RNA–Protein interactions for RNA: ENST00000568814.1

HERPUD1-216, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 509 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-216ENST00000568814 PXDNQ92626 1479 aa14.05□□□□□ -0.16
HERPUD1-216ENST00000568814 KRT28Q7Z3Y7 464 aa14.03□□□□□ -0.16
HERPUD1-216ENST00000568814 SOS2Q07890 1332 aaPredicted RBP14.03□□□□□ -0.16
HERPUD1-216ENST00000568814 TTC21AQ8NDW8 1320 aa14.03□□□□□ -0.16
HERPUD1-216ENST00000568814 SBNO1A3KN83 1393 aa14.03□□□□□ -0.16
HERPUD1-216ENST00000568814 SSH2Q76I76 1423 aa14.03□□□□□ -0.16
HERPUD1-216ENST00000568814 NSD3Q9BZ95 1437 aa14.03□□□□□ -0.16
HERPUD1-216ENST00000568814 TRPM3Q9HCF6 1732 aaPredicted RBP14.02□□□□□ -0.16
HERPUD1-216ENST00000568814 DDX10Q13206 875 aaKnown RBP14.02□□□□□ -0.17
HERPUD1-216ENST00000568814 KNSTRNQ9Y448 316 aa14.02□□□□□ -0.17
HERPUD1-216ENST00000568814 PHLPP1O60346 1717 aa14.01□□□□□ -0.17
HERPUD1-216ENST00000568814 TNS3Q68CZ2 1445 aa14.01□□□□□ -0.17
HERPUD1-216ENST00000568814 CGNL1Q0VF96 1302 aa14.01□□□□□ -0.17
HERPUD1-216ENST00000568814 NSD2O96028 1365 aa14□□□□□ -0.17
HERPUD1-216ENST00000568814 TTC21BQ7Z4L5 1316 aa14□□□□□ -0.17
HERPUD1-216ENST00000568814 CARD14Q9BXL6 1004 aa14□□□□□ -0.17
HERPUD1-216ENST00000568814 ARHGEF10O15013 1369 aa13.99□□□□□ -0.17
HERPUD1-216ENST00000568814 XPCQ01831 940 aaPredicted RBP13.99□□□□□ -0.17
HERPUD1-216ENST00000568814 DDX17Q92841 729 aaKnown RBP13.99□□□□□ -0.17
HERPUD1-216ENST00000568814 COL16A1Q07092 1604 aaPredicted RBP13.99□□□□□ -0.17
HERPUD1-216ENST00000568814 KIF20BQ96Q89 1820 aa13.99□□□□□ -0.17
HERPUD1-216ENST00000568814 NPC1L1Q9UHC9 1359 aa13.98□□□□□ -0.17
HERPUD1-216ENST00000568814 ALS2Q96Q42 1657 aa13.98□□□□□ -0.17
HERPUD1-216ENST00000568814 SPATA31A3Q5VYP0 1347 aa13.98□□□□□ -0.17
HERPUD1-216ENST00000568814 PER1O15534 1290 aaPredicted RBP13.98□□□□□ -0.17
HERPUD1-216ENST00000568814 PAK3O75914 559 aaPredicted RBP13.98□□□□□ -0.17
HERPUD1-216ENST00000568814 LRRC59Q96AG4 307 aaKnown RBP13.98□□□□□ -0.17
HERPUD1-216ENST00000568814 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.97□□□□□ -0.17
HERPUD1-216ENST00000568814 PIK3C2AO00443 1686 aa13.97□□□□□ -0.17
HERPUD1-216ENST00000568814 USP54Q70EL1 1684 aa13.97□□□□□ -0.17
HERPUD1-216ENST00000568814 ABTB2Q8N961 1025 aa13.96□□□□□ -0.17
HERPUD1-216ENST00000568814 USP31Q70CQ4 1352 aa13.96□□□□□ -0.18
HERPUD1-216ENST00000568814 ANKRD26Q9UPS8 1709 aa13.95□□□□□ -0.18
HERPUD1-216ENST00000568814 AMER1Q5JTC6 1135 aaPredicted RBP13.95□□□□□ -0.18
HERPUD1-216ENST00000568814 OVOS2A0A0J9YW53 1432 aa13.94□□□□□ -0.18
HERPUD1-216ENST00000568814 FYB1O15117 783 aa13.94□□□□□ -0.18
HERPUD1-216ENST00000568814 OVOS2Q6IE36 1432 aa13.94□□□□□ -0.18
HERPUD1-216ENST00000568814 LMOD2Q6P5Q4 547 aa13.94□□□□□ -0.18
HERPUD1-216ENST00000568814 NLRP13Q86W25 1043 aa13.94□□□□□ -0.18
HERPUD1-216ENST00000568814 NME9Q86XW9 330 aa13.94□□□□□ -0.18
HERPUD1-216ENST00000568814 COG3Q96JB2 828 aa13.94□□□□□ -0.18
HERPUD1-216ENST00000568814 COL22A1Q8NFW1 1626 aaPredicted RBP13.93□□□□□ -0.18
HERPUD1-216ENST00000568814 NLRP6P59044 892 aa13.93□□□□□ -0.18
HERPUD1-216ENST00000568814 SHPRHQ149N8 1683 aa13.93□□□□□ -0.18
HERPUD1-216ENST00000568814 JCADQ9P266 1359 aa13.93□□□□□ -0.18
HERPUD1-216ENST00000568814 USP19O94966 1318 aa13.92□□□□□ -0.18
HERPUD1-216ENST00000568814 PNPLA6Q8IY17 1366 aa13.92□□□□□ -0.18
HERPUD1-216ENST00000568814 GGNBP2Q9H3C7 697 aa13.91□□□□□ -0.18
HERPUD1-216ENST00000568814 SLIT3O75094 1523 aa13.9□□□□□ -0.18
HERPUD1-216ENST00000568814 MARF1Q9Y4F3 1742 aaKnown RBP13.9□□□□□ -0.18
HERPUD1-216ENST00000568814 MORC1Q86VD1 984 aa13.9□□□□□ -0.18
HERPUD1-216ENST00000568814 CRYBG1Q9Y4K1 1723 aa13.9□□□□□ -0.18
HERPUD1-216ENST00000568814 CC2D1BQ5T0F9 858 aaKnown RBP13.89□□□□□ -0.19
HERPUD1-216ENST00000568814 NUTM2GQ5VZR2 741 aa13.89□□□□□ -0.19
HERPUD1-216ENST00000568814 KCNH5Q8NCM2 988 aa13.89□□□□□ -0.19
HERPUD1-216ENST00000568814 ABCA3Q99758 1704 aa13.89□□□□□ -0.19
HERPUD1-216ENST00000568814 PHRF1Q9P1Y6 1649 aaKnown RBP13.89□□□□□ -0.19
HERPUD1-216ENST00000568814 RALBP1Q15311 655 aa13.88□□□□□ -0.19
HERPUD1-216ENST00000568814 UPF1Q92900 1129 aaKnown RBP eCLIP13.88□□□□□ -0.19
HERPUD1-216ENST00000568814 ZRANB1Q9UGI0 708 aa13.88□□□□□ -0.19
HERPUD1-216ENST00000568814 SPATA31A6Q5VVP1 1343 aa13.88□□□□□ -0.19
HERPUD1-216ENST00000568814 AATKQ6ZMQ8 1374 aa13.87□□□□□ -0.19
HERPUD1-216ENST00000568814 PARD3Q8TEW0 1356 aa13.87□□□□□ -0.19
HERPUD1-216ENST00000568814 HAP1P54257 671 aaPredicted RBP13.87□□□□□ -0.19
HERPUD1-216ENST00000568814 NFAT5O94916 1531 aa13.86□□□□□ -0.19
HERPUD1-216ENST00000568814 ANP32CO43423 234 aa13.86□□□□□ -0.19
HERPUD1-216ENST00000568814 GCP02774 474 aa13.86□□□□□ -0.19
HERPUD1-216ENST00000568814 DIEXFQ68CQ4 756 aaKnown RBP13.86□□□□□ -0.19
HERPUD1-216ENST00000568814 PRKRIP1Q9H875 184 aaPredicted RBP13.84□□□□□ -0.19
HERPUD1-216ENST00000568814 ABCC6O95255 1503 aa13.84□□□□□ -0.19
HERPUD1-216ENST00000568814 CPDO75976 1380 aa13.83□□□□□ -0.19
HERPUD1-216ENST00000568814 KIF24Q5T7B8 1368 aa13.83□□□□□ -0.19
HERPUD1-216ENST00000568814 CNGB1Q14028 1251 aaPredicted RBP13.83□□□□□ -0.2
HERPUD1-216ENST00000568814 CABLES1Q8TDN4 633 aa13.83□□□□□ -0.2
HERPUD1-216ENST00000568814 RTL1A6NKG5 1358 aa13.83□□□□□ -0.2
HERPUD1-216ENST00000568814 SMG6Q86US8 1419 aaKnown RBP13.82□□□□□ -0.2
HERPUD1-216ENST00000568814 MYBBP1AQ9BQG0 1328 aaKnown RBP13.82□□□□□ -0.2
HERPUD1-216ENST00000568814 SOX12O15370 315 aa13.81□□□□□ -0.2
HERPUD1-216ENST00000568814 PLEKHG5O94827 1062 aa13.81□□□□□ -0.2
HERPUD1-216ENST00000568814 TNNT2P45379 298 aaPredicted RBP13.81□□□□□ -0.2
HERPUD1-216ENST00000568814 LTN1O94822 1766 aa13.81□□□□□ -0.2
HERPUD1-216ENST00000568814 ARHGEF25Q86VW2 580 aa13.8□□□□□ -0.2
HERPUD1-216ENST00000568814 PRDM11Q9NQV5 511 aa13.8□□□□□ -0.2
HERPUD1-216ENST00000568814 MAP2P11137 1827 aaKnown RBP13.8□□□□□ -0.2
HERPUD1-216ENST00000568814 KIAA0232Q92628 1395 aa13.8□□□□□ -0.2
HERPUD1-216ENST00000568814 CDK12Q9NYV4 1490 aaPredicted RBP13.8□□□□□ -0.2
HERPUD1-216ENST00000568814 COL14A1Q05707 1796 aaKnown RBP13.79□□□□□ -0.2
HERPUD1-216ENST00000568814 NUTM2BA6NNL0 878 aaPredicted RBP13.79□□□□□ -0.2
HERPUD1-216ENST00000568814 NUTM2EB1AL46 878 aaPredicted RBP13.79□□□□□ -0.2
HERPUD1-216ENST00000568814 PPP2R1AP30153 589 aa13.79□□□□□ -0.2
HERPUD1-216ENST00000568814 ZC3H6P61129 1189 aaKnown RBP13.79□□□□□ -0.2
HERPUD1-216ENST00000568814 NUTM2AQ8IVF1 878 aaPredicted RBP13.79□□□□□ -0.2
HERPUD1-216ENST00000568814 MAP3K19Q56UN5 1328 aa13.79□□□□□ -0.2
HERPUD1-216ENST00000568814 FLT4P35916 1363 aa13.79□□□□□ -0.2
HERPUD1-216ENST00000568814 AMPHP49418 695 aa13.78□□□□□ -0.2
HERPUD1-216ENST00000568814 RRS1Q15050 365 aaKnown RBP13.78□□□□□ -0.2
HERPUD1-216ENST00000568814 POLKQ9UBT6 870 aa13.78□□□□□ -0.2
HERPUD1-216ENST00000568814 BLMP54132 1417 aaPredicted RBP13.78□□□□□ -0.2
HERPUD1-216ENST00000568814 LRP6O75581 1613 aa13.78□□□□□ -0.2
HERPUD1-216ENST00000568814 CFAP53Q96M91 514 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms