RNA–Protein interactions for RNA: ENST00000566640.1

SIN3A-207, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2

Gene SIN3A, Length 944 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-207ENST00000566640 KIF1BO60333 1816 aa10.44□□□□□ -0.74
SIN3A-207ENST00000566640 SPATA31E1Q6ZUB1 1445 aa10.44□□□□□ -0.74
SIN3A-207ENST00000566640 SLC39A7Q92504 469 aa10.44□□□□□ -0.74
SIN3A-207ENST00000566640 ORAI2Q96SN7 254 aa10.44□□□□□ -0.74
SIN3A-207ENST00000566640 TECPR2O15040 1411 aa10.43□□□□□ -0.74
SIN3A-207ENST00000566640 ADGRF5Q8IZF2 1346 aa10.43□□□□□ -0.74
SIN3A-207ENST00000566640 RIOK3O14730 519 aaKnown RBP10.43□□□□□ -0.74
SIN3A-207ENST00000566640 CCDC144AA2RUR9 1427 aa10.41□□□□□ -0.74
SIN3A-207ENST00000566640 RGS12O14924 1447 aa10.41□□□□□ -0.74
SIN3A-207ENST00000566640 CDC42BPGQ6DT37 1551 aa10.41□□□□□ -0.74
SIN3A-207ENST00000566640 C8orf37Q96NL8 207 aa10.41□□□□□ -0.74
SIN3A-207ENST00000566640 ATMINO43313 823 aaPredicted RBP10.4□□□□□ -0.74
SIN3A-207ENST00000566640 RBM6P78332 1123 aaKnown RBP10.4□□□□□ -0.74
SIN3A-207ENST00000566640 KIF12Q96FN5 646 aa10.4□□□□□ -0.74
SIN3A-207ENST00000566640 MPHOSPH9Q99550 1183 aa10.4□□□□□ -0.74
SIN3A-207ENST00000566640 SCUBE2Q9NQ36 999 aa10.4□□□□□ -0.74
SIN3A-207ENST00000566640 MYOM2P54296 1465 aa10.4□□□□□ -0.74
SIN3A-207ENST00000566640 PIK3C2GO75747 1445 aa10.4□□□□□ -0.75
SIN3A-207ENST00000566640 LRPPRCP42704 1394 aaKnown RBP10.39□□□□□ -0.75
SIN3A-207ENST00000566640 ABCC11Q96J66 1382 aa10.39□□□□□ -0.75
SIN3A-207ENST00000566640 ANKRD30BQ9BXX2 1392 aa10.39□□□□□ -0.75
SIN3A-207ENST00000566640 RAB3GAP2Q9H2M9 1393 aa10.39□□□□□ -0.75
SIN3A-207ENST00000566640 PPLO60437 1756 aa10.39□□□□□ -0.75
SIN3A-207ENST00000566640 ZNF467Q7Z7K2 595 aaPredicted RBP10.39□□□□□ -0.75
SIN3A-207ENST00000566640 FNBP4Q8N3X1 1017 aaPredicted RBP10.39□□□□□ -0.75
SIN3A-207ENST00000566640 QTRT2Q9H974 415 aaKnown RBP10.39□□□□□ -0.75
SIN3A-207ENST00000566640 PCDHB13Q9Y5F0 798 aa10.39□□□□□ -0.75
SIN3A-207ENST00000566640 NPHP3Q7Z494 1330 aa10.38□□□□□ -0.75
SIN3A-207ENST00000566640 PXDNQ92626 1479 aa10.38□□□□□ -0.75
SIN3A-207ENST00000566640 MAP3K13O43283 966 aa10.38□□□□□ -0.75
SIN3A-207ENST00000566640 ADAMTS2O95450 1211 aa10.38□□□□□ -0.75
SIN3A-207ENST00000566640 PLEKHH1Q9ULM0 1364 aa10.38□□□□□ -0.75
SIN3A-207ENST00000566640 RGL3Q3MIN7 710 aa10.37□□□□□ -0.75
SIN3A-207ENST00000566640 ESCO1Q5FWF5 840 aa10.37□□□□□ -0.75
SIN3A-207ENST00000566640 WAPLQ7Z5K2 1190 aa10.37□□□□□ -0.75
SIN3A-207ENST00000566640 NGLY1Q96IV0 654 aa10.37□□□□□ -0.75
SIN3A-207ENST00000566640 TAOK2Q9UL54 1235 aa10.37□□□□□ -0.75
SIN3A-207ENST00000566640 COL22A1Q8NFW1 1626 aaPredicted RBP10.36□□□□□ -0.75
SIN3A-207ENST00000566640 NRXN1Q9ULB1 1477 aa10.36□□□□□ -0.75
SIN3A-207ENST00000566640 ATRNO75882 1429 aa10.36□□□□□ -0.75
SIN3A-207ENST00000566640 YTHDC2Q9H6S0 1430 aaKnown RBP10.35□□□□□ -0.75
SIN3A-207ENST00000566640 FOXO3O43524 673 aa10.35□□□□□ -0.75
SIN3A-207ENST00000566640 TMEM132EQ6IEE7 984 aa10.35□□□□□ -0.75
SIN3A-207ENST00000566640 SIRT1Q96EB6 747 aa10.35□□□□□ -0.75
SIN3A-207ENST00000566640 SGIP1Q9BQI5 828 aa10.35□□□□□ -0.75
SIN3A-207ENST00000566640 STK26Q9P289 416 aa10.35□□□□□ -0.75
SIN3A-207ENST00000566640 USP21Q9UK80 565 aa10.35□□□□□ -0.75
SIN3A-207ENST00000566640 TRPC5Q9UL62 973 aaPredicted RBP10.35□□□□□ -0.75
SIN3A-207ENST00000566640 PCDHB8Q9UN66 801 aa10.35□□□□□ -0.75
SIN3A-207ENST00000566640 SRCAPQ6ZRS2 3230 aa10.34□□□□□ -0.75
SIN3A-207ENST00000566640 IFT172Q9UG01 1749 aa10.34□□□□□ -0.75
SIN3A-207ENST00000566640 IFNL1Q8IU54 200 aa10.34□□□□□ -0.75
SIN3A-207ENST00000566640 C14orf93Q9H972 538 aaKnown RBP10.34□□□□□ -0.75
SIN3A-207ENST00000566640 BCL9LQ86UU0 1499 aa10.34□□□□□ -0.75
SIN3A-207ENST00000566640 XPCQ01831 940 aaPredicted RBP10.33□□□□□ -0.76
SIN3A-207ENST00000566640 BBXQ8WY36 941 aaPredicted RBP10.33□□□□□ -0.76
SIN3A-207ENST00000566640 KNDC1Q76NI1 1749 aa10.33□□□□□ -0.76
SIN3A-207ENST00000566640 ACIN1Q9UKV3 1341 aaKnown RBP10.33□□□□□ -0.76
SIN3A-207ENST00000566640 NUTM2FA1L443 756 aa10.32□□□□□ -0.76
SIN3A-207ENST00000566640 HS6ST3Q8IZP7 471 aa10.32□□□□□ -0.76
SIN3A-207ENST00000566640 MS4A3Q96HJ5 214 aa10.32□□□□□ -0.76
SIN3A-207ENST00000566640 EP400Q96L91 3159 aa10.32□□□□□ -0.76
SIN3A-207ENST00000566640 SPATA31A3Q5VYP0 1347 aa10.32□□□□□ -0.76
SIN3A-207ENST00000566640 ATAD2Q6PL18 1390 aa10.31□□□□□ -0.76
SIN3A-207ENST00000566640 CFAP70Q5T0N1 1121 aa10.31□□□□□ -0.76
SIN3A-207ENST00000566640 SLIT2O94813 1529 aa10.3□□□□□ -0.76
SIN3A-207ENST00000566640 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.3□□□□□ -0.76
SIN3A-207ENST00000566640 PDAP1Q13442 181 aaKnown RBP10.3□□□□□ -0.76
SIN3A-207ENST00000566640 ZFP91Q96JP5 570 aaPredicted RBP10.3□□□□□ -0.76
SIN3A-207ENST00000566640 DHX57Q6P158 1386 aaKnown RBP10.29□□□□□ -0.76
SIN3A-207ENST00000566640 STK25O00506 426 aa10.29□□□□□ -0.76
SIN3A-207ENST00000566640 PLCB2Q00722 1185 aa10.29□□□□□ -0.76
SIN3A-207ENST00000566640 MMRN1Q13201 1228 aa10.29□□□□□ -0.76
SIN3A-207ENST00000566640 GJD4Q96KN9 370 aaPredicted RBP10.29□□□□□ -0.76
SIN3A-207ENST00000566640 FMN2Q9NZ56 1722 aa10.29□□□□□ -0.76
SIN3A-207ENST00000566640 DLC1Q96QB1 1528 aa10.28□□□□□ -0.76
SIN3A-207ENST00000566640 ADGRB1O14514 1584 aa10.28□□□□□ -0.76
SIN3A-207ENST00000566640 TNS3Q68CZ2 1445 aa10.28□□□□□ -0.76
SIN3A-207ENST00000566640 KRT28Q7Z3Y7 464 aa10.28□□□□□ -0.76
SIN3A-207ENST00000566640 PRAM1Q96QH2 718 aa10.28□□□□□ -0.76
SIN3A-207ENST00000566640 PHF8Q9UPP1 1060 aa10.28□□□□□ -0.76
SIN3A-207ENST00000566640 KIF1AQ12756 1690 aa10.28□□□□□ -0.76
SIN3A-207ENST00000566640 SBNO1A3KN83 1393 aa10.27□□□□□ -0.76
SIN3A-207ENST00000566640 ANKARQ7Z5J8 1434 aa10.27□□□□□ -0.77
SIN3A-207ENST00000566640 POTEFA5A3E0 1075 aa10.27□□□□□ -0.77
SIN3A-207ENST00000566640 UNC5CLQ8IV45 518 aa10.27□□□□□ -0.77
SIN3A-207ENST00000566640 RALGAPBQ86X10 1494 aa10.26□□□□□ -0.77
SIN3A-207ENST00000566640 PSEN1P49768 467 aa10.26□□□□□ -0.77
SIN3A-207ENST00000566640 BCL11BQ9C0K0 894 aaPredicted RBP10.26□□□□□ -0.77
SIN3A-207ENST00000566640 ADGRB2O60241 1585 aa10.26□□□□□ -0.77
SIN3A-207ENST00000566640 USP32Q8NFA0 1604 aa10.25□□□□□ -0.77
SIN3A-207ENST00000566640 GLI3P10071 1580 aa10.25□□□□□ -0.77
SIN3A-207ENST00000566640 ATN1P54259 1190 aaPredicted RBP10.24□□□□□ -0.77
SIN3A-207ENST00000566640 PSME1Q06323 249 aa10.24□□□□□ -0.77
SIN3A-207ENST00000566640 SAFB2Q14151 953 aaKnown RBP eCLIP10.24□□□□□ -0.77
SIN3A-207ENST00000566640 NKX1-1Q15270 411 aaPredicted RBP10.24□□□□□ -0.77
SIN3A-207ENST00000566640 CCDC125Q86Z20 511 aa10.24□□□□□ -0.77
SIN3A-207ENST00000566640 CABLES1Q8TDN4 633 aa10.24□□□□□ -0.77
SIN3A-207ENST00000566640 STK24Q9Y6E0 443 aa10.24□□□□□ -0.77
SIN3A-207ENST00000566640 PRR36Q9H6K5 1346 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms