RNA–Protein interactions for RNA: ENST00000556005.1

EFCAB11-209, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 1,856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-209ENST00000556005 PNPLA6Q8IY17 1366 aa13.23□□□□□ -0.29
EFCAB11-209ENST00000556005 PIK3R4Q99570 1358 aa13.23□□□□□ -0.29
EFCAB11-209ENST00000556005 DIAPH1O60610 1272 aaKnown RBP13.23□□□□□ -0.29
EFCAB11-209ENST00000556005 ANKLE2Q86XL3 938 aa13.23□□□□□ -0.29
EFCAB11-209ENST00000556005 NCKAP5LQ9HCH0 1330 aa13.22□□□□□ -0.29
EFCAB11-209ENST00000556005 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.22□□□□□ -0.29
EFCAB11-209ENST00000556005 PLEKHG3A1L390 1219 aa13.22□□□□□ -0.29
EFCAB11-209ENST00000556005 CCDC27Q2M243 656 aa13.22□□□□□ -0.29
EFCAB11-209ENST00000556005 COG3Q96JB2 828 aa13.22□□□□□ -0.29
EFCAB11-209ENST00000556005 PNNQ9H307 717 aaKnown RBP13.22□□□□□ -0.29
EFCAB11-209ENST00000556005 U2SURPO15042 1029 aaKnown RBP13.21□□□□□ -0.29
EFCAB11-209ENST00000556005 CCDC136Q96JN2 1154 aa13.21□□□□□ -0.29
EFCAB11-209ENST00000556005 ADAMTSL3P82987 1691 aa13.21□□□□□ -0.29
EFCAB11-209ENST00000556005 NEUROD2Q15784 382 aa13.21□□□□□ -0.3
EFCAB11-209ENST00000556005 NME9Q86XW9 330 aa13.21□□□□□ -0.3
EFCAB11-209ENST00000556005 WDR63Q8IWG1 891 aa13.21□□□□□ -0.3
EFCAB11-209ENST00000556005 TSHZ2Q9NRE2 1034 aa13.21□□□□□ -0.3
EFCAB11-209ENST00000556005 POLKQ9UBT6 870 aa13.21□□□□□ -0.3
EFCAB11-209ENST00000556005 COL3A1P02461 1466 aaPredicted RBP13.2□□□□□ -0.3
EFCAB11-209ENST00000556005 MSH5O43196 834 aa13.2□□□□□ -0.3
EFCAB11-209ENST00000556005 SPINK5Q9NQ38 1064 aaPredicted RBP13.2□□□□□ -0.3
EFCAB11-209ENST00000556005 NKTRP30414 1462 aaKnown RBP13.2□□□□□ -0.3
EFCAB11-209ENST00000556005 IQSEC2Q5JU85 1478 aa13.2□□□□□ -0.3
EFCAB11-209ENST00000556005 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.19□□□□□ -0.3
EFCAB11-209ENST00000556005 ACEP12821 1306 aa13.19□□□□□ -0.3
EFCAB11-209ENST00000556005 AATKQ6ZMQ8 1374 aa13.19□□□□□ -0.3
EFCAB11-209ENST00000556005 PPM1GO15355 546 aaPredicted RBP13.19□□□□□ -0.3
EFCAB11-209ENST00000556005 RRP7AQ9Y3A4 280 aaKnown RBP13.19□□□□□ -0.3
EFCAB11-209ENST00000556005 MON2Q7Z3U7 1717 aa13.18□□□□□ -0.3
EFCAB11-209ENST00000556005 NUTM2FA1L443 756 aa13.18□□□□□ -0.3
EFCAB11-209ENST00000556005 PIAS4Q8N2W9 510 aaPredicted RBP13.18□□□□□ -0.3
EFCAB11-209ENST00000556005 PLEKHF1Q96S99 279 aa13.18□□□□□ -0.3
EFCAB11-209ENST00000556005 SETD1BQ9UPS6 1966 aaKnown RBP13.18□□□□□ -0.3
EFCAB11-209ENST00000556005 MAPK8IP3Q9UPT6 1336 aa13.18□□□□□ -0.3
EFCAB11-209ENST00000556005 AKAP12Q02952 1782 aa13.17□□□□□ -0.3
EFCAB11-209ENST00000556005 ITSN1Q15811 1721 aa13.17□□□□□ -0.3
EFCAB11-209ENST00000556005 FCHSD2O94868 740 aa13.17□□□□□ -0.3
EFCAB11-209ENST00000556005 KCNA6P17658 529 aa13.17□□□□□ -0.3
EFCAB11-209ENST00000556005 ADRA2BP18089 450 aa13.17□□□□□ -0.3
EFCAB11-209ENST00000556005 EXOC6Q8TAG9 804 aa13.17□□□□□ -0.3
EFCAB11-209ENST00000556005 TTC21BQ7Z4L5 1316 aa13.17□□□□□ -0.3
EFCAB11-209ENST00000556005 PLIN1O60240 522 aa13.16□□□□□ -0.3
EFCAB11-209ENST00000556005 DMRT2Q9Y5R5 561 aa13.16□□□□□ -0.3
EFCAB11-209ENST00000556005 ZNF142P52746 1687 aaPredicted RBP13.16□□□□□ -0.3
EFCAB11-209ENST00000556005 XRN1Q8IZH2 1706 aaKnown RBP13.16□□□□□ -0.3
EFCAB11-209ENST00000556005 ZRANB1Q9UGI0 708 aa13.16□□□□□ -0.3
EFCAB11-209ENST00000556005 TOPAZ1Q8N9V7 1692 aa13.15□□□□□ -0.3
EFCAB11-209ENST00000556005 NEFMP07197 916 aa13.15□□□□□ -0.3
EFCAB11-209ENST00000556005 FBLN1P23142 703 aa13.15□□□□□ -0.3
EFCAB11-209ENST00000556005 USP6P35125 1406 aa13.15□□□□□ -0.3
EFCAB11-209ENST00000556005 TMPOP42166 694 aaKnown RBP13.14□□□□□ -0.31
EFCAB11-209ENST00000556005 EMILIN1Q9Y6C2 1016 aa13.14□□□□□ -0.31
EFCAB11-209ENST00000556005 MYH16Q9H6N6 1097 aa13.14□□□□□ -0.31
EFCAB11-209ENST00000556005 MAP2P11137 1827 aaKnown RBP13.14□□□□□ -0.31
EFCAB11-209ENST00000556005 TTC21AQ8NDW8 1320 aa13.13□□□□□ -0.31
EFCAB11-209ENST00000556005 CDK12Q9NYV4 1490 aaPredicted RBP13.13□□□□□ -0.31
EFCAB11-209ENST00000556005 NGDNQ8NEJ9 315 aaKnown RBP13.13□□□□□ -0.31
EFCAB11-209ENST00000556005 ANKARQ7Z5J8 1434 aa13.13□□□□□ -0.31
EFCAB11-209ENST00000556005 IL13P35225 146 aa13.12□□□□□ -0.31
EFCAB11-209ENST00000556005 PMFBP1Q8TBY8 1022 aa13.12□□□□□ -0.31
EFCAB11-209ENST00000556005 RRS1Q15050 365 aaKnown RBP13.12□□□□□ -0.31
EFCAB11-209ENST00000556005 SSH2Q76I76 1423 aa13.11□□□□□ -0.31
EFCAB11-209ENST00000556005 RIPK4P57078 832 aa13.11□□□□□ -0.31
EFCAB11-209ENST00000556005 CRBNQ96SW2 442 aa13.11□□□□□ -0.31
EFCAB11-209ENST00000556005 RSPH6AQ9H0K4 717 aa13.11□□□□□ -0.31
EFCAB11-209ENST00000556005 NRKQ7Z2Y5 1582 aa13.11□□□□□ -0.31
EFCAB11-209ENST00000556005 OVOS2A0A0J9YW53 1432 aa13.1□□□□□ -0.31
EFCAB11-209ENST00000556005 OVOS2Q6IE36 1432 aa13.1□□□□□ -0.31
EFCAB11-209ENST00000556005 BCAR3O75815 825 aa13.1□□□□□ -0.31
EFCAB11-209ENST00000556005 PRKAR2BP31323 418 aa13.1□□□□□ -0.31
EFCAB11-209ENST00000556005 TRIM35Q9UPQ4 493 aa13.1□□□□□ -0.31
EFCAB11-209ENST00000556005 IL16Q14005 1332 aa13.09□□□□□ -0.31
EFCAB11-209ENST00000556005 NPHP4O75161 1426 aaPredicted RBP13.09□□□□□ -0.31
EFCAB11-209ENST00000556005 USP31Q70CQ4 1352 aa13.09□□□□□ -0.31
EFCAB11-209ENST00000556005 C20orf194Q5TEA3 1177 aa13.09□□□□□ -0.31
EFCAB11-209ENST00000556005 CHD2O14647 1828 aaKnown RBP13.09□□□□□ -0.31
EFCAB11-209ENST00000556005 CT47B1P0C2W7 299 aaPredicted RBP13.08□□□□□ -0.32
EFCAB11-209ENST00000556005 HMOX1P09601 288 aa13.08□□□□□ -0.32
EFCAB11-209ENST00000556005 LRRC7Q96NW7 1537 aa13.06□□□□□ -0.32
EFCAB11-209ENST00000556005 RARSP54136 660 aaKnown RBP13.06□□□□□ -0.32
EFCAB11-209ENST00000556005 PDE3AQ14432 1141 aa13.06□□□□□ -0.32
EFCAB11-209ENST00000556005 CANXP27824 592 aaKnown RBP13.06□□□□□ -0.32
EFCAB11-209ENST00000556005 NFE2L2Q16236 605 aa13.06□□□□□ -0.32
EFCAB11-209ENST00000556005 RBM19Q9Y4C8 960 aaKnown RBP13.06□□□□□ -0.32
EFCAB11-209ENST00000556005 FMN2Q9NZ56 1722 aa13.05□□□□□ -0.32
EFCAB11-209ENST00000556005 RGPD8O14715 1765 aaPredicted RBP13.05□□□□□ -0.32
EFCAB11-209ENST00000556005 CALD1Q05682 793 aaKnown RBP13.05□□□□□ -0.32
EFCAB11-209ENST00000556005 FANCIQ9NVI1 1328 aa13.05□□□□□ -0.32
EFCAB11-209ENST00000556005 EIF4A2Q14240 407 aaKnown RBP13.04□□□□□ -0.32
EFCAB11-209ENST00000556005 PHACTR3Q96KR7 559 aa13.04□□□□□ -0.32
EFCAB11-209ENST00000556005 PHF8Q9UPP1 1060 aa13.04□□□□□ -0.32
EFCAB11-209ENST00000556005 NLRP6P59044 892 aa13.04□□□□□ -0.32
EFCAB11-209ENST00000556005 LMOD3Q0VAK6 560 aa13.04□□□□□ -0.32
EFCAB11-209ENST00000556005 NALCNQ8IZF0 1738 aa13.03□□□□□ -0.32
EFCAB11-209ENST00000556005 ADGRL3Q9HAR2 1447 aa13.03□□□□□ -0.32
EFCAB11-209ENST00000556005 C14orf37Q86TY3 774 aa13.03□□□□□ -0.32
EFCAB11-209ENST00000556005 TSR2Q969E8 191 aaKnown RBP13.03□□□□□ -0.32
EFCAB11-209ENST00000556005 SOX12O15370 315 aa13.02□□□□□ -0.32
EFCAB11-209ENST00000556005 HSP90AB2PQ58FF8 381 aa13.02□□□□□ -0.32
EFCAB11-209ENST00000556005 FRAT1Q92837 279 aaPredicted RBP13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms