RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 PHLPP1O60346 1717 aa10.55□□□□□ -0.72
LRRC28-211ENST00000558890 AKAP12Q02952 1782 aa10.54□□□□□ -0.72
LRRC28-211ENST00000558890 CABP1Q9NZU7 370 aa10.54□□□□□ -0.72
LRRC28-211ENST00000558890 SBNO1A3KN83 1393 aa10.53□□□□□ -0.72
LRRC28-211ENST00000558890 DISP3Q9P2K9 1392 aa10.53□□□□□ -0.72
LRRC28-211ENST00000558890 MON2Q7Z3U7 1717 aa10.53□□□□□ -0.72
LRRC28-211ENST00000558890 ACEP12821 1306 aa10.53□□□□□ -0.72
LRRC28-211ENST00000558890 SPATA31A6Q5VVP1 1343 aa10.53□□□□□ -0.72
LRRC28-211ENST00000558890 CCDC7Q96M83 1385 aa10.52□□□□□ -0.72
LRRC28-211ENST00000558890 SSH2Q76I76 1423 aa10.52□□□□□ -0.73
LRRC28-211ENST00000558890 LRP6O75581 1613 aa10.52□□□□□ -0.73
LRRC28-211ENST00000558890 SRPK2P78362 688 aaKnown RBP10.52□□□□□ -0.73
LRRC28-211ENST00000558890 PSME1Q06323 249 aa10.52□□□□□ -0.73
LRRC28-211ENST00000558890 USP54Q70EL1 1684 aa10.52□□□□□ -0.73
LRRC28-211ENST00000558890 NRKQ7Z2Y5 1582 aa10.52□□□□□ -0.73
LRRC28-211ENST00000558890 CPSF1Q10570 1443 aaKnown RBP10.5□□□□□ -0.73
LRRC28-211ENST00000558890 NGDNQ8NEJ9 315 aaKnown RBP10.5□□□□□ -0.73
LRRC28-211ENST00000558890 SLC12A5Q9H2X9 1139 aa10.5□□□□□ -0.73
LRRC28-211ENST00000558890 KIF7Q2M1P5 1343 aa10.5□□□□□ -0.73
LRRC28-211ENST00000558890 SHPRHQ149N8 1683 aa10.5□□□□□ -0.73
LRRC28-211ENST00000558890 ANKRD36BQ8N2N9 1353 aa10.5□□□□□ -0.73
LRRC28-211ENST00000558890 PPIP5K1Q6PFW1 1433 aa10.5□□□□□ -0.73
LRRC28-211ENST00000558890 CD163L1Q9NR16 1453 aa10.49□□□□□ -0.73
LRRC28-211ENST00000558890 MED1Q15648 1581 aaPredicted RBP10.49□□□□□ -0.73
LRRC28-211ENST00000558890 C11orf95C9JLR9 678 aaPredicted RBP10.49□□□□□ -0.73
LRRC28-211ENST00000558890 WASHC2AQ641Q2 1341 aa10.49□□□□□ -0.73
LRRC28-211ENST00000558890 TRPM3Q9HCF6 1732 aaPredicted RBP10.48□□□□□ -0.73
LRRC28-211ENST00000558890 ZNF692Q9BU19 519 aaPredicted RBP10.48□□□□□ -0.73
LRRC28-211ENST00000558890 TNS3Q68CZ2 1445 aa10.48□□□□□ -0.73
LRRC28-211ENST00000558890 COL22A1Q8NFW1 1626 aaPredicted RBP10.47□□□□□ -0.73
LRRC28-211ENST00000558890 ANKRD26Q9UPS8 1709 aa10.47□□□□□ -0.73
LRRC28-211ENST00000558890 CABLES1Q8TDN4 633 aa10.47□□□□□ -0.73
LRRC28-211ENST00000558890 NPC1L1Q9UHC9 1359 aa10.47□□□□□ -0.73
LRRC28-211ENST00000558890 NUTM2BA6NNL0 878 aaPredicted RBP10.46□□□□□ -0.73
LRRC28-211ENST00000558890 NUTM2EB1AL46 878 aaPredicted RBP10.46□□□□□ -0.73
LRRC28-211ENST00000558890 POTEAQ6S8J7 498 aa10.46□□□□□ -0.73
LRRC28-211ENST00000558890 ILDR2Q71H61 639 aa10.46□□□□□ -0.73
LRRC28-211ENST00000558890 NUTM2AQ8IVF1 878 aaPredicted RBP10.46□□□□□ -0.73
LRRC28-211ENST00000558890 FNBP4Q8N3X1 1017 aaPredicted RBP10.46□□□□□ -0.73
LRRC28-211ENST00000558890 TERF2IPQ9NYB0 399 aa10.46□□□□□ -0.73
LRRC28-211ENST00000558890 NSD2O96028 1365 aa10.46□□□□□ -0.74
LRRC28-211ENST00000558890 USP6P35125 1406 aa10.46□□□□□ -0.74
LRRC28-211ENST00000558890 EDC4Q6P2E9 1401 aaKnown RBP10.46□□□□□ -0.74
LRRC28-211ENST00000558890 KIF20BQ96Q89 1820 aa10.45□□□□□ -0.74
LRRC28-211ENST00000558890 ALS2Q96Q42 1657 aa10.45□□□□□ -0.74
LRRC28-211ENST00000558890 ARHGEF10O15013 1369 aa10.45□□□□□ -0.74
LRRC28-211ENST00000558890 TTC21BQ7Z4L5 1316 aa10.45□□□□□ -0.74
LRRC28-211ENST00000558890 KTN1Q86UP2 1357 aaKnown RBP10.44□□□□□ -0.74
LRRC28-211ENST00000558890 USP19O94966 1318 aa10.44□□□□□ -0.74
LRRC28-211ENST00000558890 FAM83GA6ND36 823 aa10.44□□□□□ -0.74
LRRC28-211ENST00000558890 A0A1W2PP64 1363 aa10.43□□□□□ -0.74
LRRC28-211ENST00000558890 TTC21AQ8NDW8 1320 aa10.43□□□□□ -0.74
LRRC28-211ENST00000558890 HDGFL2Q7Z4V5 671 aaPredicted RBP10.43□□□□□ -0.74
LRRC28-211ENST00000558890 CARD14Q9BXL6 1004 aa10.43□□□□□ -0.74
LRRC28-211ENST00000558890 BCL9LQ86UU0 1499 aa10.42□□□□□ -0.74
LRRC28-211ENST00000558890 PAK3O75914 559 aaPredicted RBP10.42□□□□□ -0.74
LRRC28-211ENST00000558890 ADAMTS2O95450 1211 aa10.42□□□□□ -0.74
LRRC28-211ENST00000558890 NUTM2GQ5VZR2 741 aa10.42□□□□□ -0.74
LRRC28-211ENST00000558890 ABTB2Q8N961 1025 aa10.42□□□□□ -0.74
LRRC28-211ENST00000558890 ZRANB1Q9UGI0 708 aa10.42□□□□□ -0.74
LRRC28-211ENST00000558890 USP31Q70CQ4 1352 aa10.41□□□□□ -0.74
LRRC28-211ENST00000558890 AFF2P51816 1311 aa10.41□□□□□ -0.74
LRRC28-211ENST00000558890 GCP02774 474 aa10.41□□□□□ -0.74
LRRC28-211ENST00000558890 TMC1Q8TDI8 760 aa10.41□□□□□ -0.74
LRRC28-211ENST00000558890 SLIT2O94813 1529 aa10.41□□□□□ -0.74
LRRC28-211ENST00000558890 PIK3C2AO00443 1686 aa10.41□□□□□ -0.74
LRRC28-211ENST00000558890 PHRF1Q9P1Y6 1649 aaKnown RBP10.4□□□□□ -0.74
LRRC28-211ENST00000558890 ABCC6O95255 1503 aa10.4□□□□□ -0.74
LRRC28-211ENST00000558890 SLC4A2P04920 1241 aa10.4□□□□□ -0.74
LRRC28-211ENST00000558890 NEFLP07196 543 aa10.4□□□□□ -0.74
LRRC28-211ENST00000558890 LMOD2Q6P5Q4 547 aa10.4□□□□□ -0.74
LRRC28-211ENST00000558890 C8orf37Q96NL8 207 aa10.4□□□□□ -0.74
LRRC28-211ENST00000558890 CRYBG1Q9Y4K1 1723 aa10.4□□□□□ -0.74
LRRC28-211ENST00000558890 CGNL1Q0VF96 1302 aa10.39□□□□□ -0.75
LRRC28-211ENST00000558890 MARF1Q9Y4F3 1742 aaKnown RBP10.39□□□□□ -0.75
LRRC28-211ENST00000558890 PER1O15534 1290 aaPredicted RBP10.39□□□□□ -0.75
LRRC28-211ENST00000558890 NLRP6P59044 892 aa10.39□□□□□ -0.75
LRRC28-211ENST00000558890 NLRP13Q86W25 1043 aa10.39□□□□□ -0.75
LRRC28-211ENST00000558890 NGLY1Q96IV0 654 aa10.39□□□□□ -0.75
LRRC28-211ENST00000558890 FOXD4L1Q9NU39 408 aa10.39□□□□□ -0.75
LRRC28-211ENST00000558890 SUPT16HQ9Y5B9 1047 aaKnown RBP10.39□□□□□ -0.75
LRRC28-211ENST00000558890 SLIT3O75094 1523 aa10.38□□□□□ -0.75
LRRC28-211ENST00000558890 FYB1O15117 783 aa10.38□□□□□ -0.75
LRRC28-211ENST00000558890 ZNF772Q68DY9 489 aaPredicted RBP10.38□□□□□ -0.75
LRRC28-211ENST00000558890 NME9Q86XW9 330 aa10.38□□□□□ -0.75
LRRC28-211ENST00000558890 QTRT2Q9H974 415 aaKnown RBP10.38□□□□□ -0.75
LRRC28-211ENST00000558890 OVOS2A0A0J9YW53 1432 aa10.38□□□□□ -0.75
LRRC28-211ENST00000558890 OVOS2Q6IE36 1432 aa10.38□□□□□ -0.75
LRRC28-211ENST00000558890 NSD3Q9BZ95 1437 aa10.38□□□□□ -0.75
LRRC28-211ENST00000558890 CPDO75976 1380 aa10.38□□□□□ -0.75
LRRC28-211ENST00000558890 ATRNO75882 1429 aa10.37□□□□□ -0.75
LRRC28-211ENST00000558890 MEX3CQ5U5Q3 659 aaKnown RBP10.37□□□□□ -0.75
LRRC28-211ENST00000558890 ARHGEF25Q86VW2 580 aa10.37□□□□□ -0.75
LRRC28-211ENST00000558890 UNC5CLQ8IV45 518 aa10.37□□□□□ -0.75
LRRC28-211ENST00000558890 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.37□□□□□ -0.75
LRRC28-211ENST00000558890 ABCA3Q99758 1704 aa10.37□□□□□ -0.75
LRRC28-211ENST00000558890 ZBTB22O15209 634 aa10.36□□□□□ -0.75
LRRC28-211ENST00000558890 ONECUT3O60422 494 aaPredicted RBP10.36□□□□□ -0.75
LRRC28-211ENST00000558890 ZC3H6P61129 1189 aaKnown RBP10.36□□□□□ -0.75
LRRC28-211ENST00000558890 PANK3Q9H999 370 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms