RNA–Protein interactions for RNA: ENST00000559934.5

PSMA4-215, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 2,741 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-215ENST00000559934 ADGRL1O94910 1474 aa27.42■■□□□ 1.98
PSMA4-215ENST00000559934 PPRC1Q5VV67 1664 aaKnown RBP27.42■■□□□ 1.98
PSMA4-215ENST00000559934 NUCB1Q02818 461 aa27.41■■□□□ 1.98
PSMA4-215ENST00000559934 NCBP3Q53F19 620 aaKnown RBP27.41■■□□□ 1.98
PSMA4-215ENST00000559934 PLEKHF1Q96S99 279 aa27.41■■□□□ 1.98
PSMA4-215ENST00000559934 C14orf93Q9H972 538 aaKnown RBP27.41■■□□□ 1.98
PSMA4-215ENST00000559934 ADGRB1O14514 1584 aa27.4■■□□□ 1.98
PSMA4-215ENST00000559934 CD2BP2O95400 341 aaKnown RBP27.4■■□□□ 1.98
PSMA4-215ENST00000559934 HSP90AA2PQ14568 343 aaPredicted RBP27.4■■□□□ 1.98
PSMA4-215ENST00000559934 CFAP65Q6ZU64 1925 aaKnown RBP27.4■■□□□ 1.98
PSMA4-215ENST00000559934 ADGRB3O60242 1522 aa27.39■■□□□ 1.98
PSMA4-215ENST00000559934 ISY1Q9ULR0 285 aaKnown RBP27.39■■□□□ 1.97
PSMA4-215ENST00000559934 RAB3GAP1Q15042 981 aa27.38■■□□□ 1.97
PSMA4-215ENST00000559934 KIF2CQ99661 725 aa27.38■■□□□ 1.97
PSMA4-215ENST00000559934 TRIM44Q96DX7 344 aaPredicted RBP27.37■■□□□ 1.97
PSMA4-215ENST00000559934 GBP4Q96PP9 640 aa27.37■■□□□ 1.97
PSMA4-215ENST00000559934 CHD1LQ86WJ1 897 aa27.36■■□□□ 1.97
PSMA4-215ENST00000559934 ANKRD36BQ8N2N9 1353 aa27.36■■□□□ 1.97
PSMA4-215ENST00000559934 CABP2Q9NPB3 220 aa27.36■■□□□ 1.97
PSMA4-215ENST00000559934 CIZ1Q9ULV3 898 aaPredicted RBP27.35■■□□□ 1.97
PSMA4-215ENST00000559934 FANCAO15360 1455 aa27.34■■□□□ 1.97
PSMA4-215ENST00000559934 ARAP3Q8WWN8 1544 aa27.34■■□□□ 1.97
PSMA4-215ENST00000559934 GLIPR1L2Q4G1C9 344 aa27.34■■□□□ 1.97
PSMA4-215ENST00000559934 PPLO60437 1756 aa27.34■■□□□ 1.97
PSMA4-215ENST00000559934 RBM42Q9BTD8 480 aaKnown RBP27.33■■□□□ 1.97
PSMA4-215ENST00000559934 TULP4Q9NRJ4 1543 aa27.33■■□□□ 1.97
PSMA4-215ENST00000559934 RRP9O43818 475 aaKnown RBP27.32■■□□□ 1.96
PSMA4-215ENST00000559934 NUTM2DQ5VT03 806 aaPredicted RBP27.32■■□□□ 1.96
PSMA4-215ENST00000559934 GGNBP2Q9H3C7 697 aa27.32■■□□□ 1.96
PSMA4-215ENST00000559934 NSD2O96028 1365 aa27.32■■□□□ 1.96
PSMA4-215ENST00000559934 ABCC11Q96J66 1382 aa27.32■■□□□ 1.96
PSMA4-215ENST00000559934 RIPK4P57078 832 aa27.32■■□□□ 1.96
PSMA4-215ENST00000559934 SAFB2Q14151 953 aaKnown RBP eCLIP27.32■■□□□ 1.96
PSMA4-215ENST00000559934 EVC2Q86UK5 1308 aa27.31■■□□□ 1.96
PSMA4-215ENST00000559934 VSIG10Q8N0Z9 540 aa27.31■■□□□ 1.96
PSMA4-215ENST00000559934 KIF16BQ96L93 1317 aa27.3■■□□□ 1.96
PSMA4-215ENST00000559934 BMP2KLQ5H9B9 411 aa27.3■■□□□ 1.96
PSMA4-215ENST00000559934 UHRF1BP1LA0JNW5 1464 aa27.3■■□□□ 1.96
PSMA4-215ENST00000559934 CFAP74Q9C0B2 1584 aa27.3■■□□□ 1.96
PSMA4-215ENST00000559934 SSFA2P28290 1259 aa27.29■■□□□ 1.96
PSMA4-215ENST00000559934 ANKRD45Q5TZF3 282 aa27.29■■□□□ 1.96
PSMA4-215ENST00000559934 C1orf115Q9H7X2 142 aa27.29■■□□□ 1.96
PSMA4-215ENST00000559934 IPO8O15397 1037 aaKnown RBP27.29■■□□□ 1.96
PSMA4-215ENST00000559934 SKOR2Q2VWA4 1001 aaPredicted RBP27.28■■□□□ 1.96
PSMA4-215ENST00000559934 COL3A1P02461 1466 aaPredicted RBP27.28■■□□□ 1.96
PSMA4-215ENST00000559934 ABCA9Q8IUA7 1624 aa27.28■■□□□ 1.96
PSMA4-215ENST00000559934 IL16Q14005 1332 aa27.27■■□□□ 1.96
PSMA4-215ENST00000559934 K7ELQ4 463 aaPredicted RBP27.26■■□□□ 1.96
PSMA4-215ENST00000559934 TBC1D9Q6ZT07 1266 aa27.26■■□□□ 1.96
PSMA4-215ENST00000559934 GAS2L2Q8NHY3 880 aa27.26■■□□□ 1.96
PSMA4-215ENST00000559934 GLI2P10070 1586 aa27.26■■□□□ 1.95
PSMA4-215ENST00000559934 A0A1W2PP64 1363 aa27.26■■□□□ 1.95
PSMA4-215ENST00000559934 SENP3Q9H4L4 574 aaPredicted RBP27.25■■□□□ 1.95
PSMA4-215ENST00000559934 PPIP5K1Q6PFW1 1433 aa27.25■■□□□ 1.95
PSMA4-215ENST00000559934 AK9Q5TCS8 1911 aa27.24■■□□□ 1.95
PSMA4-215ENST00000559934 PKNOX2Q96KN3 472 aa27.24■■□□□ 1.95
PSMA4-215ENST00000559934 ARHGEF28Q8N1W1 1705 aaKnown RBP27.23■■□□□ 1.95
PSMA4-215ENST00000559934 NPATQ14207 1427 aa27.22■■□□□ 1.95
PSMA4-215ENST00000559934 LMTK2Q8IWU2 1503 aa27.21■■□□□ 1.95
PSMA4-215ENST00000559934 ALDH1L2Q3SY69 923 aa27.2■■□□□ 1.95
PSMA4-215ENST00000559934 ZMYND15Q9H091 742 aa27.2■■□□□ 1.95
PSMA4-215ENST00000559934 KIDINS220Q9ULH0 1771 aa27.2■■□□□ 1.95
PSMA4-215ENST00000559934 NASPP49321 788 aaPredicted RBP27.2■■□□□ 1.94
PSMA4-215ENST00000559934 ZBTB7BO15156 539 aaPredicted RBP27.19■■□□□ 1.94
PSMA4-215ENST00000559934 PTMSP20962 102 aa27.19■■□□□ 1.94
PSMA4-215ENST00000559934 PUS7Q96PZ0 661 aaKnown RBP27.19■■□□□ 1.94
PSMA4-215ENST00000559934 MED14O60244 1454 aa27.19■■□□□ 1.94
PSMA4-215ENST00000559934 CCDC173Q0VFZ6 552 aa27.18■■□□□ 1.94
PSMA4-215ENST00000559934 DDX49Q9Y6V7 483 aaKnown RBP27.18■■□□□ 1.94
PSMA4-215ENST00000559934 SRPK2P78362 688 aaKnown RBP27.17■■□□□ 1.94
PSMA4-215ENST00000559934 SIRT2Q8IXJ6 389 aa27.17■■□□□ 1.94
PSMA4-215ENST00000559934 FYB1O15117 783 aa27.17■■□□□ 1.94
PSMA4-215ENST00000559934 BAG4O95429 457 aaKnown RBP27.17■■□□□ 1.94
PSMA4-215ENST00000559934 GGT6Q6P531 493 aa27.17■■□□□ 1.94
PSMA4-215ENST00000559934 GCC1Q96CN9 775 aa27.17■■□□□ 1.94
PSMA4-215ENST00000559934 PPP1R9BQ96SB3 815 aa27.16■■□□□ 1.94
PSMA4-215ENST00000559934 CAMSAP1Q5T5Y3 1602 aa27.16■■□□□ 1.94
PSMA4-215ENST00000559934 DIAPH1O60610 1272 aaKnown RBP27.16■■□□□ 1.94
PSMA4-215ENST00000559934 STK26Q9P289 416 aa27.15■■□□□ 1.94
PSMA4-215ENST00000559934 GOLGA6L22H0YM25 854 aa27.14■■□□□ 1.94
PSMA4-215ENST00000559934 KIAA1211Q6ZU35 1233 aa27.14■■□□□ 1.94
PSMA4-215ENST00000559934 KLHL40Q2TBA0 621 aa27.14■■□□□ 1.93
PSMA4-215ENST00000559934 THUMPD2Q9BTF0 503 aaKnown RBP27.14■■□□□ 1.93
PSMA4-215ENST00000559934 TPM2P07951 284 aa27.13■■□□□ 1.93
PSMA4-215ENST00000559934 RPGRIP1LQ68CZ1 1315 aa27.13■■□□□ 1.93
PSMA4-215ENST00000559934 TSPYL6Q8N831 410 aa27.12■■□□□ 1.93
PSMA4-215ENST00000559934 ZSCAN30Q86W11 494 aa27.11■■□□□ 1.93
PSMA4-215ENST00000559934 ELL2O00472 640 aaPredicted RBP27.11■■□□□ 1.93
PSMA4-215ENST00000559934 CLEC17AQ6ZS10 378 aa27.11■■□□□ 1.93
PSMA4-215ENST00000559934 MRPL50Q8N5N7 158 aaKnown RBP27.11■■□□□ 1.93
PSMA4-215ENST00000559934 CDC45O75419 566 aa27.1■■□□□ 1.93
PSMA4-215ENST00000559934 GSPT1P15170 499 aaKnown RBP27.1■■□□□ 1.93
PSMA4-215ENST00000559934 MCTP1Q6DN14 999 aa27.1■■□□□ 1.93
PSMA4-215ENST00000559934 LRRC7Q96NW7 1537 aa27.1■■□□□ 1.93
PSMA4-215ENST00000559934 PRKAR2BP31323 418 aa27.1■■□□□ 1.93
PSMA4-215ENST00000559934 FBLN1P23142 703 aa27.09■■□□□ 1.93
PSMA4-215ENST00000559934 VAMP4O75379 141 aa27.09■■□□□ 1.93
PSMA4-215ENST00000559934 NCLP19338 710 aaKnown RBP27.08■■□□□ 1.93
PSMA4-215ENST00000559934 BRPF1P55201 1214 aaPredicted RBP27.08■■□□□ 1.93
PSMA4-215ENST00000559934 ANP32BQ92688 251 aaKnown RBP27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms