RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 LAS1LQ9Y4W2 734 aaKnown RBP18.82■□□□□ 0.6
CRTC3-210ENST00000560927 TRIM35Q9UPQ4 493 aa18.82■□□□□ 0.6
CRTC3-210ENST00000560927 RIMS2Q9UQ26 1411 aa18.82■□□□□ 0.6
CRTC3-210ENST00000560927 PPP6R1Q9UPN7 881 aa18.81■□□□□ 0.6
CRTC3-210ENST00000560927 SPATA31D1Q6ZQQ2 1576 aa18.81■□□□□ 0.6
CRTC3-210ENST00000560927 FBLN1P23142 703 aa18.81■□□□□ 0.6
CRTC3-210ENST00000560927 DEKP35659 375 aaKnown RBP18.81■□□□□ 0.6
CRTC3-210ENST00000560927 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.8■□□□□ 0.6
CRTC3-210ENST00000560927 DDRGK1Q96HY6 314 aa18.8■□□□□ 0.6
CRTC3-210ENST00000560927 PCDHB15Q9Y5E8 787 aa18.8■□□□□ 0.6
CRTC3-210ENST00000560927 DIAPH1O60610 1272 aaKnown RBP18.79■□□□□ 0.6
CRTC3-210ENST00000560927 MAPK8IP3Q9UPT6 1336 aa18.79■□□□□ 0.6
CRTC3-210ENST00000560927 SETD1AO15047 1707 aaKnown RBP18.78■□□□□ 0.6
CRTC3-210ENST00000560927 PNPLA6Q8IY17 1366 aa18.78■□□□□ 0.6
CRTC3-210ENST00000560927 DLC1Q96QB1 1528 aa18.78■□□□□ 0.6
CRTC3-210ENST00000560927 EXOSC9Q06265 439 aaKnown RBP18.78■□□□□ 0.6
CRTC3-210ENST00000560927 SLC4A3P48751 1232 aa18.77■□□□□ 0.6
CRTC3-210ENST00000560927 KIF20BQ96Q89 1820 aa18.77■□□□□ 0.6
CRTC3-210ENST00000560927 RIPK4P57078 832 aa18.76■□□□□ 0.59
CRTC3-210ENST00000560927 RTL5Q5HYW3 569 aaPredicted RBP18.76■□□□□ 0.59
CRTC3-210ENST00000560927 PPM1GO15355 546 aaPredicted RBP18.75■□□□□ 0.59
CRTC3-210ENST00000560927 METP08581 1390 aa18.74■□□□□ 0.59
CRTC3-210ENST00000560927 POLKQ9UBT6 870 aa18.74■□□□□ 0.59
CRTC3-210ENST00000560927 NRXN3Q9Y4C0 1643 aa18.74■□□□□ 0.59
CRTC3-210ENST00000560927 ZKSCAN2Q63HK3 967 aa18.74■□□□□ 0.59
CRTC3-210ENST00000560927 PMFBP1Q8TBY8 1022 aa18.74■□□□□ 0.59
CRTC3-210ENST00000560927 AAMPQ13685 434 aa18.73■□□□□ 0.59
CRTC3-210ENST00000560927 MVPQ14764 893 aaKnown RBP18.73■□□□□ 0.59
CRTC3-210ENST00000560927 ATP7BP35670 1465 aa18.73■□□□□ 0.59
CRTC3-210ENST00000560927 CT47B1P0C2W7 299 aaPredicted RBP18.73■□□□□ 0.59
CRTC3-210ENST00000560927 SSH1Q8WYL5 1049 aa18.73■□□□□ 0.59
CRTC3-210ENST00000560927 SMC4Q9NTJ3 1288 aa18.73■□□□□ 0.59
CRTC3-210ENST00000560927 TXNDC2Q86VQ3 553 aa18.72■□□□□ 0.59
CRTC3-210ENST00000560927 DZIP1LQ8IYY4 767 aaKnown RBP18.72■□□□□ 0.59
CRTC3-210ENST00000560927 FTSJ3Q8IY81 847 aaKnown RBP18.71■□□□□ 0.59
CRTC3-210ENST00000560927 LRRC7Q96NW7 1537 aa18.71■□□□□ 0.59
CRTC3-210ENST00000560927 WASLO00401 505 aaPredicted RBP18.71■□□□□ 0.58
CRTC3-210ENST00000560927 NEFMP07197 916 aa18.71■□□□□ 0.58
CRTC3-210ENST00000560927 IL16Q14005 1332 aa18.7■□□□□ 0.58
CRTC3-210ENST00000560927 NCKAP5LQ9HCH0 1330 aa18.7■□□□□ 0.58
CRTC3-210ENST00000560927 ZMYM3Q14202 1370 aa18.7■□□□□ 0.58
CRTC3-210ENST00000560927 SEC24BO95487 1268 aa18.7■□□□□ 0.58
CRTC3-210ENST00000560927 TRIM27P14373 513 aa18.7■□□□□ 0.58
CRTC3-210ENST00000560927 PPIP5K1Q6PFW1 1433 aa18.7■□□□□ 0.58
CRTC3-210ENST00000560927 FCHSD2O94868 740 aa18.69■□□□□ 0.58
CRTC3-210ENST00000560927 PRKAR2BP31323 418 aa18.69■□□□□ 0.58
CRTC3-210ENST00000560927 RSPH6AQ9H0K4 717 aa18.69■□□□□ 0.58
CRTC3-210ENST00000560927 ZRANB1Q9UGI0 708 aa18.69■□□□□ 0.58
CRTC3-210ENST00000560927 CPSF1Q10570 1443 aaKnown RBP18.69■□□□□ 0.58
CRTC3-210ENST00000560927 NME9Q86XW9 330 aa18.69■□□□□ 0.58
CRTC3-210ENST00000560927 BCL11AQ9H165 835 aa18.69■□□□□ 0.58
CRTC3-210ENST00000560927 PDZRN3Q9UPQ7 1066 aa18.69■□□□□ 0.58
CRTC3-210ENST00000560927 EMILIN1Q9Y6C2 1016 aa18.69■□□□□ 0.58
CRTC3-210ENST00000560927 USP19O94966 1318 aa18.69■□□□□ 0.58
CRTC3-210ENST00000560927 CDC42BPGQ6DT37 1551 aa18.69■□□□□ 0.58
CRTC3-210ENST00000560927 PNNQ9H307 717 aaKnown RBP18.68■□□□□ 0.58
CRTC3-210ENST00000560927 VIRMAQ69YN4 1812 aaKnown RBP18.68■□□□□ 0.58
CRTC3-210ENST00000560927 HMOX1P09601 288 aa18.67■□□□□ 0.58
CRTC3-210ENST00000560927 RWDD1Q9H446 243 aaPredicted RBP18.67■□□□□ 0.58
CRTC3-210ENST00000560927 FAM135BQ49AJ0 1406 aa18.67■□□□□ 0.58
CRTC3-210ENST00000560927 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.67■□□□□ 0.58
CRTC3-210ENST00000560927 PHACTR3Q96KR7 559 aa18.67■□□□□ 0.58
CRTC3-210ENST00000560927 ESF1Q9H501 851 aaKnown RBP18.67■□□□□ 0.58
CRTC3-210ENST00000560927 NOB1Q9ULX3 412 aaKnown RBP18.67■□□□□ 0.58
CRTC3-210ENST00000560927 EDC4Q6P2E9 1401 aaKnown RBP18.66■□□□□ 0.58
CRTC3-210ENST00000560927 MAP2P11137 1827 aaKnown RBP18.65■□□□□ 0.58
CRTC3-210ENST00000560927 ATF7IPQ6VMQ6 1270 aa18.65■□□□□ 0.58
CRTC3-210ENST00000560927 NUDT16Q96DE0 195 aaKnown RBP18.65■□□□□ 0.58
CRTC3-210ENST00000560927 DAXXQ9UER7 740 aaPredicted RBP18.65■□□□□ 0.58
CRTC3-210ENST00000560927 ITPRIPQ8IWB1 547 aa18.64■□□□□ 0.58
CRTC3-210ENST00000560927 THUMPD2Q9BTF0 503 aaKnown RBP18.63■□□□□ 0.57
CRTC3-210ENST00000560927 KIF13AQ9H1H9 1805 aa18.63■□□□□ 0.57
CRTC3-210ENST00000560927 IL13P35225 146 aa18.63■□□□□ 0.57
CRTC3-210ENST00000560927 CPS1P31327 1500 aa18.63■□□□□ 0.57
CRTC3-210ENST00000560927 TMEM57Q8N5G2 664 aa18.62■□□□□ 0.57
CRTC3-210ENST00000560927 USP35Q9P2H5 1018 aa18.62■□□□□ 0.57
CRTC3-210ENST00000560927 CCDC61Q9Y6R9 512 aa18.62■□□□□ 0.57
CRTC3-210ENST00000560927 RRS1Q15050 365 aaKnown RBP18.61■□□□□ 0.57
CRTC3-210ENST00000560927 NFE2L2Q16236 605 aa18.61■□□□□ 0.57
CRTC3-210ENST00000560927 DDX19BQ9UMR2 479 aa18.61■□□□□ 0.57
CRTC3-210ENST00000560927 TECPR2O15040 1411 aa18.61■□□□□ 0.57
CRTC3-210ENST00000560927 TNRQ92752 1358 aa18.61■□□□□ 0.57
CRTC3-210ENST00000560927 PRR36Q9H6K5 1346 aa18.6■□□□□ 0.57
CRTC3-210ENST00000560927 CDK12Q9NYV4 1490 aaPredicted RBP18.59■□□□□ 0.57
CRTC3-210ENST00000560927 KIF16BQ96L93 1317 aa18.59■□□□□ 0.57
CRTC3-210ENST00000560927 KNDC1Q76NI1 1749 aa18.59■□□□□ 0.57
CRTC3-210ENST00000560927 COG3Q96JB2 828 aa18.59■□□□□ 0.57
CRTC3-210ENST00000560927 AATKQ6ZMQ8 1374 aa18.58■□□□□ 0.57
CRTC3-210ENST00000560927 ROBO2Q9HCK4 1378 aa18.58■□□□□ 0.57
CRTC3-210ENST00000560927 TMEM2Q9UHN6 1383 aa18.58■□□□□ 0.57
CRTC3-210ENST00000560927 SIRT1Q96EB6 747 aa18.58■□□□□ 0.57
CRTC3-210ENST00000560927 HDGFP51858 240 aaKnown RBP18.58■□□□□ 0.56
CRTC3-210ENST00000560927 HDAC1Q13547 482 aaPredicted RBP18.58■□□□□ 0.56
CRTC3-210ENST00000560927 NFKBIBQ15653 356 aa18.58■□□□□ 0.56
CRTC3-210ENST00000560927 ALDH1L2Q3SY69 923 aa18.58■□□□□ 0.56
CRTC3-210ENST00000560927 ZBTB40Q9NUA8 1239 aa18.57■□□□□ 0.56
CRTC3-210ENST00000560927 MON2Q7Z3U7 1717 aa18.57■□□□□ 0.56
CRTC3-210ENST00000560927 IPO8O15397 1037 aaKnown RBP18.56■□□□□ 0.56
CRTC3-210ENST00000560927 TSPYL6Q8N831 410 aa18.56■□□□□ 0.56
CRTC3-210ENST00000560927 UBR1Q8IWV7 1749 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms