RNA–Protein interactions for RNA: ENST00000554447.5

CIPC-202, Transcript of CLOCK interacting pacemaker, humanhuman

TSL 4

Gene CIPC, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIPC-202ENST00000554447 KIF1AQ12756 1690 aa17.48■□□□□ 0.39
CIPC-202ENST00000554447 NUTM2FA1L443 756 aa17.48■□□□□ 0.39
CIPC-202ENST00000554447 ESCO1Q5FWF5 840 aa17.48■□□□□ 0.39
CIPC-202ENST00000554447 DEFB132Q7Z7B7 95 aa17.48■□□□□ 0.39
CIPC-202ENST00000554447 POLR3AO14802 1390 aaPredicted RBP17.48■□□□□ 0.39
CIPC-202ENST00000554447 ZNF692Q9BU19 519 aaPredicted RBP17.47■□□□□ 0.39
CIPC-202ENST00000554447 TERF2IPQ9NYB0 399 aa17.47■□□□□ 0.39
CIPC-202ENST00000554447 CABP1Q9NZU7 370 aa17.47■□□□□ 0.39
CIPC-202ENST00000554447 BRD4O60885 1362 aaPredicted RBP17.47■□□□□ 0.39
CIPC-202ENST00000554447 FNBP4Q8N3X1 1017 aaPredicted RBP17.46■□□□□ 0.39
CIPC-202ENST00000554447 ORAI2Q96SN7 254 aa17.46■□□□□ 0.39
CIPC-202ENST00000554447 CPSF1Q10570 1443 aaKnown RBP17.46■□□□□ 0.39
CIPC-202ENST00000554447 ANKRD36BQ8N2N9 1353 aa17.45■□□□□ 0.38
CIPC-202ENST00000554447 TMC1Q8TDI8 760 aa17.45■□□□□ 0.38
CIPC-202ENST00000554447 HDGFL2Q7Z4V5 671 aaPredicted RBP17.44■□□□□ 0.38
CIPC-202ENST00000554447 SLC12A5Q9H2X9 1139 aa17.44■□□□□ 0.38
CIPC-202ENST00000554447 ACEP12821 1306 aa17.44■□□□□ 0.38
CIPC-202ENST00000554447 NPHP3Q7Z494 1330 aa17.44■□□□□ 0.38
CIPC-202ENST00000554447 MYOM1P52179 1685 aa17.43■□□□□ 0.38
CIPC-202ENST00000554447 NGDNQ8NEJ9 315 aaKnown RBP17.43■□□□□ 0.38
CIPC-202ENST00000554447 BLMP54132 1417 aaPredicted RBP17.43■□□□□ 0.38
CIPC-202ENST00000554447 PSDA5PKW4 1024 aaPredicted RBP17.42■□□□□ 0.38
CIPC-202ENST00000554447 POLR3GLQ9BT43 218 aa17.42■□□□□ 0.38
CIPC-202ENST00000554447 CD163L1Q9NR16 1453 aa17.42■□□□□ 0.38
CIPC-202ENST00000554447 PMFBP1Q8TBY8 1022 aa17.41■□□□□ 0.38
CIPC-202ENST00000554447 RGPD8O14715 1765 aaPredicted RBP17.4■□□□□ 0.38
CIPC-202ENST00000554447 SF3B2Q13435 895 aaKnown RBP17.4■□□□□ 0.38
CIPC-202ENST00000554447 GJD4Q96KN9 370 aaPredicted RBP17.4■□□□□ 0.38
CIPC-202ENST00000554447 A0A1W2PP64 1363 aa17.4■□□□□ 0.38
CIPC-202ENST00000554447 USP6P35125 1406 aa17.39■□□□□ 0.38
CIPC-202ENST00000554447 BCL9LQ86UU0 1499 aa17.39■□□□□ 0.37
CIPC-202ENST00000554447 FOXO3O43524 673 aa17.39■□□□□ 0.37
CIPC-202ENST00000554447 PSME1Q06323 249 aa17.39■□□□□ 0.37
CIPC-202ENST00000554447 KTN1Q86UP2 1357 aaKnown RBP17.39■□□□□ 0.37
CIPC-202ENST00000554447 EDC4Q6P2E9 1401 aaKnown RBP17.38■□□□□ 0.37
CIPC-202ENST00000554447 BRWD3Q6RI45 1802 aa17.38■□□□□ 0.37
CIPC-202ENST00000554447 SOS2Q07890 1332 aaPredicted RBP17.38■□□□□ 0.37
CIPC-202ENST00000554447 SSH2Q76I76 1423 aa17.38■□□□□ 0.37
CIPC-202ENST00000554447 PANK3Q9H999 370 aa17.37■□□□□ 0.37
CIPC-202ENST00000554447 MARF1Q9Y4F3 1742 aaKnown RBP17.37■□□□□ 0.37
CIPC-202ENST00000554447 TTC21AQ8NDW8 1320 aa17.37■□□□□ 0.37
CIPC-202ENST00000554447 SBNO1A3KN83 1393 aa17.37■□□□□ 0.37
CIPC-202ENST00000554447 AKAP12Q02952 1782 aa17.36■□□□□ 0.37
CIPC-202ENST00000554447 KRT28Q7Z3Y7 464 aa17.36■□□□□ 0.37
CIPC-202ENST00000554447 PXDNQ92626 1479 aa17.36■□□□□ 0.37
CIPC-202ENST00000554447 COL22A1Q8NFW1 1626 aaPredicted RBP17.36■□□□□ 0.37
CIPC-202ENST00000554447 MON2Q7Z3U7 1717 aa17.35■□□□□ 0.37
CIPC-202ENST00000554447 TTC21BQ7Z4L5 1316 aa17.33■□□□□ 0.36
CIPC-202ENST00000554447 PER1O15534 1290 aaPredicted RBP17.33■□□□□ 0.36
CIPC-202ENST00000554447 CARD14Q9BXL6 1004 aa17.33■□□□□ 0.36
CIPC-202ENST00000554447 KNSTRNQ9Y448 316 aa17.33■□□□□ 0.36
CIPC-202ENST00000554447 GLI3P10071 1580 aa17.32■□□□□ 0.36
CIPC-202ENST00000554447 NRKQ7Z2Y5 1582 aa17.32■□□□□ 0.36
CIPC-202ENST00000554447 NSD3Q9BZ95 1437 aa17.32■□□□□ 0.36
CIPC-202ENST00000554447 NPC1L1Q9UHC9 1359 aa17.32■□□□□ 0.36
CIPC-202ENST00000554447 CGNL1Q0VF96 1302 aa17.32■□□□□ 0.36
CIPC-202ENST00000554447 DDX10Q13206 875 aaKnown RBP17.32■□□□□ 0.36
CIPC-202ENST00000554447 ARHGEF10O15013 1369 aa17.31■□□□□ 0.36
CIPC-202ENST00000554447 NSD2O96028 1365 aa17.31■□□□□ 0.36
CIPC-202ENST00000554447 SPATA31A3Q5VYP0 1347 aa17.31■□□□□ 0.36
CIPC-202ENST00000554447 TNS3Q68CZ2 1445 aa17.3■□□□□ 0.36
CIPC-202ENST00000554447 TRPM3Q9HCF6 1732 aaPredicted RBP17.3■□□□□ 0.36
CIPC-202ENST00000554447 YY1P25490 414 aa17.3■□□□□ 0.36
CIPC-202ENST00000554447 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.3■□□□□ 0.36
CIPC-202ENST00000554447 USP31Q70CQ4 1352 aa17.29■□□□□ 0.36
CIPC-202ENST00000554447 UNC5CLQ8IV45 518 aa17.28■□□□□ 0.36
CIPC-202ENST00000554447 SEPT12Q8IYM1 358 aa17.28■□□□□ 0.36
CIPC-202ENST00000554447 PAK3O75914 559 aaPredicted RBP17.27■□□□□ 0.36
CIPC-202ENST00000554447 XPCQ01831 940 aaPredicted RBP17.27■□□□□ 0.36
CIPC-202ENST00000554447 FYB1O15117 783 aa17.26■□□□□ 0.35
CIPC-202ENST00000554447 AMER1Q5JTC6 1135 aaPredicted RBP17.26■□□□□ 0.35
CIPC-202ENST00000554447 NLRP13Q86W25 1043 aa17.26■□□□□ 0.35
CIPC-202ENST00000554447 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.26■□□□□ 0.35
CIPC-202ENST00000554447 ABTB2Q8N961 1025 aa17.26■□□□□ 0.35
CIPC-202ENST00000554447 ALS2Q96Q42 1657 aa17.26■□□□□ 0.35
CIPC-202ENST00000554447 BAG6P46379 1132 aa17.25■□□□□ 0.35
CIPC-202ENST00000554447 USP54Q70EL1 1684 aa17.25■□□□□ 0.35
CIPC-202ENST00000554447 R3HDM1Q15032 1099 aaKnown RBP17.24■□□□□ 0.35
CIPC-202ENST00000554447 OVOS2A0A0J9YW53 1432 aa17.23■□□□□ 0.35
CIPC-202ENST00000554447 OVOS2Q6IE36 1432 aa17.23■□□□□ 0.35
CIPC-202ENST00000554447 NLRP6P59044 892 aa17.23■□□□□ 0.35
CIPC-202ENST00000554447 KRT27Q7Z3Y8 459 aa17.23■□□□□ 0.35
CIPC-202ENST00000554447 NME9Q86XW9 330 aa17.23■□□□□ 0.35
CIPC-202ENST00000554447 COG3Q96JB2 828 aa17.23■□□□□ 0.35
CIPC-202ENST00000554447 PIK3C2AO00443 1686 aa17.23■□□□□ 0.35
CIPC-202ENST00000554447 USP19O94966 1318 aa17.22■□□□□ 0.35
CIPC-202ENST00000554447 SLIT2O94813 1529 aa17.22■□□□□ 0.35
CIPC-202ENST00000554447 EN1Q05925 392 aaPredicted RBP17.21■□□□□ 0.35
CIPC-202ENST00000554447 CCDC9Q9Y3X0 531 aaKnown RBP17.21■□□□□ 0.35
CIPC-202ENST00000554447 KIF20BQ96Q89 1820 aa17.2■□□□□ 0.34
CIPC-202ENST00000554447 LMOD2Q6P5Q4 547 aa17.2■□□□□ 0.34
CIPC-202ENST00000554447 KCNH5Q8NCM2 988 aa17.2■□□□□ 0.34
CIPC-202ENST00000554447 GGNBP2Q9H3C7 697 aa17.2■□□□□ 0.34
CIPC-202ENST00000554447 A0A0G2JS52 829 aa17.19■□□□□ 0.34
CIPC-202ENST00000554447 MYT1Q01538 1121 aa17.19■□□□□ 0.34
CIPC-202ENST00000554447 SLIT3O75094 1523 aa17.19■□□□□ 0.34
CIPC-202ENST00000554447 ANKRD26Q9UPS8 1709 aa17.18■□□□□ 0.34
CIPC-202ENST00000554447 AATKQ6ZMQ8 1374 aa17.17■□□□□ 0.34
CIPC-202ENST00000554447 PLEKHG5O94827 1062 aa17.17■□□□□ 0.34
CIPC-202ENST00000554447 RALBP1Q15311 655 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms