RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 ERVK-7P63135 1459 aa8.73□□□□□ -1.01
CDH13-206ENST00000562601 TYW1BQ6NUM6 668 aa8.73□□□□□ -1.01
CDH13-206ENST00000562601 ZDHHC16Q969W1 377 aa8.73□□□□□ -1.01
CDH13-206ENST00000562601 UNC13BO14795 1591 aa8.73□□□□□ -1.01
CDH13-206ENST00000562601 A2ML1A8K2U0 1454 aa8.72□□□□□ -1.01
CDH13-206ENST00000562601 DDX12PQ92771 950 aa8.72□□□□□ -1.01
CDH13-206ENST00000562601 NUP155O75694 1391 aa8.72□□□□□ -1.01
CDH13-206ENST00000562601 GCC2Q8IWJ2 1684 aa8.72□□□□□ -1.01
CDH13-206ENST00000562601 NAIPQ13075 1403 aa8.71□□□□□ -1.01
CDH13-206ENST00000562601 LMTK2Q8IWU2 1503 aa8.71□□□□□ -1.01
CDH13-206ENST00000562601 SPATA31D1Q6ZQQ2 1576 aa8.71□□□□□ -1.02
CDH13-206ENST00000562601 PCDHGA10Q9Y5H3 936 aa8.71□□□□□ -1.02
CDH13-206ENST00000562601 EFCAB6Q5THR3 1501 aa8.7□□□□□ -1.02
CDH13-206ENST00000562601 IQGAP3Q86VI3 1631 aa8.7□□□□□ -1.02
CDH13-206ENST00000562601 E9PCH4 1651 aa8.7□□□□□ -1.02
CDH13-206ENST00000562601 TET3O43151 1660 aa8.7□□□□□ -1.02
CDH13-206ENST00000562601 NBR1Q14596 966 aa8.7□□□□□ -1.02
CDH13-206ENST00000562601 SMYD5Q6GMV2 418 aa8.7□□□□□ -1.02
CDH13-206ENST00000562601 TRIM52Q96A61 297 aa8.7□□□□□ -1.02
CDH13-206ENST00000562601 BCL2L12Q9HB09 334 aa8.7□□□□□ -1.02
CDH13-206ENST00000562601 ARHGAP31Q2M1Z3 1444 aa8.7□□□□□ -1.02
CDH13-206ENST00000562601 UGGT1Q9NYU2 1555 aa8.69□□□□□ -1.02
CDH13-206ENST00000562601 GRXCR2A6NFK2 248 aa8.69□□□□□ -1.02
CDH13-206ENST00000562601 NLRP1Q9C000 1473 aa8.69□□□□□ -1.02
CDH13-206ENST00000562601 SYNMO15061 1565 aa8.69□□□□□ -1.02
CDH13-206ENST00000562601 PIK3C2BO00750 1634 aa8.69□□□□□ -1.02
CDH13-206ENST00000562601 UBR1Q8IWV7 1749 aa8.68□□□□□ -1.02
CDH13-206ENST00000562601 ARHGAP33O14559 1287 aa8.68□□□□□ -1.02
CDH13-206ENST00000562601 PTPREP23469 700 aa8.68□□□□□ -1.02
CDH13-206ENST00000562601 IDI1Q13907 227 aa8.68□□□□□ -1.02
CDH13-206ENST00000562601 THEMISQ8N1K5 641 aaPredicted RBP8.68□□□□□ -1.02
CDH13-206ENST00000562601 HFM1A2PYH4 1435 aa8.68□□□□□ -1.02
CDH13-206ENST00000562601 MYO5BQ9ULV0 1848 aa8.68□□□□□ -1.02
CDH13-206ENST00000562601 TULP1O00294 542 aaPredicted RBP8.67□□□□□ -1.02
CDH13-206ENST00000562601 POLR1AO95602 1720 aaPredicted RBP8.67□□□□□ -1.02
CDH13-206ENST00000562601 NOS1P29475 1434 aa8.66□□□□□ -1.02
CDH13-206ENST00000562601 SEMA3EO15041 775 aa8.66□□□□□ -1.02
CDH13-206ENST00000562601 EN1Q05925 392 aaPredicted RBP8.66□□□□□ -1.02
CDH13-206ENST00000562601 ANKLE2Q86XL3 938 aa8.66□□□□□ -1.02
CDH13-206ENST00000562601 ADAM33Q9BZ11 813 aa8.66□□□□□ -1.02
CDH13-206ENST00000562601 PLA2R1Q13018 1463 aa8.65□□□□□ -1.02
CDH13-206ENST00000562601 TESPA1A2RU30 521 aaPredicted RBP8.65□□□□□ -1.02
CDH13-206ENST00000562601 KCNK17Q96T54 332 aa8.65□□□□□ -1.02
CDH13-206ENST00000562601 RPRD2Q5VT52 1461 aaKnown RBP8.64□□□□□ -1.03
CDH13-206ENST00000562601 PTPRTO14522 1441 aa8.64□□□□□ -1.03
CDH13-206ENST00000562601 MAP3K7O43318 606 aa8.64□□□□□ -1.03
CDH13-206ENST00000562601 LTKP29376 864 aa8.64□□□□□ -1.03
CDH13-206ENST00000562601 MLLT3P42568 568 aaPredicted RBP8.64□□□□□ -1.03
CDH13-206ENST00000562601 RBM33Q96EV2 1170 aaKnown RBP8.64□□□□□ -1.03
CDH13-206ENST00000562601 NEURL4Q96JN8 1562 aa8.64□□□□□ -1.03
CDH13-206ENST00000562601 SETD5Q9C0A6 1442 aa8.63□□□□□ -1.03
CDH13-206ENST00000562601 SPHKAPQ2M3C7 1700 aa8.63□□□□□ -1.03
CDH13-206ENST00000562601 OSBPP22059 807 aa8.63□□□□□ -1.03
CDH13-206ENST00000562601 LSM11P83369 360 aaKnown RBP eCLIP8.63□□□□□ -1.03
CDH13-206ENST00000562601 NUTM2DQ5VT03 806 aaPredicted RBP8.63□□□□□ -1.03
CDH13-206ENST00000562601 TXNDC2Q86VQ3 553 aa8.63□□□□□ -1.03
CDH13-206ENST00000562601 SLC52A1Q9NWF4 448 aa8.63□□□□□ -1.03
CDH13-206ENST00000562601 ZNF335Q9H4Z2 1342 aaPredicted RBP8.62□□□□□ -1.03
CDH13-206ENST00000562601 PPP1R3GB7ZBB8 358 aa8.62□□□□□ -1.03
CDH13-206ENST00000562601 C6orf132Q5T0Z8 1188 aa8.62□□□□□ -1.03
CDH13-206ENST00000562601 AXIN2Q9Y2T1 843 aa8.62□□□□□ -1.03
CDH13-206ENST00000562601 ADGRB3O60242 1522 aa8.62□□□□□ -1.03
CDH13-206ENST00000562601 IQGAP1P46940 1657 aa8.62□□□□□ -1.03
CDH13-206ENST00000562601 NPHP4O75161 1426 aaPredicted RBP8.62□□□□□ -1.03
CDH13-206ENST00000562601 TMEM131LA2VDJ0 1609 aa8.62□□□□□ -1.03
CDH13-206ENST00000562601 RAB3GAP2Q9H2M9 1393 aa8.61□□□□□ -1.03
CDH13-206ENST00000562601 TMEM2Q9UHN6 1383 aa8.61□□□□□ -1.03
CDH13-206ENST00000562601 PSEN2P49810 448 aa8.61□□□□□ -1.03
CDH13-206ENST00000562601 POTEEQ6S8J3 1075 aa8.61□□□□□ -1.03
CDH13-206ENST00000562601 CERKQ8TCT0 537 aa8.61□□□□□ -1.03
CDH13-206ENST00000562601 BCANQ96GW7 911 aa8.61□□□□□ -1.03
CDH13-206ENST00000562601 EID1Q9Y6B2 187 aa8.61□□□□□ -1.03
CDH13-206ENST00000562601 SLIT1O75093 1534 aa8.6□□□□□ -1.03
CDH13-206ENST00000562601 KDM5AP29375 1690 aaKnown RBP8.6□□□□□ -1.03
CDH13-206ENST00000562601 ARHGAP23Q9P227 1491 aa8.6□□□□□ -1.03
CDH13-206ENST00000562601 TK2O00142 265 aa8.6□□□□□ -1.03
CDH13-206ENST00000562601 MPHOSPH9Q99550 1183 aa8.6□□□□□ -1.03
CDH13-206ENST00000562601 CLTCL1P53675 1640 aa8.6□□□□□ -1.03
CDH13-206ENST00000562601 MED14O60244 1454 aa8.59□□□□□ -1.03
CDH13-206ENST00000562601 SCAF11Q99590 1463 aaKnown RBP8.59□□□□□ -1.03
CDH13-206ENST00000562601 LTBP4Q8N2S1 1624 aa8.59□□□□□ -1.03
CDH13-206ENST00000562601 ZNF326Q5BKZ1 582 aaKnown RBP8.59□□□□□ -1.03
CDH13-206ENST00000562601 SLC4A5Q9BY07 1137 aa8.59□□□□□ -1.03
CDH13-206ENST00000562601 RIMS2Q9UQ26 1411 aa8.59□□□□□ -1.03
CDH13-206ENST00000562601 KIF1BO60333 1816 aa8.59□□□□□ -1.03
CDH13-206ENST00000562601 STRCP1A6NGW2 1772 aa8.58□□□□□ -1.04
CDH13-206ENST00000562601 PPP1R15AO75807 674 aaPredicted RBP8.58□□□□□ -1.04
CDH13-206ENST00000562601 ANKRD13DQ6ZTN6 518 aa8.58□□□□□ -1.04
CDH13-206ENST00000562601 SLC26A8Q96RN1 970 aa8.58□□□□□ -1.04
CDH13-206ENST00000562601 TSR1Q2NL82 804 aaKnown RBP8.57□□□□□ -1.04
CDH13-206ENST00000562601 TRPM2O94759 1503 aa8.57□□□□□ -1.04
CDH13-206ENST00000562601 ZFYVE9O95405 1425 aa8.56□□□□□ -1.04
CDH13-206ENST00000562601 DMRTA1Q5VZB9 504 aa8.56□□□□□ -1.04
CDH13-206ENST00000562601 ADGRD1Q6QNK2 874 aa8.56□□□□□ -1.04
CDH13-206ENST00000562601 ZBED2Q9BTP6 218 aa8.56□□□□□ -1.04
CDH13-206ENST00000562601 PRIM1P49642 420 aaKnown RBP8.55□□□□□ -1.04
CDH13-206ENST00000562601 HDGFP51858 240 aaKnown RBP8.55□□□□□ -1.04
CDH13-206ENST00000562601 FBXO41Q8TF61 875 aa8.55□□□□□ -1.04
CDH13-206ENST00000562601 NUTM2FA1L443 756 aa8.54□□□□□ -1.04
CDH13-206ENST00000562601 ONECUT3O60422 494 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms