RNA–Protein interactions for RNA: ENST00000565848.1

NR4A1-221, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 2

Gene NR4A1, Length 691 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-221ENST00000565848 SRPK2P78362 688 aaKnown RBP17.24■□□□□ 0.35
NR4A1-221ENST00000565848 TRPC5Q9UL62 973 aaPredicted RBP17.24■□□□□ 0.35
NR4A1-221ENST00000565848 CCDC61Q9Y6R9 512 aa17.24■□□□□ 0.35
NR4A1-221ENST00000565848 MON2Q7Z3U7 1717 aa17.24■□□□□ 0.35
NR4A1-221ENST00000565848 PPIP5K1Q6PFW1 1433 aa17.23■□□□□ 0.35
NR4A1-221ENST00000565848 PLEKHG3A1L390 1219 aa17.23■□□□□ 0.35
NR4A1-221ENST00000565848 POLR3AO14802 1390 aaPredicted RBP17.23■□□□□ 0.35
NR4A1-221ENST00000565848 NRKQ7Z2Y5 1582 aa17.23■□□□□ 0.35
NR4A1-221ENST00000565848 ANKRD36BQ8N2N9 1353 aa17.21■□□□□ 0.35
NR4A1-221ENST00000565848 NCBP3Q53F19 620 aaKnown RBP17.21■□□□□ 0.35
NR4A1-221ENST00000565848 SLC12A5Q9H2X9 1139 aa17.2■□□□□ 0.34
NR4A1-221ENST00000565848 SSH2Q76I76 1423 aa17.19■□□□□ 0.34
NR4A1-221ENST00000565848 A0A1W2PP64 1363 aa17.18■□□□□ 0.34
NR4A1-221ENST00000565848 PER1O15534 1290 aaPredicted RBP17.18■□□□□ 0.34
NR4A1-221ENST00000565848 KCNA4P22459 653 aa17.18■□□□□ 0.34
NR4A1-221ENST00000565848 CNKSR2Q8WXI2 1034 aa17.18■□□□□ 0.34
NR4A1-221ENST00000565848 ORAI2Q96SN7 254 aa17.18■□□□□ 0.34
NR4A1-221ENST00000565848 CABP1Q9NZU7 370 aa17.18■□□□□ 0.34
NR4A1-221ENST00000565848 NHSL1Q5SYE7 1610 aa17.18■□□□□ 0.34
NR4A1-221ENST00000565848 CCDC125Q86Z20 511 aa17.17■□□□□ 0.34
NR4A1-221ENST00000565848 TRPM3Q9HCF6 1732 aaPredicted RBP17.16■□□□□ 0.34
NR4A1-221ENST00000565848 NUTM2FA1L443 756 aa17.16■□□□□ 0.34
NR4A1-221ENST00000565848 FNBP4Q8N3X1 1017 aaPredicted RBP17.15■□□□□ 0.34
NR4A1-221ENST00000565848 CARD14Q9BXL6 1004 aa17.15■□□□□ 0.34
NR4A1-221ENST00000565848 ACEP12821 1306 aa17.15■□□□□ 0.34
NR4A1-221ENST00000565848 USP6P35125 1406 aa17.14■□□□□ 0.33
NR4A1-221ENST00000565848 DDX10Q13206 875 aaKnown RBP17.14■□□□□ 0.33
NR4A1-221ENST00000565848 PANK3Q9H999 370 aa17.14■□□□□ 0.33
NR4A1-221ENST00000565848 PHF8Q9UPP1 1060 aa17.14■□□□□ 0.33
NR4A1-221ENST00000565848 USP54Q70EL1 1684 aa17.13■□□□□ 0.33
NR4A1-221ENST00000565848 BRD4O60885 1362 aaPredicted RBP17.13■□□□□ 0.33
NR4A1-221ENST00000565848 EDC4Q6P2E9 1401 aaKnown RBP17.13■□□□□ 0.33
NR4A1-221ENST00000565848 PXDNQ92626 1479 aa17.12■□□□□ 0.33
NR4A1-221ENST00000565848 ESCO1Q5FWF5 840 aa17.12■□□□□ 0.33
NR4A1-221ENST00000565848 TMC1Q8TDI8 760 aa17.12■□□□□ 0.33
NR4A1-221ENST00000565848 POLR3GLQ9BT43 218 aa17.12■□□□□ 0.33
NR4A1-221ENST00000565848 ZNF692Q9BU19 519 aaPredicted RBP17.12■□□□□ 0.33
NR4A1-221ENST00000565848 TERF2IPQ9NYB0 399 aa17.12■□□□□ 0.33
NR4A1-221ENST00000565848 NPC1L1Q9UHC9 1359 aa17.12■□□□□ 0.33
NR4A1-221ENST00000565848 DEFB132Q7Z7B7 95 aa17.11■□□□□ 0.33
NR4A1-221ENST00000565848 SOS2Q07890 1332 aaPredicted RBP17.11■□□□□ 0.33
NR4A1-221ENST00000565848 ALS2Q96Q42 1657 aa17.1■□□□□ 0.33
NR4A1-221ENST00000565848 ANKRD26Q9UPS8 1709 aa17.1■□□□□ 0.33
NR4A1-221ENST00000565848 MARF1Q9Y4F3 1742 aaKnown RBP17.1■□□□□ 0.33
NR4A1-221ENST00000565848 PMFBP1Q8TBY8 1022 aa17.1■□□□□ 0.33
NR4A1-221ENST00000565848 GJD4Q96KN9 370 aaPredicted RBP17.1■□□□□ 0.33
NR4A1-221ENST00000565848 KTN1Q86UP2 1357 aaKnown RBP17.1■□□□□ 0.33
NR4A1-221ENST00000565848 NSD3Q9BZ95 1437 aa17.1■□□□□ 0.33
NR4A1-221ENST00000565848 KIF20BQ96Q89 1820 aa17.1■□□□□ 0.33
NR4A1-221ENST00000565848 XPCQ01831 940 aaPredicted RBP17.09■□□□□ 0.33
NR4A1-221ENST00000565848 HDGFL2Q7Z4V5 671 aaPredicted RBP17.09■□□□□ 0.33
NR4A1-221ENST00000565848 PIK3C2AO00443 1686 aa17.09■□□□□ 0.33
NR4A1-221ENST00000565848 ATRNO75882 1429 aa17.08■□□□□ 0.32
NR4A1-221ENST00000565848 SF3B2Q13435 895 aaKnown RBP17.08■□□□□ 0.32
NR4A1-221ENST00000565848 AMER1Q5JTC6 1135 aaPredicted RBP17.08■□□□□ 0.32
NR4A1-221ENST00000565848 NPHP3Q7Z494 1330 aa17.06■□□□□ 0.32
NR4A1-221ENST00000565848 PLEKHG5O94827 1062 aa17.06■□□□□ 0.32
NR4A1-221ENST00000565848 NGDNQ8NEJ9 315 aaKnown RBP17.06■□□□□ 0.32
NR4A1-221ENST00000565848 SBNO1A3KN83 1393 aa17.05■□□□□ 0.32
NR4A1-221ENST00000565848 TTC21BQ7Z4L5 1316 aa17.05■□□□□ 0.32
NR4A1-221ENST00000565848 FOXO3O43524 673 aa17.05■□□□□ 0.32
NR4A1-221ENST00000565848 CRYBG1Q9Y4K1 1723 aa17.04■□□□□ 0.32
NR4A1-221ENST00000565848 NSD2O96028 1365 aa17.04■□□□□ 0.32
NR4A1-221ENST00000565848 TTC21AQ8NDW8 1320 aa17.04■□□□□ 0.32
NR4A1-221ENST00000565848 OVOS2A0A0J9YW53 1432 aa17.04■□□□□ 0.32
NR4A1-221ENST00000565848 OVOS2Q6IE36 1432 aa17.04■□□□□ 0.32
NR4A1-221ENST00000565848 USP31Q70CQ4 1352 aa17.03■□□□□ 0.32
NR4A1-221ENST00000565848 PSDA5PKW4 1024 aaPredicted RBP17.03■□□□□ 0.32
NR4A1-221ENST00000565848 BCL9LQ86UU0 1499 aa17.02■□□□□ 0.32
NR4A1-221ENST00000565848 FYB1O15117 783 aa17.02■□□□□ 0.32
NR4A1-221ENST00000565848 CGNL1Q0VF96 1302 aa17.01■□□□□ 0.31
NR4A1-221ENST00000565848 KRT28Q7Z3Y7 464 aa17.01■□□□□ 0.31
NR4A1-221ENST00000565848 UNC5CLQ8IV45 518 aa17.01■□□□□ 0.31
NR4A1-221ENST00000565848 CCDC9Q9Y3X0 531 aaKnown RBP17.01■□□□□ 0.31
NR4A1-221ENST00000565848 KNSTRNQ9Y448 316 aa17.01■□□□□ 0.31
NR4A1-221ENST00000565848 PARD3Q8TEW0 1356 aa17.01■□□□□ 0.31
NR4A1-221ENST00000565848 COL22A1Q8NFW1 1626 aaPredicted RBP17■□□□□ 0.31
NR4A1-221ENST00000565848 PSME1Q06323 249 aa17■□□□□ 0.31
NR4A1-221ENST00000565848 TNS3Q68CZ2 1445 aa17■□□□□ 0.31
NR4A1-221ENST00000565848 BLMP54132 1417 aaPredicted RBP16.99■□□□□ 0.31
NR4A1-221ENST00000565848 HAP1P54257 671 aaPredicted RBP16.99■□□□□ 0.31
NR4A1-221ENST00000565848 SEPT12Q8IYM1 358 aa16.99■□□□□ 0.31
NR4A1-221ENST00000565848 SLIT3O75094 1523 aa16.99■□□□□ 0.31
NR4A1-221ENST00000565848 SPATA31A3Q5VYP0 1347 aa16.98■□□□□ 0.31
NR4A1-221ENST00000565848 EP400Q96L91 3159 aa16.98■□□□□ 0.31
NR4A1-221ENST00000565848 A0A0G2JS52 829 aa16.98■□□□□ 0.31
NR4A1-221ENST00000565848 MYT1Q01538 1121 aa16.98■□□□□ 0.31
NR4A1-221ENST00000565848 DIEXFQ68CQ4 756 aaKnown RBP16.98■□□□□ 0.31
NR4A1-221ENST00000565848 ABCA3Q99758 1704 aa16.98■□□□□ 0.31
NR4A1-221ENST00000565848 NME9Q86XW9 330 aa16.97■□□□□ 0.31
NR4A1-221ENST00000565848 USP19O94966 1318 aa16.96■□□□□ 0.31
NR4A1-221ENST00000565848 PHRF1Q9P1Y6 1649 aaKnown RBP16.96■□□□□ 0.31
NR4A1-221ENST00000565848 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.96■□□□□ 0.31
NR4A1-221ENST00000565848 PRKRIP1Q9H875 184 aaPredicted RBP16.95■□□□□ 0.3
NR4A1-221ENST00000565848 NFAT5O94916 1531 aa16.95■□□□□ 0.3
NR4A1-221ENST00000565848 ARHGEF10O15013 1369 aa16.94■□□□□ 0.3
NR4A1-221ENST00000565848 KRT27Q7Z3Y8 459 aa16.94■□□□□ 0.3
NR4A1-221ENST00000565848 GGNBP2Q9H3C7 697 aa16.93■□□□□ 0.3
NR4A1-221ENST00000565848 AATKQ6ZMQ8 1374 aa16.92■□□□□ 0.3
NR4A1-221ENST00000565848 LMOD2Q6P5Q4 547 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms