RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 DDX17Q92841 729 aaKnown RBP10.51□□□□□ -0.73
TDP1-214ENST00000556063 AKAP12Q02952 1782 aa10.5□□□□□ -0.73
TDP1-214ENST00000556063 TTC21AQ8NDW8 1320 aa10.5□□□□□ -0.73
TDP1-214ENST00000556063 A0A1W2PP64 1363 aa10.5□□□□□ -0.73
TDP1-214ENST00000556063 ARHGEF10O15013 1369 aa10.5□□□□□ -0.73
TDP1-214ENST00000556063 PXDNQ92626 1479 aa10.49□□□□□ -0.73
TDP1-214ENST00000556063 PANK3Q9H999 370 aa10.49□□□□□ -0.73
TDP1-214ENST00000556063 SPATA31A3Q5VYP0 1347 aa10.49□□□□□ -0.73
TDP1-214ENST00000556063 JCADQ9P266 1359 aa10.49□□□□□ -0.73
TDP1-214ENST00000556063 EDC4Q6P2E9 1401 aaKnown RBP10.49□□□□□ -0.73
TDP1-214ENST00000556063 NLRP13Q86W25 1043 aa10.48□□□□□ -0.73
TDP1-214ENST00000556063 ABTB2Q8N961 1025 aa10.48□□□□□ -0.73
TDP1-214ENST00000556063 KNSTRNQ9Y448 316 aa10.48□□□□□ -0.73
TDP1-214ENST00000556063 TTC21BQ7Z4L5 1316 aa10.48□□□□□ -0.73
TDP1-214ENST00000556063 TNS3Q68CZ2 1445 aa10.48□□□□□ -0.73
TDP1-214ENST00000556063 CD163L1Q9NR16 1453 aa10.48□□□□□ -0.73
TDP1-214ENST00000556063 COL16A1Q07092 1604 aaPredicted RBP10.47□□□□□ -0.73
TDP1-214ENST00000556063 MYOM1P52179 1685 aa10.47□□□□□ -0.73
TDP1-214ENST00000556063 MON2Q7Z3U7 1717 aa10.47□□□□□ -0.73
TDP1-214ENST00000556063 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.47□□□□□ -0.73
TDP1-214ENST00000556063 CGNL1Q0VF96 1302 aa10.47□□□□□ -0.73
TDP1-214ENST00000556063 HAP1P54257 671 aaPredicted RBP10.46□□□□□ -0.73
TDP1-214ENST00000556063 NLRP6P59044 892 aa10.46□□□□□ -0.73
TDP1-214ENST00000556063 SSH2Q76I76 1423 aa10.46□□□□□ -0.74
TDP1-214ENST00000556063 TRPM3Q9HCF6 1732 aaPredicted RBP10.45□□□□□ -0.74
TDP1-214ENST00000556063 NSD3Q9BZ95 1437 aa10.45□□□□□ -0.74
TDP1-214ENST00000556063 PNPLA6Q8IY17 1366 aa10.45□□□□□ -0.74
TDP1-214ENST00000556063 SPATA31A6Q5VVP1 1343 aa10.45□□□□□ -0.74
TDP1-214ENST00000556063 ILDR1Q86SU0 546 aaPredicted RBP10.45□□□□□ -0.74
TDP1-214ENST00000556063 CARD14Q9BXL6 1004 aa10.45□□□□□ -0.74
TDP1-214ENST00000556063 DDX10Q13206 875 aaKnown RBP10.44□□□□□ -0.74
TDP1-214ENST00000556063 COG3Q96JB2 828 aa10.44□□□□□ -0.74
TDP1-214ENST00000556063 NSD2O96028 1365 aa10.43□□□□□ -0.74
TDP1-214ENST00000556063 NUTM2GQ5VZR2 741 aa10.43□□□□□ -0.74
TDP1-214ENST00000556063 NME9Q86XW9 330 aa10.43□□□□□ -0.74
TDP1-214ENST00000556063 KCNH5Q8NCM2 988 aa10.43□□□□□ -0.74
TDP1-214ENST00000556063 SHPRHQ149N8 1683 aa10.43□□□□□ -0.74
TDP1-214ENST00000556063 ALS2Q96Q42 1657 aa10.43□□□□□ -0.74
TDP1-214ENST00000556063 NRKQ7Z2Y5 1582 aa10.43□□□□□ -0.74
TDP1-214ENST00000556063 USP31Q70CQ4 1352 aa10.42□□□□□ -0.74
TDP1-214ENST00000556063 FYB1O15117 783 aa10.42□□□□□ -0.74
TDP1-214ENST00000556063 COL22A1Q8NFW1 1626 aaPredicted RBP10.41□□□□□ -0.74
TDP1-214ENST00000556063 NUTM2BA6NNL0 878 aaPredicted RBP10.41□□□□□ -0.74
TDP1-214ENST00000556063 NUTM2EB1AL46 878 aaPredicted RBP10.41□□□□□ -0.74
TDP1-214ENST00000556063 PER1O15534 1290 aaPredicted RBP10.41□□□□□ -0.74
TDP1-214ENST00000556063 PLEKHG5O94827 1062 aa10.41□□□□□ -0.74
TDP1-214ENST00000556063 NUTM2AQ8IVF1 878 aaPredicted RBP10.41□□□□□ -0.74
TDP1-214ENST00000556063 GGNBP2Q9H3C7 697 aa10.41□□□□□ -0.74
TDP1-214ENST00000556063 NPC1L1Q9UHC9 1359 aa10.4□□□□□ -0.74
TDP1-214ENST00000556063 KIF20BQ96Q89 1820 aa10.4□□□□□ -0.74
TDP1-214ENST00000556063 MED1Q15648 1581 aaPredicted RBP10.4□□□□□ -0.74
TDP1-214ENST00000556063 USP19O94966 1318 aa10.4□□□□□ -0.74
TDP1-214ENST00000556063 GCP02774 474 aa10.4□□□□□ -0.74
TDP1-214ENST00000556063 MEX3CQ5U5Q3 659 aaKnown RBP10.4□□□□□ -0.74
TDP1-214ENST00000556063 CABLES1Q8TDN4 633 aa10.4□□□□□ -0.74
TDP1-214ENST00000556063 PIK3C2AO00443 1686 aa10.4□□□□□ -0.74
TDP1-214ENST00000556063 AMER1Q5JTC6 1135 aaPredicted RBP10.39□□□□□ -0.75
TDP1-214ENST00000556063 MORC1Q86VD1 984 aa10.39□□□□□ -0.75
TDP1-214ENST00000556063 OVOS2A0A0J9YW53 1432 aa10.39□□□□□ -0.75
TDP1-214ENST00000556063 OVOS2Q6IE36 1432 aa10.39□□□□□ -0.75
TDP1-214ENST00000556063 ADAMTS2O95450 1211 aa10.38□□□□□ -0.75
TDP1-214ENST00000556063 PRDM11Q9NQV5 511 aa10.38□□□□□ -0.75
TDP1-214ENST00000556063 ZRANB1Q9UGI0 708 aa10.38□□□□□ -0.75
TDP1-214ENST00000556063 USP54Q70EL1 1684 aa10.38□□□□□ -0.75
TDP1-214ENST00000556063 SOX12O15370 315 aa10.37□□□□□ -0.75
TDP1-214ENST00000556063 ZC3H6P61129 1189 aaKnown RBP10.37□□□□□ -0.75
TDP1-214ENST00000556063 CC2D1BQ5T0F9 858 aaKnown RBP10.37□□□□□ -0.75
TDP1-214ENST00000556063 RNF39Q9H2S5 420 aa10.37□□□□□ -0.75
TDP1-214ENST00000556063 SLIT3O75094 1523 aa10.37□□□□□ -0.75
TDP1-214ENST00000556063 NGLY1Q96IV0 654 aa10.36□□□□□ -0.75
TDP1-214ENST00000556063 CPDO75976 1380 aa10.36□□□□□ -0.75
TDP1-214ENST00000556063 ANKRD26Q9UPS8 1709 aa10.36□□□□□ -0.75
TDP1-214ENST00000556063 ZBTB7CA1YPR0 619 aa10.35□□□□□ -0.75
TDP1-214ENST00000556063 DCAF8L1A6NGE4 600 aa10.35□□□□□ -0.75
TDP1-214ENST00000556063 CNGB1Q14028 1251 aaPredicted RBP10.35□□□□□ -0.75
TDP1-214ENST00000556063 POTEHQ6S545 545 aa10.35□□□□□ -0.75
TDP1-214ENST00000556063 PHRF1Q9P1Y6 1649 aaKnown RBP10.35□□□□□ -0.75
TDP1-214ENST00000556063 ABCA3Q99758 1704 aa10.35□□□□□ -0.75
TDP1-214ENST00000556063 CRYBG1Q9Y4K1 1723 aa10.34□□□□□ -0.75
TDP1-214ENST00000556063 TNNT2P45379 298 aaPredicted RBP10.34□□□□□ -0.75
TDP1-214ENST00000556063 AMPHP49418 695 aa10.34□□□□□ -0.75
TDP1-214ENST00000556063 RALBP1Q15311 655 aa10.34□□□□□ -0.75
TDP1-214ENST00000556063 ARHGEF25Q86VW2 580 aa10.34□□□□□ -0.75
TDP1-214ENST00000556063 C8orf37Q96NL8 207 aa10.34□□□□□ -0.75
TDP1-214ENST00000556063 AATKQ6ZMQ8 1374 aa10.34□□□□□ -0.75
TDP1-214ENST00000556063 KIAA0232Q92628 1395 aa10.34□□□□□ -0.75
TDP1-214ENST00000556063 MARF1Q9Y4F3 1742 aaKnown RBP10.33□□□□□ -0.76
TDP1-214ENST00000556063 KIF24Q5T7B8 1368 aa10.33□□□□□ -0.76
TDP1-214ENST00000556063 LRP6O75581 1613 aa10.33□□□□□ -0.76
TDP1-214ENST00000556063 NFAT5O94916 1531 aa10.33□□□□□ -0.76
TDP1-214ENST00000556063 MAP3K19Q56UN5 1328 aa10.33□□□□□ -0.76
TDP1-214ENST00000556063 FAM83GA6ND36 823 aa10.32□□□□□ -0.76
TDP1-214ENST00000556063 PPM1GO15355 546 aaPredicted RBP10.32□□□□□ -0.76
TDP1-214ENST00000556063 ANP32CO43423 234 aa10.32□□□□□ -0.76
TDP1-214ENST00000556063 EVA1CP58658 441 aa10.32□□□□□ -0.76
TDP1-214ENST00000556063 CHRNA2Q15822 529 aa10.32□□□□□ -0.76
TDP1-214ENST00000556063 MAP2P11137 1827 aaKnown RBP10.32□□□□□ -0.76
TDP1-214ENST00000556063 COL14A1Q05707 1796 aaKnown RBP10.31□□□□□ -0.76
TDP1-214ENST00000556063 RTL1A6NKG5 1358 aa10.31□□□□□ -0.76
TDP1-214ENST00000556063 RRS1Q15050 365 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms