RNA–Protein interactions for RNA: ENST00000565975.5

SPNS1-207, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 1,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-207ENST00000565975 CDC42BPGQ6DT37 1551 aa28.82■■■□□ 2.2
SPNS1-207ENST00000565975 PNNQ9H307 717 aaKnown RBP28.82■■■□□ 2.2
SPNS1-207ENST00000565975 MLECQ14165 292 aa28.81■■■□□ 2.2
SPNS1-207ENST00000565975 NPM2Q86SE8 214 aaKnown RBP28.81■■■□□ 2.2
SPNS1-207ENST00000565975 ZMYM3Q14202 1370 aa28.81■■■□□ 2.2
SPNS1-207ENST00000565975 ADAMTSL3P82987 1691 aa28.81■■■□□ 2.2
SPNS1-207ENST00000565975 U2SURPO15042 1029 aaKnown RBP28.81■■■□□ 2.2
SPNS1-207ENST00000565975 KNDC1Q76NI1 1749 aa28.8■■■□□ 2.2
SPNS1-207ENST00000565975 IL16Q14005 1332 aa28.79■■■□□ 2.2
SPNS1-207ENST00000565975 TMPOP42166 694 aaKnown RBP28.79■■■□□ 2.2
SPNS1-207ENST00000565975 FAM161AQ3B820 660 aa28.79■■■□□ 2.2
SPNS1-207ENST00000565975 SIRT1Q96EB6 747 aa28.79■■■□□ 2.2
SPNS1-207ENST00000565975 MAPK8IP3Q9UPT6 1336 aa28.79■■■□□ 2.2
SPNS1-207ENST00000565975 DIAPH1O60610 1272 aaKnown RBP28.79■■■□□ 2.2
SPNS1-207ENST00000565975 WAPLQ7Z5K2 1190 aa28.79■■■□□ 2.2
SPNS1-207ENST00000565975 PANK1Q8TE04 598 aa28.79■■■□□ 2.2
SPNS1-207ENST00000565975 COG6Q9Y2V7 657 aa28.78■■■□□ 2.2
SPNS1-207ENST00000565975 ESF1Q9H501 851 aaKnown RBP28.77■■■□□ 2.2
SPNS1-207ENST00000565975 TECPR2O15040 1411 aa28.77■■■□□ 2.2
SPNS1-207ENST00000565975 FAM135BQ49AJ0 1406 aa28.77■■■□□ 2.2
SPNS1-207ENST00000565975 HDGFP51858 240 aaKnown RBP28.77■■■□□ 2.2
SPNS1-207ENST00000565975 FRAT1Q92837 279 aaPredicted RBP28.76■■■□□ 2.19
SPNS1-207ENST00000565975 CPSF1Q10570 1443 aaKnown RBP28.75■■■□□ 2.19
SPNS1-207ENST00000565975 DDRGK1Q96HY6 314 aa28.75■■■□□ 2.19
SPNS1-207ENST00000565975 TRIM35Q9UPQ4 493 aa28.74■■■□□ 2.19
SPNS1-207ENST00000565975 EDC4Q6P2E9 1401 aaKnown RBP28.74■■■□□ 2.19
SPNS1-207ENST00000565975 WASLO00401 505 aaPredicted RBP28.73■■■□□ 2.19
SPNS1-207ENST00000565975 IGHDP01880 384 aa28.73■■■□□ 2.19
SPNS1-207ENST00000565975 METP08581 1390 aa28.73■■■□□ 2.19
SPNS1-207ENST00000565975 TNRQ92752 1358 aa28.72■■■□□ 2.19
SPNS1-207ENST00000565975 C8orf34Q49A92 452 aa28.72■■■□□ 2.19
SPNS1-207ENST00000565975 CPS1P31327 1500 aa28.72■■■□□ 2.19
SPNS1-207ENST00000565975 PMFBP1Q8TBY8 1022 aa28.71■■■□□ 2.19
SPNS1-207ENST00000565975 FCHSD2O94868 740 aa28.7■■■□□ 2.19
SPNS1-207ENST00000565975 PPIP5K1Q6PFW1 1433 aa28.7■■■□□ 2.18
SPNS1-207ENST00000565975 POLKQ9UBT6 870 aa28.68■■■□□ 2.18
SPNS1-207ENST00000565975 RLBP1P12271 317 aa28.67■■■□□ 2.18
SPNS1-207ENST00000565975 RGS3P49796 1198 aa28.67■■■□□ 2.18
SPNS1-207ENST00000565975 LRRC7Q96NW7 1537 aa28.67■■■□□ 2.18
SPNS1-207ENST00000565975 ZKSCAN2Q63HK3 967 aa28.66■■■□□ 2.18
SPNS1-207ENST00000565975 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.66■■■□□ 2.18
SPNS1-207ENST00000565975 UBR1Q8IWV7 1749 aa28.65■■■□□ 2.18
SPNS1-207ENST00000565975 RIPK4P57078 832 aa28.65■■■□□ 2.18
SPNS1-207ENST00000565975 TMEM2Q9UHN6 1383 aa28.65■■■□□ 2.18
SPNS1-207ENST00000565975 AATKQ6ZMQ8 1374 aa28.64■■■□□ 2.18
SPNS1-207ENST00000565975 BCL2L13Q9BXK5 485 aa28.64■■■□□ 2.18
SPNS1-207ENST00000565975 MON2Q7Z3U7 1717 aa28.64■■■□□ 2.18
SPNS1-207ENST00000565975 EXOSC9Q06265 439 aaKnown RBP28.64■■■□□ 2.17
SPNS1-207ENST00000565975 TSR2Q969E8 191 aaKnown RBP28.64■■■□□ 2.17
SPNS1-207ENST00000565975 CDK12Q9NYV4 1490 aaPredicted RBP28.63■■■□□ 2.17
SPNS1-207ENST00000565975 MVPQ14764 893 aaKnown RBP28.62■■■□□ 2.17
SPNS1-207ENST00000565975 RSPH6AQ9H0K4 717 aa28.62■■■□□ 2.17
SPNS1-207ENST00000565975 TXNDC2Q86VQ3 553 aa28.62■■■□□ 2.17
SPNS1-207ENST00000565975 NUDT16Q96DE0 195 aaKnown RBP28.62■■■□□ 2.17
SPNS1-207ENST00000565975 TNNQ9UQP3 1299 aa28.62■■■□□ 2.17
SPNS1-207ENST00000565975 CCDC61Q9Y6R9 512 aa28.61■■■□□ 2.17
SPNS1-207ENST00000565975 DZIP1LQ8IYY4 767 aaKnown RBP28.6■■■□□ 2.17
SPNS1-207ENST00000565975 RIMS1Q86UR5 1692 aaKnown RBP28.59■■■□□ 2.17
SPNS1-207ENST00000565975 VIRMAQ69YN4 1812 aaKnown RBP28.59■■■□□ 2.17
SPNS1-207ENST00000565975 AKAP12Q02952 1782 aa28.59■■■□□ 2.17
SPNS1-207ENST00000565975 NEFMP07197 916 aa28.59■■■□□ 2.17
SPNS1-207ENST00000565975 PCDHB15Q9Y5E8 787 aa28.59■■■□□ 2.17
SPNS1-207ENST00000565975 SMC4Q9NTJ3 1288 aa28.59■■■□□ 2.17
SPNS1-207ENST00000565975 MAP2P11137 1827 aaKnown RBP28.59■■■□□ 2.17
SPNS1-207ENST00000565975 RWDD1Q9H446 243 aaPredicted RBP28.57■■■□□ 2.16
SPNS1-207ENST00000565975 C3P01024 1663 aa28.56■■■□□ 2.16
SPNS1-207ENST00000565975 PRKAR2BP31323 418 aa28.56■■■□□ 2.16
SPNS1-207ENST00000565975 NBR1Q14596 966 aa28.56■■■□□ 2.16
SPNS1-207ENST00000565975 FTSJ3Q8IY81 847 aaKnown RBP28.56■■■□□ 2.16
SPNS1-207ENST00000565975 ZNF692Q9BU19 519 aaPredicted RBP28.56■■■□□ 2.16
SPNS1-207ENST00000565975 ITSN1Q15811 1721 aa28.56■■■□□ 2.16
SPNS1-207ENST00000565975 ADAMTS13Q76LX8 1427 aa28.56■■■□□ 2.16
SPNS1-207ENST00000565975 SSH1Q8WYL5 1049 aa28.55■■■□□ 2.16
SPNS1-207ENST00000565975 NME9Q86XW9 330 aa28.55■■■□□ 2.16
SPNS1-207ENST00000565975 PLEKHG1Q9ULL1 1385 aa28.54■■■□□ 2.16
SPNS1-207ENST00000565975 IL13P35225 146 aa28.53■■■□□ 2.16
SPNS1-207ENST00000565975 NFE2L2Q16236 605 aa28.53■■■□□ 2.16
SPNS1-207ENST00000565975 FER1L4A9Z1Z3 1794 aa28.53■■■□□ 2.16
SPNS1-207ENST00000565975 PPM1GO15355 546 aaPredicted RBP28.53■■■□□ 2.16
SPNS1-207ENST00000565975 ALDH1L2Q3SY69 923 aa28.53■■■□□ 2.16
SPNS1-207ENST00000565975 ZNF428Q96B54 188 aa28.53■■■□□ 2.16
SPNS1-207ENST00000565975 COG3Q96JB2 828 aa28.53■■■□□ 2.16
SPNS1-207ENST00000565975 CALD1Q05682 793 aaKnown RBP28.52■■■□□ 2.16
SPNS1-207ENST00000565975 ATF7IPQ6VMQ6 1270 aa28.52■■■□□ 2.16
SPNS1-207ENST00000565975 KIF16BQ96L93 1317 aa28.52■■■□□ 2.16
SPNS1-207ENST00000565975 EMILIN1Q9Y6C2 1016 aa28.51■■■□□ 2.16
SPNS1-207ENST00000565975 TRIM27P14373 513 aa28.51■■■□□ 2.15
SPNS1-207ENST00000565975 ROBO2Q9HCK4 1378 aa28.51■■■□□ 2.15
SPNS1-207ENST00000565975 DDX19BQ9UMR2 479 aa28.5■■■□□ 2.15
SPNS1-207ENST00000565975 FBLN1P23142 703 aa28.5■■■□□ 2.15
SPNS1-207ENST00000565975 IPO8O15397 1037 aaKnown RBP28.49■■■□□ 2.15
SPNS1-207ENST00000565975 RTL5Q5HYW3 569 aaPredicted RBP28.49■■■□□ 2.15
SPNS1-207ENST00000565975 BRPF1P55201 1214 aaPredicted RBP28.48■■■□□ 2.15
SPNS1-207ENST00000565975 PRR36Q9H6K5 1346 aa28.48■■■□□ 2.15
SPNS1-207ENST00000565975 TOPAZ1Q8N9V7 1692 aa28.47■■■□□ 2.15
SPNS1-207ENST00000565975 PDZRN3Q9UPQ7 1066 aa28.47■■■□□ 2.15
SPNS1-207ENST00000565975 NOB1Q9ULX3 412 aaKnown RBP28.46■■■□□ 2.15
SPNS1-207ENST00000565975 ZRANB1Q9UGI0 708 aa28.46■■■□□ 2.15
SPNS1-207ENST00000565975 NRKQ7Z2Y5 1582 aa28.46■■■□□ 2.15
SPNS1-207ENST00000565975 PHACTR3Q96KR7 559 aa28.45■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms