RNA–Protein interactions for RNA: ENST00000568515.1

DENND4A-208, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 2,655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-208ENST00000568515 GGT6Q6P531 493 aa27.17■■□□□ 1.94
DENND4A-208ENST00000568515 HSCBQ8IWL3 235 aa27.17■■□□□ 1.94
DENND4A-208ENST00000568515 IL16Q14005 1332 aa27.17■■□□□ 1.94
DENND4A-208ENST00000568515 ARHGEF28Q8N1W1 1705 aaKnown RBP27.16■■□□□ 1.94
DENND4A-208ENST00000568515 TMEM57Q8N5G2 664 aa27.16■■□□□ 1.94
DENND4A-208ENST00000568515 ZBTB40Q9NUA8 1239 aa27.15■■□□□ 1.94
DENND4A-208ENST00000568515 ABCC11Q96J66 1382 aa27.14■■□□□ 1.94
DENND4A-208ENST00000568515 NUTM2DQ5VT03 806 aaPredicted RBP27.13■■□□□ 1.93
DENND4A-208ENST00000568515 ZNF692Q9BU19 519 aaPredicted RBP27.13■■□□□ 1.93
DENND4A-208ENST00000568515 VGFO15240 615 aaPredicted RBP27.13■■□□□ 1.93
DENND4A-208ENST00000568515 COL3A1P02461 1466 aaPredicted RBP27.12■■□□□ 1.93
DENND4A-208ENST00000568515 GGNBP2Q9H3C7 697 aa27.12■■□□□ 1.93
DENND4A-208ENST00000568515 A0A1W2PP64 1363 aa27.12■■□□□ 1.93
DENND4A-208ENST00000568515 IPO8O15397 1037 aaKnown RBP27.11■■□□□ 1.93
DENND4A-208ENST00000568515 ASXL2Q76L83 1435 aa27.11■■□□□ 1.93
DENND4A-208ENST00000568515 RBM25P49756 843 aaKnown RBP27.11■■□□□ 1.93
DENND4A-208ENST00000568515 PANK2Q9BZ23 570 aa27.11■■□□□ 1.93
DENND4A-208ENST00000568515 KIF16BQ96L93 1317 aa27.1■■□□□ 1.93
DENND4A-208ENST00000568515 RIPK4P57078 832 aa27.1■■□□□ 1.93
DENND4A-208ENST00000568515 NUCB1Q02818 461 aa27.1■■□□□ 1.93
DENND4A-208ENST00000568515 SAFB2Q14151 953 aaKnown RBP eCLIP27.1■■□□□ 1.93
DENND4A-208ENST00000568515 DDX11L8A8MPP1 907 aa27.09■■□□□ 1.93
DENND4A-208ENST00000568515 NCOA3Q9Y6Q9 1424 aa27.08■■□□□ 1.93
DENND4A-208ENST00000568515 FRMPD1Q5SYB0 1578 aa27.08■■□□□ 1.93
DENND4A-208ENST00000568515 DDIT3P35638 169 aa27.08■■□□□ 1.93
DENND4A-208ENST00000568515 SNX21Q969T3 373 aa27.08■■□□□ 1.93
DENND4A-208ENST00000568515 HECW2Q9P2P5 1572 aa27.07■■□□□ 1.92
DENND4A-208ENST00000568515 MRE11P49959 708 aa27.06■■□□□ 1.92
DENND4A-208ENST00000568515 SRPK2P78362 688 aaKnown RBP27.06■■□□□ 1.92
DENND4A-208ENST00000568515 LNPKQ9C0E8 428 aa27.06■■□□□ 1.92
DENND4A-208ENST00000568515 ABCC3O15438 1527 aa27.06■■□□□ 1.92
DENND4A-208ENST00000568515 CAMSAP1Q5T5Y3 1602 aa27.06■■□□□ 1.92
DENND4A-208ENST00000568515 NEXMIFQ5QGS0 1516 aa27.05■■□□□ 1.92
DENND4A-208ENST00000568515 ALDH1L2Q3SY69 923 aa27.05■■□□□ 1.92
DENND4A-208ENST00000568515 FYB1O15117 783 aa27.04■■□□□ 1.92
DENND4A-208ENST00000568515 CHD1LQ86WJ1 897 aa27.04■■□□□ 1.92
DENND4A-208ENST00000568515 PNNQ9H307 717 aaKnown RBP27.03■■□□□ 1.92
DENND4A-208ENST00000568515 UBE2Q2Q8WVN8 375 aa27.03■■□□□ 1.92
DENND4A-208ENST00000568515 MLH3Q9UHC1 1453 aa27.02■■□□□ 1.92
DENND4A-208ENST00000568515 DIAPH1O60610 1272 aaKnown RBP27.02■■□□□ 1.92
DENND4A-208ENST00000568515 TERF2IPQ9NYB0 399 aa27.01■■□□□ 1.91
DENND4A-208ENST00000568515 STK26Q9P289 416 aa27.01■■□□□ 1.91
DENND4A-208ENST00000568515 PIK3C2BO00750 1634 aa27.01■■□□□ 1.91
DENND4A-208ENST00000568515 POGZQ7Z3K3 1410 aa27.01■■□□□ 1.91
DENND4A-208ENST00000568515 SIGLEC1Q9BZZ2 1709 aa27■■□□□ 1.91
DENND4A-208ENST00000568515 MED14O60244 1454 aa27■■□□□ 1.91
DENND4A-208ENST00000568515 BMP2KLQ5H9B9 411 aa27■■□□□ 1.91
DENND4A-208ENST00000568515 CLCN1P35523 988 aa26.99■■□□□ 1.91
DENND4A-208ENST00000568515 GRPEL1Q9HAV7 217 aa26.99■■□□□ 1.91
DENND4A-208ENST00000568515 ISY1Q9ULR0 285 aaKnown RBP26.99■■□□□ 1.91
DENND4A-208ENST00000568515 CIZ1Q9ULV3 898 aaPredicted RBP26.99■■□□□ 1.91
DENND4A-208ENST00000568515 ANKRD26Q9UPS8 1709 aa26.99■■□□□ 1.91
DENND4A-208ENST00000568515 ATAD2Q6PL18 1390 aa26.98■■□□□ 1.91
DENND4A-208ENST00000568515 TNPO1Q92973 898 aaKnown RBP26.98■■□□□ 1.91
DENND4A-208ENST00000568515 PNPLA6Q8IY17 1366 aa26.97■■□□□ 1.91
DENND4A-208ENST00000568515 HSP90AB1P08238 724 aaKnown RBP26.97■■□□□ 1.91
DENND4A-208ENST00000568515 BRPF1P55201 1214 aaPredicted RBP26.96■■□□□ 1.91
DENND4A-208ENST00000568515 ZNF428Q96B54 188 aa26.95■■□□□ 1.91
DENND4A-208ENST00000568515 CD163L1Q9NR16 1453 aa26.95■■□□□ 1.9
DENND4A-208ENST00000568515 FCHSD2O94868 740 aa26.95■■□□□ 1.9
DENND4A-208ENST00000568515 ANKRD45Q5TZF3 282 aa26.94■■□□□ 1.9
DENND4A-208ENST00000568515 KIF2CQ99661 725 aa26.94■■□□□ 1.9
DENND4A-208ENST00000568515 ZBTB7BO15156 539 aaPredicted RBP26.94■■□□□ 1.9
DENND4A-208ENST00000568515 GCC1Q96CN9 775 aa26.94■■□□□ 1.9
DENND4A-208ENST00000568515 GBP4Q96PP9 640 aa26.94■■□□□ 1.9
DENND4A-208ENST00000568515 MINK1Q8N4C8 1332 aaPredicted RBP26.94■■□□□ 1.9
DENND4A-208ENST00000568515 CFAP74Q9C0B2 1584 aa26.94■■□□□ 1.9
DENND4A-208ENST00000568515 RAB3GAP1Q15042 981 aa26.93■■□□□ 1.9
DENND4A-208ENST00000568515 ZFYVE9O95405 1425 aa26.93■■□□□ 1.9
DENND4A-208ENST00000568515 IDI1Q13907 227 aa26.93■■□□□ 1.9
DENND4A-208ENST00000568515 PPIP5K1Q6PFW1 1433 aa26.92■■□□□ 1.9
DENND4A-208ENST00000568515 CHMP4BQ9H444 224 aaKnown RBP26.92■■□□□ 1.9
DENND4A-208ENST00000568515 SENP3Q9H4L4 574 aaPredicted RBP26.91■■□□□ 1.9
DENND4A-208ENST00000568515 PTPRMP28827 1452 aa26.91■■□□□ 1.9
DENND4A-208ENST00000568515 HDGFL2Q7Z4V5 671 aaPredicted RBP26.9■■□□□ 1.9
DENND4A-208ENST00000568515 PRAM1Q96QH2 718 aa26.9■■□□□ 1.9
DENND4A-208ENST00000568515 PRKAR2BP31323 418 aa26.89■■□□□ 1.9
DENND4A-208ENST00000568515 SKOR2Q2VWA4 1001 aaPredicted RBP26.89■■□□□ 1.89
DENND4A-208ENST00000568515 ARHGAP45Q92619 1136 aa26.89■■□□□ 1.89
DENND4A-208ENST00000568515 LRRC7Q96NW7 1537 aa26.88■■□□□ 1.89
DENND4A-208ENST00000568515 MRPL50Q8N5N7 158 aaKnown RBP26.88■■□□□ 1.89
DENND4A-208ENST00000568515 VAMP4O75379 141 aa26.88■■□□□ 1.89
DENND4A-208ENST00000568515 TBC1D9Q6ZT07 1266 aa26.88■■□□□ 1.89
DENND4A-208ENST00000568515 NAP1L5Q96NT1 182 aaPredicted RBP26.88■■□□□ 1.89
DENND4A-208ENST00000568515 CD2BP2O95400 341 aaKnown RBP26.87■■□□□ 1.89
DENND4A-208ENST00000568515 C1orf115Q9H7X2 142 aa26.87■■□□□ 1.89
DENND4A-208ENST00000568515 CDC42BPGQ6DT37 1551 aa26.87■■□□□ 1.89
DENND4A-208ENST00000568515 HSP90AA1P07900 732 aaKnown RBP26.87■■□□□ 1.89
DENND4A-208ENST00000568515 PTMSP20962 102 aa26.87■■□□□ 1.89
DENND4A-208ENST00000568515 PIK3R4Q99570 1358 aa26.87■■□□□ 1.89
DENND4A-208ENST00000568515 FAM135BQ49AJ0 1406 aa26.87■■□□□ 1.89
DENND4A-208ENST00000568515 CLTCQ00610 1675 aaKnown RBP26.87■■□□□ 1.89
DENND4A-208ENST00000568515 K7ELQ4 463 aaPredicted RBP26.86■■□□□ 1.89
DENND4A-208ENST00000568515 GAS2L3Q86XJ1 694 aa26.86■■□□□ 1.89
DENND4A-208ENST00000568515 PTCH1Q13635 1447 aa26.85■■□□□ 1.89
DENND4A-208ENST00000568515 ARHGAP31Q2M1Z3 1444 aa26.85■■□□□ 1.89
DENND4A-208ENST00000568515 SLC52A1Q9NWF4 448 aa26.84■■□□□ 1.89
DENND4A-208ENST00000568515 FOXD4L1Q9NU39 408 aa26.84■■□□□ 1.89
DENND4A-208ENST00000568515 NFE2L2Q16236 605 aa26.83■■□□□ 1.89
DENND4A-208ENST00000568515 SIRT2Q8IXJ6 389 aa26.83■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms