RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 TNS3Q68CZ2 1445 aa23.15■■□□□ 1.3
COMMD4-224ENST00000568877 SSH2Q76I76 1423 aa23.15■■□□□ 1.3
COMMD4-224ENST00000568877 TRPM3Q9HCF6 1732 aaPredicted RBP23.14■■□□□ 1.3
COMMD4-224ENST00000568877 JCADQ9P266 1359 aa23.13■■□□□ 1.29
COMMD4-224ENST00000568877 TTC21BQ7Z4L5 1316 aa23.12■■□□□ 1.29
COMMD4-224ENST00000568877 LMOD2Q6P5Q4 547 aa23.12■■□□□ 1.29
COMMD4-224ENST00000568877 MON2Q7Z3U7 1717 aa23.12■■□□□ 1.29
COMMD4-224ENST00000568877 EDC4Q6P2E9 1401 aaKnown RBP23.11■■□□□ 1.29
COMMD4-224ENST00000568877 PANK3Q9H999 370 aa23.11■■□□□ 1.29
COMMD4-224ENST00000568877 ARHGEF10O15013 1369 aa23.11■■□□□ 1.29
COMMD4-224ENST00000568877 CARD14Q9BXL6 1004 aa23.1■■□□□ 1.29
COMMD4-224ENST00000568877 PNPLA6Q8IY17 1366 aa23.1■■□□□ 1.29
COMMD4-224ENST00000568877 TTC21AQ8NDW8 1320 aa23.09■■□□□ 1.29
COMMD4-224ENST00000568877 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.09■■□□□ 1.29
COMMD4-224ENST00000568877 ABTB2Q8N961 1025 aa23.09■■□□□ 1.29
COMMD4-224ENST00000568877 NRKQ7Z2Y5 1582 aa23.09■■□□□ 1.29
COMMD4-224ENST00000568877 ZNF316A6NFI3 1004 aaPredicted RBP23.08■■□□□ 1.29
COMMD4-224ENST00000568877 ALS2Q96Q42 1657 aa23.07■■□□□ 1.28
COMMD4-224ENST00000568877 NSD3Q9BZ95 1437 aa23.06■■□□□ 1.28
COMMD4-224ENST00000568877 SHPRHQ149N8 1683 aa23.06■■□□□ 1.28
COMMD4-224ENST00000568877 NUTM2GQ5VZR2 741 aa23.05■■□□□ 1.28
COMMD4-224ENST00000568877 NME9Q86XW9 330 aa23.04■■□□□ 1.28
COMMD4-224ENST00000568877 SPATA31A6Q5VVP1 1343 aa23.04■■□□□ 1.28
COMMD4-224ENST00000568877 NLRP6P59044 892 aa23.03■■□□□ 1.28
COMMD4-224ENST00000568877 NLRP13Q86W25 1043 aa23.03■■□□□ 1.28
COMMD4-224ENST00000568877 COL22A1Q8NFW1 1626 aaPredicted RBP23.03■■□□□ 1.28
COMMD4-224ENST00000568877 PLEKHG5O94827 1062 aa23.02■■□□□ 1.28
COMMD4-224ENST00000568877 PIK3C2AO00443 1686 aa23.01■■□□□ 1.27
COMMD4-224ENST00000568877 CABLES1Q8TDN4 633 aa23.01■■□□□ 1.27
COMMD4-224ENST00000568877 USP31Q70CQ4 1352 aa23.01■■□□□ 1.27
COMMD4-224ENST00000568877 FYB1O15117 783 aa23■■□□□ 1.27
COMMD4-224ENST00000568877 ZRANB1Q9UGI0 708 aa23■■□□□ 1.27
COMMD4-224ENST00000568877 KNSTRNQ9Y448 316 aa23■■□□□ 1.27
COMMD4-224ENST00000568877 NUTM2BA6NNL0 878 aaPredicted RBP22.99■■□□□ 1.27
COMMD4-224ENST00000568877 NUTM2EB1AL46 878 aaPredicted RBP22.99■■□□□ 1.27
COMMD4-224ENST00000568877 PER1O15534 1290 aaPredicted RBP22.99■■□□□ 1.27
COMMD4-224ENST00000568877 NUTM2AQ8IVF1 878 aaPredicted RBP22.99■■□□□ 1.27
COMMD4-224ENST00000568877 CGNL1Q0VF96 1302 aa22.99■■□□□ 1.27
COMMD4-224ENST00000568877 MED1Q15648 1581 aaPredicted RBP22.98■■□□□ 1.27
COMMD4-224ENST00000568877 USP19O94966 1318 aa22.98■■□□□ 1.27
COMMD4-224ENST00000568877 HAP1P54257 671 aaPredicted RBP22.97■■□□□ 1.27
COMMD4-224ENST00000568877 DDX10Q13206 875 aaKnown RBP22.97■■□□□ 1.27
COMMD4-224ENST00000568877 GGNBP2Q9H3C7 697 aa22.97■■□□□ 1.27
COMMD4-224ENST00000568877 COG3Q96JB2 828 aa22.95■■□□□ 1.26
COMMD4-224ENST00000568877 OVOS2A0A0J9YW53 1432 aa22.94■■□□□ 1.26
COMMD4-224ENST00000568877 OVOS2Q6IE36 1432 aa22.94■■□□□ 1.26
COMMD4-224ENST00000568877 GCP02774 474 aa22.94■■□□□ 1.26
COMMD4-224ENST00000568877 AMER1Q5JTC6 1135 aaPredicted RBP22.93■■□□□ 1.26
COMMD4-224ENST00000568877 LRP6O75581 1613 aa22.93■■□□□ 1.26
COMMD4-224ENST00000568877 CRYBG1Q9Y4K1 1723 aa22.92■■□□□ 1.26
COMMD4-224ENST00000568877 ADAMTS2O95450 1211 aa22.92■■□□□ 1.26
COMMD4-224ENST00000568877 KCNH5Q8NCM2 988 aa22.92■■□□□ 1.26
COMMD4-224ENST00000568877 USP54Q70EL1 1684 aa22.92■■□□□ 1.26
COMMD4-224ENST00000568877 SLIT3O75094 1523 aa22.92■■□□□ 1.26
COMMD4-224ENST00000568877 KIF20BQ96Q89 1820 aa22.91■■□□□ 1.26
COMMD4-224ENST00000568877 ABCA3Q99758 1704 aa22.91■■□□□ 1.26
COMMD4-224ENST00000568877 MARF1Q9Y4F3 1742 aaKnown RBP22.91■■□□□ 1.26
COMMD4-224ENST00000568877 NSD2O96028 1365 aa22.9■■□□□ 1.26
COMMD4-224ENST00000568877 PHRF1Q9P1Y6 1649 aaKnown RBP22.9■■□□□ 1.26
COMMD4-224ENST00000568877 SOX12O15370 315 aa22.89■■□□□ 1.25
COMMD4-224ENST00000568877 MEX3CQ5U5Q3 659 aaKnown RBP22.89■■□□□ 1.25
COMMD4-224ENST00000568877 ZC3H6P61129 1189 aaKnown RBP22.88■■□□□ 1.25
COMMD4-224ENST00000568877 NPC1L1Q9UHC9 1359 aa22.87■■□□□ 1.25
COMMD4-224ENST00000568877 CC2D1BQ5T0F9 858 aaKnown RBP22.85■■□□□ 1.25
COMMD4-224ENST00000568877 NFAT5O94916 1531 aa22.85■■□□□ 1.25
COMMD4-224ENST00000568877 CPDO75976 1380 aa22.85■■□□□ 1.25
COMMD4-224ENST00000568877 KIAA0232Q92628 1395 aa22.85■■□□□ 1.25
COMMD4-224ENST00000568877 MORC1Q86VD1 984 aa22.84■■□□□ 1.25
COMMD4-224ENST00000568877 C8orf37Q96NL8 207 aa22.84■■□□□ 1.25
COMMD4-224ENST00000568877 PRDM11Q9NQV5 511 aa22.84■■□□□ 1.25
COMMD4-224ENST00000568877 FAM83GA6ND36 823 aa22.83■■□□□ 1.25
COMMD4-224ENST00000568877 ARHGEF25Q86VW2 580 aa22.83■■□□□ 1.25
COMMD4-224ENST00000568877 FBLN1P23142 703 aa22.82■■□□□ 1.24
COMMD4-224ENST00000568877 CNGB1Q14028 1251 aaPredicted RBP22.82■■□□□ 1.24
COMMD4-224ENST00000568877 NGLY1Q96IV0 654 aa22.82■■□□□ 1.24
COMMD4-224ENST00000568877 ANKRD26Q9UPS8 1709 aa22.82■■□□□ 1.24
COMMD4-224ENST00000568877 CHRNA2Q15822 529 aa22.81■■□□□ 1.24
COMMD4-224ENST00000568877 ZBTB7CA1YPR0 619 aa22.8■■□□□ 1.24
COMMD4-224ENST00000568877 TNNT2P45379 298 aaPredicted RBP22.8■■□□□ 1.24
COMMD4-224ENST00000568877 AATKQ6ZMQ8 1374 aa22.78■■□□□ 1.24
COMMD4-224ENST00000568877 FNBP4Q8N3X1 1017 aaPredicted RBP22.78■■□□□ 1.24
COMMD4-224ENST00000568877 MAP3K19Q56UN5 1328 aa22.78■■□□□ 1.24
COMMD4-224ENST00000568877 RRS1Q15050 365 aaKnown RBP22.77■■□□□ 1.24
COMMD4-224ENST00000568877 COL14A1Q05707 1796 aaKnown RBP22.76■■□□□ 1.23
COMMD4-224ENST00000568877 AFF2P51816 1311 aa22.76■■□□□ 1.23
COMMD4-224ENST00000568877 BTG4Q9NY30 223 aa22.75■■□□□ 1.23
COMMD4-224ENST00000568877 SLIT2O94813 1529 aa22.75■■□□□ 1.23
COMMD4-224ENST00000568877 AMPHP49418 695 aa22.74■■□□□ 1.23
COMMD4-224ENST00000568877 POLKQ9UBT6 870 aa22.74■■□□□ 1.23
COMMD4-224ENST00000568877 IP6K1Q92551 441 aa22.73■■□□□ 1.23
COMMD4-224ENST00000568877 PHF23Q9BUL5 403 aaPredicted RBP22.73■■□□□ 1.23
COMMD4-224ENST00000568877 USP21Q9UK80 565 aa22.73■■□□□ 1.23
COMMD4-224ENST00000568877 AXIN2Q9Y2T1 843 aa22.73■■□□□ 1.23
COMMD4-224ENST00000568877 EMILIN1Q9Y6C2 1016 aa22.72■■□□□ 1.23
COMMD4-224ENST00000568877 BCL9LQ86UU0 1499 aa22.72■■□□□ 1.23
COMMD4-224ENST00000568877 LMO7Q8WWI1 1683 aa22.71■■□□□ 1.23
COMMD4-224ENST00000568877 CAMTA1Q9Y6Y1 1673 aa22.71■■□□□ 1.23
COMMD4-224ENST00000568877 LTN1O94822 1766 aa22.71■■□□□ 1.23
COMMD4-224ENST00000568877 HOXC9P31274 260 aa22.71■■□□□ 1.23
COMMD4-224ENST00000568877 UNC5CLQ8IV45 518 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms