RNA–Protein interactions for RNA: ENST00000568205.1

SPG7-218, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-218ENST00000568205 PAK3O75914 559 aaPredicted RBP21.63■■□□□ 1.05
SPG7-218ENST00000568205 TNS3Q68CZ2 1445 aa21.63■■□□□ 1.05
SPG7-218ENST00000568205 NSD3Q9BZ95 1437 aa21.63■■□□□ 1.05
SPG7-218ENST00000568205 SPATA31A3Q5VYP0 1347 aa21.62■■□□□ 1.05
SPG7-218ENST00000568205 LRRC59Q96AG4 307 aaKnown RBP21.62■■□□□ 1.05
SPG7-218ENST00000568205 MON2Q7Z3U7 1717 aa21.62■■□□□ 1.05
SPG7-218ENST00000568205 COL16A1Q07092 1604 aaPredicted RBP21.62■■□□□ 1.05
SPG7-218ENST00000568205 TTC21AQ8NDW8 1320 aa21.61■■□□□ 1.05
SPG7-218ENST00000568205 PHLPP1O60346 1717 aa21.61■■□□□ 1.05
SPG7-218ENST00000568205 DDX10Q13206 875 aaKnown RBP21.61■■□□□ 1.05
SPG7-218ENST00000568205 NRKQ7Z2Y5 1582 aa21.61■■□□□ 1.05
SPG7-218ENST00000568205 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.6■■□□□ 1.05
SPG7-218ENST00000568205 TRPM3Q9HCF6 1732 aaPredicted RBP21.6■■□□□ 1.05
SPG7-218ENST00000568205 LMOD2Q6P5Q4 547 aa21.58■■□□□ 1.05
SPG7-218ENST00000568205 ARHGEF10O15013 1369 aa21.58■■□□□ 1.04
SPG7-218ENST00000568205 PER1O15534 1290 aaPredicted RBP21.57■■□□□ 1.04
SPG7-218ENST00000568205 NME9Q86XW9 330 aa21.57■■□□□ 1.04
SPG7-218ENST00000568205 ABTB2Q8N961 1025 aa21.57■■□□□ 1.04
SPG7-218ENST00000568205 KNSTRNQ9Y448 316 aa21.57■■□□□ 1.04
SPG7-218ENST00000568205 CGNL1Q0VF96 1302 aa21.56■■□□□ 1.04
SPG7-218ENST00000568205 PNPLA6Q8IY17 1366 aa21.55■■□□□ 1.04
SPG7-218ENST00000568205 JCADQ9P266 1359 aa21.54■■□□□ 1.04
SPG7-218ENST00000568205 NUTM2GQ5VZR2 741 aa21.54■■□□□ 1.04
SPG7-218ENST00000568205 ALS2Q96Q42 1657 aa21.53■■□□□ 1.04
SPG7-218ENST00000568205 FYB1O15117 783 aa21.53■■□□□ 1.04
SPG7-218ENST00000568205 USP31Q70CQ4 1352 aa21.52■■□□□ 1.04
SPG7-218ENST00000568205 NLRP6P59044 892 aa21.52■■□□□ 1.04
SPG7-218ENST00000568205 NLRP13Q86W25 1043 aa21.52■■□□□ 1.04
SPG7-218ENST00000568205 ZRANB1Q9UGI0 708 aa21.52■■□□□ 1.04
SPG7-218ENST00000568205 PIK3C2AO00443 1686 aa21.51■■□□□ 1.03
SPG7-218ENST00000568205 AMER1Q5JTC6 1135 aaPredicted RBP21.51■■□□□ 1.03
SPG7-218ENST00000568205 GGNBP2Q9H3C7 697 aa21.51■■□□□ 1.03
SPG7-218ENST00000568205 USP19O94966 1318 aa21.5■■□□□ 1.03
SPG7-218ENST00000568205 NSD2O96028 1365 aa21.49■■□□□ 1.03
SPG7-218ENST00000568205 OVOS2A0A0J9YW53 1432 aa21.49■■□□□ 1.03
SPG7-218ENST00000568205 OVOS2Q6IE36 1432 aa21.49■■□□□ 1.03
SPG7-218ENST00000568205 NPC1L1Q9UHC9 1359 aa21.48■■□□□ 1.03
SPG7-218ENST00000568205 MED1Q15648 1581 aaPredicted RBP21.48■■□□□ 1.03
SPG7-218ENST00000568205 PLEKHG5O94827 1062 aa21.48■■□□□ 1.03
SPG7-218ENST00000568205 COG3Q96JB2 828 aa21.48■■□□□ 1.03
SPG7-218ENST00000568205 CABLES1Q8TDN4 633 aa21.47■■□□□ 1.03
SPG7-218ENST00000568205 COL22A1Q8NFW1 1626 aaPredicted RBP21.47■■□□□ 1.03
SPG7-218ENST00000568205 SHPRHQ149N8 1683 aa21.46■■□□□ 1.03
SPG7-218ENST00000568205 ILDR1Q86SU0 546 aaPredicted RBP21.45■■□□□ 1.02
SPG7-218ENST00000568205 CC2D1BQ5T0F9 858 aaKnown RBP21.44■■□□□ 1.02
SPG7-218ENST00000568205 SPATA31A6Q5VVP1 1343 aa21.44■■□□□ 1.02
SPG7-218ENST00000568205 SLIT3O75094 1523 aa21.44■■□□□ 1.02
SPG7-218ENST00000568205 USP54Q70EL1 1684 aa21.44■■□□□ 1.02
SPG7-218ENST00000568205 KIF20BQ96Q89 1820 aa21.43■■□□□ 1.02
SPG7-218ENST00000568205 HAP1P54257 671 aaPredicted RBP21.43■■□□□ 1.02
SPG7-218ENST00000568205 GCP02774 474 aa21.42■■□□□ 1.02
SPG7-218ENST00000568205 MORC1Q86VD1 984 aa21.42■■□□□ 1.02
SPG7-218ENST00000568205 KCNH5Q8NCM2 988 aa21.42■■□□□ 1.02
SPG7-218ENST00000568205 CNGB1Q14028 1251 aaPredicted RBP21.41■■□□□ 1.02
SPG7-218ENST00000568205 MARF1Q9Y4F3 1742 aaKnown RBP21.41■■□□□ 1.02
SPG7-218ENST00000568205 NUTM2BA6NNL0 878 aaPredicted RBP21.4■■□□□ 1.02
SPG7-218ENST00000568205 NUTM2EB1AL46 878 aaPredicted RBP21.4■■□□□ 1.02
SPG7-218ENST00000568205 SOX12O15370 315 aa21.4■■□□□ 1.02
SPG7-218ENST00000568205 NUTM2AQ8IVF1 878 aaPredicted RBP21.4■■□□□ 1.02
SPG7-218ENST00000568205 CRYBG1Q9Y4K1 1723 aa21.38■■□□□ 1.01
SPG7-218ENST00000568205 PHRF1Q9P1Y6 1649 aaKnown RBP21.38■■□□□ 1.01
SPG7-218ENST00000568205 NFAT5O94916 1531 aa21.38■■□□□ 1.01
SPG7-218ENST00000568205 ABCA3Q99758 1704 aa21.37■■□□□ 1.01
SPG7-218ENST00000568205 LRP6O75581 1613 aa21.37■■□□□ 1.01
SPG7-218ENST00000568205 ANKRD26Q9UPS8 1709 aa21.36■■□□□ 1.01
SPG7-218ENST00000568205 TNNT2P45379 298 aaPredicted RBP21.36■■□□□ 1.01
SPG7-218ENST00000568205 ZC3H6P61129 1189 aaKnown RBP21.36■■□□□ 1.01
SPG7-218ENST00000568205 CPDO75976 1380 aa21.36■■□□□ 1.01
SPG7-218ENST00000568205 ADAMTS2O95450 1211 aa21.35■■□□□ 1.01
SPG7-218ENST00000568205 FBLN1P23142 703 aa21.35■■□□□ 1.01
SPG7-218ENST00000568205 AATKQ6ZMQ8 1374 aa21.35■■□□□ 1.01
SPG7-218ENST00000568205 PARD3Q8TEW0 1356 aa21.35■■□□□ 1.01
SPG7-218ENST00000568205 KIAA0232Q92628 1395 aa21.35■■□□□ 1.01
SPG7-218ENST00000568205 ARHGEF25Q86VW2 580 aa21.33■■□□□ 1.01
SPG7-218ENST00000568205 PRDM11Q9NQV5 511 aa21.33■■□□□ 1.01
SPG7-218ENST00000568205 ZBTB7CA1YPR0 619 aa21.32■■□□□ 1
SPG7-218ENST00000568205 RRS1Q15050 365 aaKnown RBP21.32■■□□□ 1
SPG7-218ENST00000568205 RALBP1Q15311 655 aa21.32■■□□□ 1
SPG7-218ENST00000568205 MAP3K19Q56UN5 1328 aa21.31■■□□□ 1
SPG7-218ENST00000568205 MEX3CQ5U5Q3 659 aaKnown RBP21.3■■□□□ 1
SPG7-218ENST00000568205 PRKRIP1Q9H875 184 aaPredicted RBP21.3■■□□□ 1
SPG7-218ENST00000568205 FAM83GA6ND36 823 aa21.29■■□□□ 1
SPG7-218ENST00000568205 CHRNA2Q15822 529 aa21.29■■□□□ 1
SPG7-218ENST00000568205 POLKQ9UBT6 870 aa21.29■■□□□ 1
SPG7-218ENST00000568205 EMILIN1Q9Y6C2 1016 aa21.29■■□□□ 1
SPG7-218ENST00000568205 RTL1A6NKG5 1358 aa21.27■■□□□ 1
SPG7-218ENST00000568205 ANP32CO43423 234 aa21.27■■□□□ 1
SPG7-218ENST00000568205 PPP2R1AP30153 589 aa21.27■■□□□ 1
SPG7-218ENST00000568205 AMPHP49418 695 aa21.27■■□□□ 1
SPG7-218ENST00000568205 DIEXFQ68CQ4 756 aaKnown RBP21.27■■□□□ 1
SPG7-218ENST00000568205 C8orf37Q96NL8 207 aa21.27■■□□□ 1
SPG7-218ENST00000568205 SMG6Q86US8 1419 aaKnown RBP21.27■■□□□ 1
SPG7-218ENST00000568205 KIF24Q5T7B8 1368 aa21.26■□□□□ 0.99
SPG7-218ENST00000568205 PPM1GO15355 546 aaPredicted RBP21.25■□□□□ 0.99
SPG7-218ENST00000568205 IP6K1Q92551 441 aa21.25■□□□□ 0.99
SPG7-218ENST00000568205 NGLY1Q96IV0 654 aa21.25■□□□□ 0.99
SPG7-218ENST00000568205 ABCC6O95255 1503 aa21.24■□□□□ 0.99
SPG7-218ENST00000568205 FLT4P35916 1363 aa21.24■□□□□ 0.99
SPG7-218ENST00000568205 HOXC9P31274 260 aa21.24■□□□□ 0.99
SPG7-218ENST00000568205 MTHFSP49914 203 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms