.06■■□□□ 1.12
NEIL1-223ENST00000569506 FOXO3O43524 673 aa22.05■■□□□ 1.12
NEIL1-223ENST00000569506 MORC1Q86VD1 984 aa22.05■■□□□ 1.12
NEIL1-223ENST00000569506 MYBBP1AQ9BQG0 1328 aaKnown RBP22.05■■□□□ 1.12
NEIL1-223ENST00000569506 KIF20BQ96Q89 1820 aa22.04■■□□□ 1.12
NEIL1-223ENST00000569506 GGNBP2Q9H3C7 697 aa22.03■■□□□ 1.12
NEIL1-223ENST00000569506 SOS2Q07890 1332 aaPredicted RBP22.03■■□□□ 1.12
NEIL1-223ENST00000569506 NPHP3Q7Z494 1330 aa22.03■■□□□ 1.12
NEIL1-223ENST00000569506 COL22A1Q8NFW1 1626 aaPredicted RBP22.02■■□□□ 1.12
NEIL1-223ENST00000569506 KRT28Q7Z3Y7 464 aa22.02■■□□□ 1.12
NEIL1-223ENST00000569506 NME9Q86XW9 330 aa22.02■■□□□ 1.12
NEIL1-223ENST00000569506 USP21Q9UK80 565 aa22.02■■□□□ 1.12
NEIL1-223ENST00000569506 TRPC5Q9UL62 973 aaPredicted RBP22.02■■□□□ 1.12
NEIL1-223ENST00000569506 ANKRD26Q9UPS8 1709 aa22■■□□□ 1.11
NEIL1-223ENST00000569506 ATRNO75882 1429 aa22■■□□□ 1.11
NEIL1-223ENST00000569506 FNBP4Q8N3X1 1017 aaPredicted RBP22■■□□□ 1.11
NEIL1-223ENST00000569506 COG3Q96JB2 828 aa22■■□□□ 1.11
NEIL1-223ENST00000569506 USP31Q70CQ4 1352 aa21.99■■□□□ 1.11
NEIL1-223ENST00000569506 PAK3O75914 559 aaPredicted RBP21.99■■□□□ 1.11
NEIL1-223ENST00000569506 ZRANB1Q9UGI0 708 aa21.99■■□□□ 1.11
NEIL1-223ENST00000569506 PPP2R1AP30153 589 aa21.98■■□□□ 1.11
NEIL1-223ENST00000569506 NLRP13Q86W25 1043 aa21.98■■□□□ 1.11
NEIL1-223ENST00000569506 SBNO1A3KN83 1393 aa21.97■■□□□ 1.11
NEIL1-223ENST00000569506 ABTB2Q8N961 1025 aa21.96■■□□□ 1.11
NEIL1-223ENST00000569506 MARF1Q9Y4F3 1742 aaKnown RBP21.95■■□□□ 1.1
NEIL1-223ENST00000569506 XPCQ01831 940 aaPredicted RBP21.95■■□□□ 1.1
NEIL1-223ENST00000569506 OVOS2A0A0J9YW53 1432 aa21.95■■□□□ 1.1
NEIL1-223ENST00000569506 OVOS2Q6IE36 1432 aa21.95■■□□□ 1.1
NEIL1-223ENST00000569506 NLRP6P59044 892 aa21.94■■□□□ 1.1
NEIL1-223ENST00000569506 CCDC125Q86Z20 511 aa21.94■■□□□ 1.1
NEIL1-223ENST00000569506 PXDNQ92626 1479 aa21.94■■□□□ 1.1
NEIL1-223ENST00000569506 TRPM3Q9HCF6 1732 aaPredicted RBP21.94■■□□□ 1.1
NEIL1-223ENST00000569506 PIK3C2AO00443 1686 aa21.93■■□□□ 1.1
NEIL1-223ENST00000569506 TNNT2P45379 298 aaPredicted RBP21.92■■□□□ 1.1
NEIL1-223ENST00000569506 AATKQ6ZMQ8 1374 aa21.91■■□□□ 1.1
NEIL1-223ENST00000569506 MRS2Q9HD23 443 aa21.91■■□□□ 1.1
NEIL1-223ENST00000569506 USP54Q70EL1 1684 aa21.91■■□□□ 1.1
NEIL1-223ENST00000569506 BCL9LQ86UU0 1499 aa21.9■■□□□ 1.1
NEIL1-223ENST00000569506 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.89■■□□□ 1.1
NEIL1-223ENST00000569506 SPATA31A3Q5VYP0 1347 aa21.89■■□□□ 1.1
NEIL1-223ENST00000569506 TNS3Q68CZ2 1445 aa21.89■■□□□ 1.09
NEIL1-223ENST00000569506 ARHGEF10O15013 1369 aa21.87■■□□□ 1.09
NEIL1-223ENST00000569506 CCDC184Q52MB2 194 aa21.87■■□□□ 1.09
NEIL1-223ENST00000569506 NUTM2GQ5VZR2 741 aa21.87■■□□□ 1.09
NEIL1-223ENST00000569506 LMOD2Q6P5Q4 547 aa21.87■■□□□ 1.09
NEIL1-223ENST00000569506 ALS2Q96Q42 1657 aa21.87■■□□□ 1.09
NEIL1-223ENST00000569506 MTHFSP49914 203 aa21.85■■□□□ 1.09
NEIL1-223ENST00000569506 KCNH5Q8NCM2 988 aa21.85■■□□□ 1.09
NEIL1-223ENST00000569506 GJD4Q96KN9 370 aaPredicted RBP21.84■■□□□ 1.09
NEIL1-223ENST00000569506 CFAP53Q96M91 514 aa21.84■■□□□ 1.09
NEIL1-223ENST00000569506 POLKQ9UBT6 870 aa21.84■■□□□ 1.09
NEIL1-223ENST00000569506 USP19O94966 1318 aa21.83■■□□□ 1.09
NEIL1-223ENST00000569506 BLMP54132 1417 aaPredicted RBP21.81■■□□□ 1.08
NEIL1-223ENST00000569506 SMG6Q86US8 1419 aaKnown RBP21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms