RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 BCL2L13Q9BXK5 485 aa13.9□□□□□ -0.18
PCAT29-201ENST00000558411 CARMIL2Q6F5E8 1435 aa13.89□□□□□ -0.19
PCAT29-201ENST00000558411 GTPBP4Q9BZE4 634 aaKnown RBP13.89□□□□□ -0.19
PCAT29-201ENST00000558411 RBSNQ9H1K0 784 aa13.89□□□□□ -0.19
PCAT29-201ENST00000558411 ATP10BO94823 1461 aa13.89□□□□□ -0.19
PCAT29-201ENST00000558411 ADGRB2O60241 1585 aa13.89□□□□□ -0.19
PCAT29-201ENST00000558411 ERVK-7P63135 1459 aa13.88□□□□□ -0.19
PCAT29-201ENST00000558411 A0A0U1RQG5 324 aaPredicted RBP13.88□□□□□ -0.19
PCAT29-201ENST00000558411 OSCARQ8IYS5 282 aa13.88□□□□□ -0.19
PCAT29-201ENST00000558411 ZSCAN20P17040 1043 aaPredicted RBP13.88□□□□□ -0.19
PCAT29-201ENST00000558411 GAS2L2Q8NHY3 880 aa13.88□□□□□ -0.19
PCAT29-201ENST00000558411 TNNT2P45379 298 aaPredicted RBP13.87□□□□□ -0.19
PCAT29-201ENST00000558411 CARD14Q9BXL6 1004 aa13.87□□□□□ -0.19
PCAT29-201ENST00000558411 LMBRD1Q9NUN5 540 aa13.87□□□□□ -0.19
PCAT29-201ENST00000558411 CD2BP2O95400 341 aaKnown RBP13.87□□□□□ -0.19
PCAT29-201ENST00000558411 CYP2E1P05181 493 aaPredicted RBP13.87□□□□□ -0.19
PCAT29-201ENST00000558411 TRPM2O94759 1503 aa13.87□□□□□ -0.19
PCAT29-201ENST00000558411 USP32Q8NFA0 1604 aa13.86□□□□□ -0.19
PCAT29-201ENST00000558411 KIF20AO95235 890 aa13.86□□□□□ -0.19
PCAT29-201ENST00000558411 CAVIN1Q6NZI2 390 aaKnown RBP13.86□□□□□ -0.19
PCAT29-201ENST00000558411 MYRIPQ8NFW9 859 aa13.86□□□□□ -0.19
PCAT29-201ENST00000558411 CLTCL1P53675 1640 aa13.86□□□□□ -0.19
PCAT29-201ENST00000558411 MYO3AQ8NEV4 1616 aa13.86□□□□□ -0.19
PCAT29-201ENST00000558411 TRIM27P14373 513 aa13.85□□□□□ -0.19
PCAT29-201ENST00000558411 NEUROD2Q15784 382 aa13.85□□□□□ -0.19
PCAT29-201ENST00000558411 CHD1LQ86WJ1 897 aa13.85□□□□□ -0.19
PCAT29-201ENST00000558411 PRIMPOLQ96LW4 560 aa13.85□□□□□ -0.19
PCAT29-201ENST00000558411 ZBTB40Q9NUA8 1239 aa13.85□□□□□ -0.19
PCAT29-201ENST00000558411 NEURL4Q96JN8 1562 aa13.85□□□□□ -0.19
PCAT29-201ENST00000558411 ATF7IPQ6VMQ6 1270 aa13.85□□□□□ -0.19
PCAT29-201ENST00000558411 RRP7AQ9Y3A4 280 aaKnown RBP13.85□□□□□ -0.19
PCAT29-201ENST00000558411 ZNF518AQ6AHZ1 1483 aa13.85□□□□□ -0.19
PCAT29-201ENST00000558411 SYCP2Q9BX26 1530 aa13.85□□□□□ -0.19
PCAT29-201ENST00000558411 PRIM1P49642 420 aaKnown RBP13.84□□□□□ -0.19
PCAT29-201ENST00000558411 MCTP1Q6DN14 999 aa13.84□□□□□ -0.19
PCAT29-201ENST00000558411 LRSAM1Q6UWE0 723 aa13.84□□□□□ -0.19
PCAT29-201ENST00000558411 ITPRIPQ8IWB1 547 aa13.84□□□□□ -0.19
PCAT29-201ENST00000558411 ZHX1Q9UKY1 873 aaPredicted RBP13.84□□□□□ -0.19
PCAT29-201ENST00000558411 GTF2F1P35269 517 aaKnown RBP eCLIP13.84□□□□□ -0.19
PCAT29-201ENST00000558411 HMGN5P82970 282 aaKnown RBP13.84□□□□□ -0.19
PCAT29-201ENST00000558411 CFAP44Q96MT7 982 aa13.84□□□□□ -0.19
PCAT29-201ENST00000558411 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.84□□□□□ -0.19
PCAT29-201ENST00000558411 CWC22Q9HCG8 908 aaKnown RBP13.84□□□□□ -0.19
PCAT29-201ENST00000558411 FOXD4L1Q9NU39 408 aa13.84□□□□□ -0.19
PCAT29-201ENST00000558411 SBNO2Q9Y2G9 1366 aa13.83□□□□□ -0.2
PCAT29-201ENST00000558411 LETM1O95202 739 aaPredicted RBP13.83□□□□□ -0.2
PCAT29-201ENST00000558411 RABEP1Q15276 862 aa13.83□□□□□ -0.2
PCAT29-201ENST00000558411 SMC4Q9NTJ3 1288 aa13.83□□□□□ -0.2
PCAT29-201ENST00000558411 YEATS2Q9ULM3 1422 aa13.83□□□□□ -0.2
PCAT29-201ENST00000558411 KIAA2012Q0VF49 1180 aa13.82□□□□□ -0.2
PCAT29-201ENST00000558411 PRDM10Q9NQV6 1147 aa13.82□□□□□ -0.2
PCAT29-201ENST00000558411 NOS1P29475 1434 aa13.82□□□□□ -0.2
PCAT29-201ENST00000558411 AK9Q5TCS8 1911 aa13.82□□□□□ -0.2
PCAT29-201ENST00000558411 ABCC11Q96J66 1382 aa13.81□□□□□ -0.2
PCAT29-201ENST00000558411 TBC1D9Q6ZT07 1266 aa13.81□□□□□ -0.2
PCAT29-201ENST00000558411 GCC1Q96CN9 775 aa13.81□□□□□ -0.2
PCAT29-201ENST00000558411 LNPKQ9C0E8 428 aa13.81□□□□□ -0.2
PCAT29-201ENST00000558411 PPRC1Q5VV67 1664 aaKnown RBP13.81□□□□□ -0.2
PCAT29-201ENST00000558411 MORC1Q86VD1 984 aa13.81□□□□□ -0.2
PCAT29-201ENST00000558411 CFAP53Q96M91 514 aa13.81□□□□□ -0.2
PCAT29-201ENST00000558411 IPO8O15397 1037 aaKnown RBP13.8□□□□□ -0.2
PCAT29-201ENST00000558411 PTPRTO14522 1441 aa13.8□□□□□ -0.2
PCAT29-201ENST00000558411 MED14O60244 1454 aa13.8□□□□□ -0.2
PCAT29-201ENST00000558411 TMEM57Q8N5G2 664 aa13.79□□□□□ -0.2
PCAT29-201ENST00000558411 GPT2Q8TD30 523 aa13.79□□□□□ -0.2
PCAT29-201ENST00000558411 SSH1Q8WYL5 1049 aa13.79□□□□□ -0.2
PCAT29-201ENST00000558411 RBM42Q9BTD8 480 aaKnown RBP13.79□□□□□ -0.2
PCAT29-201ENST00000558411 CHMP4BQ9H444 224 aaKnown RBP13.79□□□□□ -0.2
PCAT29-201ENST00000558411 IL16Q14005 1332 aa13.79□□□□□ -0.2
PCAT29-201ENST00000558411 MYOM2P54296 1465 aa13.79□□□□□ -0.2
PCAT29-201ENST00000558411 CDC45O75419 566 aa13.78□□□□□ -0.2
PCAT29-201ENST00000558411 MBD3O95983 291 aa13.78□□□□□ -0.2
PCAT29-201ENST00000558411 NSD3Q9BZ95 1437 aa13.78□□□□□ -0.2
PCAT29-201ENST00000558411 TAF3Q5VWG9 929 aa13.78□□□□□ -0.2
PCAT29-201ENST00000558411 MAP3K4Q9Y6R4 1608 aa13.77□□□□□ -0.2
PCAT29-201ENST00000558411 PPP4R3BQ5MIZ7 849 aa13.77□□□□□ -0.21
PCAT29-201ENST00000558411 INO80Q9ULG1 1556 aaPredicted RBP13.77□□□□□ -0.21
PCAT29-201ENST00000558411 NOB1Q9ULX3 412 aaKnown RBP13.77□□□□□ -0.21
PCAT29-201ENST00000558411 ABCA6Q8N139 1617 aa13.77□□□□□ -0.21
PCAT29-201ENST00000558411 EXOSC9Q06265 439 aaKnown RBP13.76□□□□□ -0.21
PCAT29-201ENST00000558411 ZNF710Q8N1W2 664 aa13.76□□□□□ -0.21
PCAT29-201ENST00000558411 ARID3AQ99856 593 aa13.76□□□□□ -0.21
PCAT29-201ENST00000558411 PRPF40AO75400 957 aaKnown RBP13.76□□□□□ -0.21
PCAT29-201ENST00000558411 PIBF1Q8WXW3 757 aa13.76□□□□□ -0.21
PCAT29-201ENST00000558411 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.76□□□□□ -0.21
PCAT29-201ENST00000558411 ARHGAP5Q13017 1502 aa13.76□□□□□ -0.21
PCAT29-201ENST00000558411 ALDH1L2Q3SY69 923 aa13.75□□□□□ -0.21
PCAT29-201ENST00000558411 TMEM63CQ9P1W3 806 aa13.75□□□□□ -0.21
PCAT29-201ENST00000558411 ZC3H13Q5T200 1668 aaKnown RBP13.75□□□□□ -0.21
PCAT29-201ENST00000558411 PTMAP06454 111 aaKnown RBP13.75□□□□□ -0.21
PCAT29-201ENST00000558411 RBM27Q9P2N5 1060 aaKnown RBP13.75□□□□□ -0.21
PCAT29-201ENST00000558411 PPIP5K1Q6PFW1 1433 aa13.74□□□□□ -0.21
PCAT29-201ENST00000558411 SYCE3A1L190 88 aa13.74□□□□□ -0.21
PCAT29-201ENST00000558411 BRPF1P55201 1214 aaPredicted RBP13.74□□□□□ -0.21
PCAT29-201ENST00000558411 ANKRD45Q5TZF3 282 aa13.74□□□□□ -0.21
PCAT29-201ENST00000558411 NSD2O96028 1365 aa13.74□□□□□ -0.21
PCAT29-201ENST00000558411 MTHFSP49914 203 aa13.73□□□□□ -0.21
PCAT29-201ENST00000558411 UVSSAQ2YD98 709 aa13.73□□□□□ -0.21
PCAT29-201ENST00000558411 DNTTIP2Q5QJE6 756 aaKnown RBP13.73□□□□□ -0.21
PCAT29-201ENST00000558411 TSR2Q969E8 191 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms