RNA–Protein interactions for RNA: ENST00000563383.1

CX3CL1-202, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 5 BASIC

Gene CX3CL1, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-202ENST00000563383 HECW2Q9P2P5 1572 aa12.87□□□□□ -0.35
CX3CL1-202ENST00000563383 EFCAB6Q5THR3 1501 aa12.87□□□□□ -0.35
CX3CL1-202ENST00000563383 MADDQ8WXG6 1647 aa12.87□□□□□ -0.35
CX3CL1-202ENST00000563383 HMOX1P09601 288 aa12.87□□□□□ -0.35
CX3CL1-202ENST00000563383 ZRANB1Q9UGI0 708 aa12.87□□□□□ -0.35
CX3CL1-202ENST00000563383 FOXD4L5Q5VV16 416 aaPredicted RBP12.86□□□□□ -0.35
CX3CL1-202ENST00000563383 FOXD4L4Q8WXT5 416 aaPredicted RBP12.86□□□□□ -0.35
CX3CL1-202ENST00000563383 RUNDC1Q96C34 613 aa12.86□□□□□ -0.35
CX3CL1-202ENST00000563383 STAC3Q96MF2 364 aa12.86□□□□□ -0.35
CX3CL1-202ENST00000563383 APBB1O00213 710 aa12.86□□□□□ -0.35
CX3CL1-202ENST00000563383 CLCN1P35523 988 aa12.86□□□□□ -0.35
CX3CL1-202ENST00000563383 EXOSC9Q06265 439 aaKnown RBP12.85□□□□□ -0.35
CX3CL1-202ENST00000563383 ABCA6Q8N139 1617 aa12.85□□□□□ -0.35
CX3CL1-202ENST00000563383 C1orf115Q9H7X2 142 aa12.85□□□□□ -0.35
CX3CL1-202ENST00000563383 MLH3Q9UHC1 1453 aa12.85□□□□□ -0.35
CX3CL1-202ENST00000563383 RNF17Q9BXT8 1623 aaKnown RBP12.85□□□□□ -0.35
CX3CL1-202ENST00000563383 ARAP3Q8WWN8 1544 aa12.85□□□□□ -0.35
CX3CL1-202ENST00000563383 ANKRD45Q5TZF3 282 aa12.85□□□□□ -0.35
CX3CL1-202ENST00000563383 HDGFL2Q7Z4V5 671 aaPredicted RBP12.85□□□□□ -0.35
CX3CL1-202ENST00000563383 TRMT2AQ8IZ69 625 aaKnown RBP12.85□□□□□ -0.35
CX3CL1-202ENST00000563383 ERVK-7P63135 1459 aa12.84□□□□□ -0.35
CX3CL1-202ENST00000563383 DDX11L8A8MPP1 907 aa12.84□□□□□ -0.35
CX3CL1-202ENST00000563383 NUTM2GQ5VZR2 741 aa12.84□□□□□ -0.35
CX3CL1-202ENST00000563383 TNPO1Q92973 898 aaKnown RBP12.84□□□□□ -0.35
CX3CL1-202ENST00000563383 GBP4Q96PP9 640 aa12.84□□□□□ -0.35
CX3CL1-202ENST00000563383 KIF1BO60333 1816 aa12.84□□□□□ -0.35
CX3CL1-202ENST00000563383 ABCC3O15438 1527 aa12.84□□□□□ -0.35
CX3CL1-202ENST00000563383 MVPQ14764 893 aaKnown RBP12.83□□□□□ -0.35
CX3CL1-202ENST00000563383 RBM42Q9BTD8 480 aaKnown RBP12.83□□□□□ -0.35
CX3CL1-202ENST00000563383 DDX49Q9Y6V7 483 aaKnown RBP12.83□□□□□ -0.35
CX3CL1-202ENST00000563383 PDCL3Q9H2J4 239 aa12.83□□□□□ -0.36
CX3CL1-202ENST00000563383 TERF2IPQ9NYB0 399 aa12.83□□□□□ -0.36
CX3CL1-202ENST00000563383 FRMPD1Q5SYB0 1578 aa12.83□□□□□ -0.36
CX3CL1-202ENST00000563383 MROH1Q8NDA8 1641 aa12.83□□□□□ -0.36
CX3CL1-202ENST00000563383 GAS2L3Q86XJ1 694 aa12.83□□□□□ -0.36
CX3CL1-202ENST00000563383 FAM13BQ9NYF5 915 aa12.83□□□□□ -0.36
CX3CL1-202ENST00000563383 RIMBP3CA6NJZ7 1639 aa12.82□□□□□ -0.36
CX3CL1-202ENST00000563383 RIMBP3BA6NNM3 1639 aa12.82□□□□□ -0.36
CX3CL1-202ENST00000563383 RIMBP3Q9UFD9 1639 aa12.82□□□□□ -0.36
CX3CL1-202ENST00000563383 CALD1Q05682 793 aaKnown RBP12.82□□□□□ -0.36
CX3CL1-202ENST00000563383 POLR1AO95602 1720 aaPredicted RBP12.82□□□□□ -0.36
CX3CL1-202ENST00000563383 MROH2AA6NES4 1674 aa12.82□□□□□ -0.36
CX3CL1-202ENST00000563383 MSNP26038 577 aaKnown RBP12.82□□□□□ -0.36
CX3CL1-202ENST00000563383 RRS1Q15050 365 aaKnown RBP12.82□□□□□ -0.36
CX3CL1-202ENST00000563383 NOB1Q9ULX3 412 aaKnown RBP12.82□□□□□ -0.36
CX3CL1-202ENST00000563383 ERBB4Q15303 1308 aa12.82□□□□□ -0.36
CX3CL1-202ENST00000563383 RPGRIP1LQ68CZ1 1315 aa12.82□□□□□ -0.36
CX3CL1-202ENST00000563383 NEO1Q92859 1461 aa12.81□□□□□ -0.36
CX3CL1-202ENST00000563383 GOLGA6L22H0YM25 854 aa12.81□□□□□ -0.36
CX3CL1-202ENST00000563383 ASXL1Q8IXJ9 1541 aa12.81□□□□□ -0.36
CX3CL1-202ENST00000563383 KIAA1211Q6ZU35 1233 aa12.8□□□□□ -0.36
CX3CL1-202ENST00000563383 MPNDQ8N594 471 aa12.8□□□□□ -0.36
CX3CL1-202ENST00000563383 PRDM4Q9UKN5 801 aa12.8□□□□□ -0.36
CX3CL1-202ENST00000563383 FOXD4L6Q3SYB3 417 aaPredicted RBP12.8□□□□□ -0.36
CX3CL1-202ENST00000563383 FOXD4L3Q6VB84 417 aaPredicted RBP12.8□□□□□ -0.36
CX3CL1-202ENST00000563383 NME9Q86XW9 330 aa12.8□□□□□ -0.36
CX3CL1-202ENST00000563383 THUMPD2Q9BTF0 503 aaKnown RBP12.8□□□□□ -0.36
CX3CL1-202ENST00000563383 FSD2A1L4K1 749 aa12.8□□□□□ -0.36
CX3CL1-202ENST00000563383 SSH1Q8WYL5 1049 aa12.8□□□□□ -0.36
CX3CL1-202ENST00000563383 TRIM27P14373 513 aa12.79□□□□□ -0.36
CX3CL1-202ENST00000563383 AEBP2Q6ZN18 517 aaPredicted RBP12.79□□□□□ -0.36
CX3CL1-202ENST00000563383 TMEM57Q8N5G2 664 aa12.79□□□□□ -0.36
CX3CL1-202ENST00000563383 MAP3K4Q9Y6R4 1608 aa12.79□□□□□ -0.36
CX3CL1-202ENST00000563383 SSFA2P28290 1259 aa12.79□□□□□ -0.36
CX3CL1-202ENST00000563383 NASPP49321 788 aaPredicted RBP12.79□□□□□ -0.36
CX3CL1-202ENST00000563383 LMOD2Q6P5Q4 547 aa12.79□□□□□ -0.36
CX3CL1-202ENST00000563383 R3HCC1Q9Y3T6 440 aaKnown RBP12.79□□□□□ -0.36
CX3CL1-202ENST00000563383 BBXQ8WY36 941 aaPredicted RBP12.78□□□□□ -0.36
CX3CL1-202ENST00000563383 MCTP1Q6DN14 999 aa12.78□□□□□ -0.36
CX3CL1-202ENST00000563383 EMILIN1Q9Y6C2 1016 aa12.78□□□□□ -0.36
CX3CL1-202ENST00000563383 PIK3C2GO75747 1445 aa12.78□□□□□ -0.36
CX3CL1-202ENST00000563383 DIP2CQ9Y2E4 1556 aa12.78□□□□□ -0.36
CX3CL1-202ENST00000563383 FYB1O15117 783 aa12.77□□□□□ -0.36
CX3CL1-202ENST00000563383 A0A1W2PP64 1363 aa12.77□□□□□ -0.36
CX3CL1-202ENST00000563383 CAVIN1Q6NZI2 390 aaKnown RBP12.77□□□□□ -0.37
CX3CL1-202ENST00000563383 DDX19BQ9UMR2 479 aa12.77□□□□□ -0.37
CX3CL1-202ENST00000563383 ZMYM3Q14202 1370 aa12.77□□□□□ -0.37
CX3CL1-202ENST00000563383 NOL8Q76FK4 1167 aaKnown RBP12.76□□□□□ -0.37
CX3CL1-202ENST00000563383 LTV1Q96GA3 475 aaPredicted RBP12.76□□□□□ -0.37
CX3CL1-202ENST00000563383 DEPDC5O75140 1603 aa12.76□□□□□ -0.37
CX3CL1-202ENST00000563383 RIPK4P57078 832 aa12.75□□□□□ -0.37
CX3CL1-202ENST00000563383 ZHX1Q9UKY1 873 aaPredicted RBP12.75□□□□□ -0.37
CX3CL1-202ENST00000563383 CD2BP2O95400 341 aaKnown RBP12.75□□□□□ -0.37
CX3CL1-202ENST00000563383 TPM2P07951 284 aa12.75□□□□□ -0.37
CX3CL1-202ENST00000563383 ATF7IPQ6VMQ6 1270 aa12.75□□□□□ -0.37
CX3CL1-202ENST00000563383 RNF214Q8ND24 703 aa12.75□□□□□ -0.37
CX3CL1-202ENST00000563383 VWDEQ8N2E2 1590 aa12.74□□□□□ -0.37
CX3CL1-202ENST00000563383 RIMS2Q9UQ26 1411 aa12.74□□□□□ -0.37
CX3CL1-202ENST00000563383 DIAPH1O60610 1272 aaKnown RBP12.74□□□□□ -0.37
CX3CL1-202ENST00000563383 DNTTIP2Q5QJE6 756 aaKnown RBP12.74□□□□□ -0.37
CX3CL1-202ENST00000563383 WDR63Q8IWG1 891 aa12.74□□□□□ -0.37
CX3CL1-202ENST00000563383 NUDT16Q96DE0 195 aaKnown RBP12.74□□□□□ -0.37
CX3CL1-202ENST00000563383 YTHDC2Q9H6S0 1430 aaKnown RBP12.74□□□□□ -0.37
CX3CL1-202ENST00000563383 PTMAP06454 111 aaKnown RBP12.73□□□□□ -0.37
CX3CL1-202ENST00000563383 KDM5AP29375 1690 aaKnown RBP12.73□□□□□ -0.37
CX3CL1-202ENST00000563383 LTKP29376 864 aa12.73□□□□□ -0.37
CX3CL1-202ENST00000563383 PRKAR2BP31323 418 aa12.73□□□□□ -0.37
CX3CL1-202ENST00000563383 CHAMP1Q96JM3 812 aa12.73□□□□□ -0.37
CX3CL1-202ENST00000563383 EID1Q9Y6B2 187 aa12.73□□□□□ -0.37
CX3CL1-202ENST00000563383 MYOM2P54296 1465 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms