RNA–Protein interactions for RNA: ENST00000556166.2

GABRB3-210, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-210ENST00000556166 ZRANB1Q9UGI0 708 aa15.83■□□□□ 0.13
GABRB3-210ENST00000556166 SBNO1A3KN83 1393 aa15.83■□□□□ 0.12
GABRB3-210ENST00000556166 NHSL1Q5SYE7 1610 aa15.83■□□□□ 0.12
GABRB3-210ENST00000556166 LRRC59Q96AG4 307 aaKnown RBP15.83■□□□□ 0.12
GABRB3-210ENST00000556166 NUTM2GQ5VZR2 741 aa15.81■□□□□ 0.12
GABRB3-210ENST00000556166 NME9Q86XW9 330 aa15.81■□□□□ 0.12
GABRB3-210ENST00000556166 EDC4Q6P2E9 1401 aaKnown RBP15.8■□□□□ 0.12
GABRB3-210ENST00000556166 COL16A1Q07092 1604 aaPredicted RBP15.8■□□□□ 0.12
GABRB3-210ENST00000556166 FYB1O15117 783 aa15.8■□□□□ 0.12
GABRB3-210ENST00000556166 NSD3Q9BZ95 1437 aa15.8■□□□□ 0.12
GABRB3-210ENST00000556166 LMOD2Q6P5Q4 547 aa15.79■□□□□ 0.12
GABRB3-210ENST00000556166 ILDR1Q86SU0 546 aaPredicted RBP15.79■□□□□ 0.12
GABRB3-210ENST00000556166 ABTB2Q8N961 1025 aa15.79■□□□□ 0.12
GABRB3-210ENST00000556166 BRD4O60885 1362 aaPredicted RBP15.79■□□□□ 0.12
GABRB3-210ENST00000556166 AKAP12Q02952 1782 aa15.79■□□□□ 0.12
GABRB3-210ENST00000556166 PHLPP1O60346 1717 aa15.78■□□□□ 0.12
GABRB3-210ENST00000556166 TRPM3Q9HCF6 1732 aaPredicted RBP15.78■□□□□ 0.12
GABRB3-210ENST00000556166 TNS3Q68CZ2 1445 aa15.78■□□□□ 0.12
GABRB3-210ENST00000556166 TTC21AQ8NDW8 1320 aa15.78■□□□□ 0.12
GABRB3-210ENST00000556166 AMER1Q5JTC6 1135 aaPredicted RBP15.78■□□□□ 0.12
GABRB3-210ENST00000556166 PNPLA6Q8IY17 1366 aa15.77■□□□□ 0.12
GABRB3-210ENST00000556166 PLEKHG5O94827 1062 aa15.77■□□□□ 0.11
GABRB3-210ENST00000556166 CABLES1Q8TDN4 633 aa15.77■□□□□ 0.11
GABRB3-210ENST00000556166 NLRP6P59044 892 aa15.76■□□□□ 0.11
GABRB3-210ENST00000556166 GGNBP2Q9H3C7 697 aa15.76■□□□□ 0.11
GABRB3-210ENST00000556166 KNSTRNQ9Y448 316 aa15.76■□□□□ 0.11
GABRB3-210ENST00000556166 MON2Q7Z3U7 1717 aa15.76■□□□□ 0.11
GABRB3-210ENST00000556166 NRKQ7Z2Y5 1582 aa15.75■□□□□ 0.11
GABRB3-210ENST00000556166 USP31Q70CQ4 1352 aa15.75■□□□□ 0.11
GABRB3-210ENST00000556166 ARHGEF10O15013 1369 aa15.74■□□□□ 0.11
GABRB3-210ENST00000556166 JCADQ9P266 1359 aa15.74■□□□□ 0.11
GABRB3-210ENST00000556166 CGNL1Q0VF96 1302 aa15.74■□□□□ 0.11
GABRB3-210ENST00000556166 ALS2Q96Q42 1657 aa15.73■□□□□ 0.11
GABRB3-210ENST00000556166 NLRP13Q86W25 1043 aa15.73■□□□□ 0.11
GABRB3-210ENST00000556166 USP19O94966 1318 aa15.73■□□□□ 0.11
GABRB3-210ENST00000556166 FBLN1P23142 703 aa15.72■□□□□ 0.11
GABRB3-210ENST00000556166 PIK3C2AO00443 1686 aa15.71■□□□□ 0.11
GABRB3-210ENST00000556166 MED1Q15648 1581 aaPredicted RBP15.71■□□□□ 0.11
GABRB3-210ENST00000556166 NUTM2BA6NNL0 878 aaPredicted RBP15.7■□□□□ 0.1
GABRB3-210ENST00000556166 NUTM2EB1AL46 878 aaPredicted RBP15.7■□□□□ 0.1
GABRB3-210ENST00000556166 GCP02774 474 aa15.7■□□□□ 0.1
GABRB3-210ENST00000556166 CNGB1Q14028 1251 aaPredicted RBP15.7■□□□□ 0.1
GABRB3-210ENST00000556166 CC2D1BQ5T0F9 858 aaKnown RBP15.7■□□□□ 0.1
GABRB3-210ENST00000556166 NUTM2AQ8IVF1 878 aaPredicted RBP15.7■□□□□ 0.1
GABRB3-210ENST00000556166 OVOS2A0A0J9YW53 1432 aa15.7■□□□□ 0.1
GABRB3-210ENST00000556166 OVOS2Q6IE36 1432 aa15.7■□□□□ 0.1
GABRB3-210ENST00000556166 COG3Q96JB2 828 aa15.7■□□□□ 0.1
GABRB3-210ENST00000556166 NPC1L1Q9UHC9 1359 aa15.68■□□□□ 0.1
GABRB3-210ENST00000556166 SOX12O15370 315 aa15.68■□□□□ 0.1
GABRB3-210ENST00000556166 SPATA31A6Q5VVP1 1343 aa15.67■□□□□ 0.1
GABRB3-210ENST00000556166 COL22A1Q8NFW1 1626 aaPredicted RBP15.67■□□□□ 0.1
GABRB3-210ENST00000556166 TNNT2P45379 298 aaPredicted RBP15.66■□□□□ 0.1
GABRB3-210ENST00000556166 ZC3H6P61129 1189 aaKnown RBP15.66■□□□□ 0.1
GABRB3-210ENST00000556166 MORC1Q86VD1 984 aa15.66■□□□□ 0.1
GABRB3-210ENST00000556166 MARF1Q9Y4F3 1742 aaKnown RBP15.66■□□□□ 0.1
GABRB3-210ENST00000556166 NSD2O96028 1365 aa15.66■□□□□ 0.1
GABRB3-210ENST00000556166 FAM83GA6ND36 823 aa15.66■□□□□ 0.1
GABRB3-210ENST00000556166 ADAMTS2O95450 1211 aa15.66■□□□□ 0.1
GABRB3-210ENST00000556166 SLIT3O75094 1523 aa15.65■□□□□ 0.1
GABRB3-210ENST00000556166 SHPRHQ149N8 1683 aa15.65■□□□□ 0.1
GABRB3-210ENST00000556166 LRP6O75581 1613 aa15.65■□□□□ 0.1
GABRB3-210ENST00000556166 HAP1P54257 671 aaPredicted RBP15.64■□□□□ 0.09
GABRB3-210ENST00000556166 ARHGEF25Q86VW2 580 aa15.64■□□□□ 0.09
GABRB3-210ENST00000556166 KCNH5Q8NCM2 988 aa15.64■□□□□ 0.09
GABRB3-210ENST00000556166 RRS1Q15050 365 aaKnown RBP15.63■□□□□ 0.09
GABRB3-210ENST00000556166 CHRNA2Q15822 529 aa15.63■□□□□ 0.09
GABRB3-210ENST00000556166 KIAA0232Q92628 1395 aa15.63■□□□□ 0.09
GABRB3-210ENST00000556166 NFAT5O94916 1531 aa15.63■□□□□ 0.09
GABRB3-210ENST00000556166 CRYBG1Q9Y4K1 1723 aa15.62■□□□□ 0.09
GABRB3-210ENST00000556166 USP54Q70EL1 1684 aa15.62■□□□□ 0.09
GABRB3-210ENST00000556166 MAP3K19Q56UN5 1328 aa15.62■□□□□ 0.09
GABRB3-210ENST00000556166 POLKQ9UBT6 870 aa15.62■□□□□ 0.09
GABRB3-210ENST00000556166 CPDO75976 1380 aa15.61■□□□□ 0.09
GABRB3-210ENST00000556166 AXIN2Q9Y2T1 843 aa15.61■□□□□ 0.09
GABRB3-210ENST00000556166 EMILIN1Q9Y6C2 1016 aa15.61■□□□□ 0.09
GABRB3-210ENST00000556166 KIF20BQ96Q89 1820 aa15.6■□□□□ 0.09
GABRB3-210ENST00000556166 ZBTB7CA1YPR0 619 aa15.6■□□□□ 0.09
GABRB3-210ENST00000556166 PRDM11Q9NQV5 511 aa15.6■□□□□ 0.09
GABRB3-210ENST00000556166 AATKQ6ZMQ8 1374 aa15.6■□□□□ 0.09
GABRB3-210ENST00000556166 PARD3Q8TEW0 1356 aa15.6■□□□□ 0.09
GABRB3-210ENST00000556166 PHRF1Q9P1Y6 1649 aaKnown RBP15.59■□□□□ 0.09
GABRB3-210ENST00000556166 ABCA3Q99758 1704 aa15.59■□□□□ 0.09
GABRB3-210ENST00000556166 C8orf37Q96NL8 207 aa15.58■□□□□ 0.09
GABRB3-210ENST00000556166 PRKRIP1Q9H875 184 aaPredicted RBP15.58■□□□□ 0.09
GABRB3-210ENST00000556166 PPP2R1AP30153 589 aa15.58■□□□□ 0.08
GABRB3-210ENST00000556166 MTHFSP49914 203 aa15.57■□□□□ 0.08
GABRB3-210ENST00000556166 RALBP1Q15311 655 aa15.57■□□□□ 0.08
GABRB3-210ENST00000556166 MEX3CQ5U5Q3 659 aaKnown RBP15.57■□□□□ 0.08
GABRB3-210ENST00000556166 IP6K1Q92551 441 aa15.57■□□□□ 0.08
GABRB3-210ENST00000556166 NGLY1Q96IV0 654 aa15.57■□□□□ 0.08
GABRB3-210ENST00000556166 PPM1GO15355 546 aaPredicted RBP15.56■□□□□ 0.08
GABRB3-210ENST00000556166 HOXC9P31274 260 aa15.56■□□□□ 0.08
GABRB3-210ENST00000556166 HSP90AB2PQ58FF8 381 aa15.56■□□□□ 0.08
GABRB3-210ENST00000556166 FNBP4Q8N3X1 1017 aaPredicted RBP15.56■□□□□ 0.08
GABRB3-210ENST00000556166 AMPHP49418 695 aa15.55■□□□□ 0.08
GABRB3-210ENST00000556166 DIEXFQ68CQ4 756 aaKnown RBP15.55■□□□□ 0.08
GABRB3-210ENST00000556166 BTG4Q9NY30 223 aa15.55■□□□□ 0.08
GABRB3-210ENST00000556166 ANKRD26Q9UPS8 1709 aa15.55■□□□□ 0.08
GABRB3-210ENST00000556166 CAMTA1Q9Y6Y1 1673 aa15.53■□□□□ 0.08
GABRB3-210ENST00000556166 RGS17Q9UGC6 210 aaPredicted RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms