RNA–Protein interactions for RNA: ENST00000553816.5

RDH11-205, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2

Gene RDH11, Length 1,163 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-205ENST00000553816 DLC1Q96QB1 1528 aa11.88□□□□□ -0.51
RDH11-205ENST00000553816 TIE1P35590 1138 aa11.88□□□□□ -0.51
RDH11-205ENST00000553816 STAC3Q96MF2 364 aa11.88□□□□□ -0.51
RDH11-205ENST00000553816 COL16A1Q07092 1604 aaPredicted RBP11.88□□□□□ -0.51
RDH11-205ENST00000553816 CDC42BPGQ6DT37 1551 aa11.88□□□□□ -0.51
RDH11-205ENST00000553816 NBPF1Q3BBV0 1214 aa11.87□□□□□ -0.51
RDH11-205ENST00000553816 AHDC1Q5TGY3 1603 aaPredicted RBP11.86□□□□□ -0.51
RDH11-205ENST00000553816 TTLL13PA6NNM8 815 aa11.86□□□□□ -0.51
RDH11-205ENST00000553816 SAFB2Q14151 953 aaKnown RBP eCLIP11.86□□□□□ -0.51
RDH11-205ENST00000553816 BRINP3Q76B58 766 aa11.86□□□□□ -0.51
RDH11-205ENST00000553816 TRAK1Q9UPV9 953 aa11.86□□□□□ -0.51
RDH11-205ENST00000553816 C1orf167Q5SNV9 1468 aa11.85□□□□□ -0.51
RDH11-205ENST00000553816 SIRT1Q96EB6 747 aa11.85□□□□□ -0.51
RDH11-205ENST00000553816 PRAM1Q96QH2 718 aa11.85□□□□□ -0.51
RDH11-205ENST00000553816 USP32Q8NFA0 1604 aa11.85□□□□□ -0.51
RDH11-205ENST00000553816 NBPF8Q3BBV2 869 aa11.84□□□□□ -0.51
RDH11-205ENST00000553816 DDX17Q92841 729 aaKnown RBP11.84□□□□□ -0.51
RDH11-205ENST00000553816 NUTM2FA1L443 756 aa11.83□□□□□ -0.52
RDH11-205ENST00000553816 MIER1Q8N108 512 aa11.83□□□□□ -0.52
RDH11-205ENST00000553816 ORAI2Q96SN7 254 aa11.83□□□□□ -0.52
RDH11-205ENST00000553816 ADGRB2O60241 1585 aa11.83□□□□□ -0.52
RDH11-205ENST00000553816 MED1Q15648 1581 aaPredicted RBP11.83□□□□□ -0.52
RDH11-205ENST00000553816 SEC24BO95487 1268 aa11.81□□□□□ -0.52
RDH11-205ENST00000553816 HIRIP3Q9BW71 556 aaPredicted RBP11.81□□□□□ -0.52
RDH11-205ENST00000553816 POGKQ9P215 609 aa11.81□□□□□ -0.52
RDH11-205ENST00000553816 SHPRHQ149N8 1683 aa11.81□□□□□ -0.52
RDH11-205ENST00000553816 QRICH2Q9H0J4 1663 aa11.81□□□□□ -0.52
RDH11-205ENST00000553816 MINK1Q8N4C8 1332 aaPredicted RBP11.8□□□□□ -0.52
RDH11-205ENST00000553816 TONSLQ96HA7 1378 aa11.79□□□□□ -0.52
RDH11-205ENST00000553816 TRIM35Q9UPQ4 493 aa11.79□□□□□ -0.52
RDH11-205ENST00000553816 ESCO1Q5FWF5 840 aa11.78□□□□□ -0.52
RDH11-205ENST00000553816 KIF1AQ12756 1690 aa11.78□□□□□ -0.52
RDH11-205ENST00000553816 CDAN1Q8IWY9 1227 aa11.77□□□□□ -0.53
RDH11-205ENST00000553816 ITSN1Q15811 1721 aa11.76□□□□□ -0.53
RDH11-205ENST00000553816 PRR36Q9H6K5 1346 aa11.76□□□□□ -0.53
RDH11-205ENST00000553816 ROCK2O75116 1388 aaKnown RBP11.76□□□□□ -0.53
RDH11-205ENST00000553816 JCADQ9P266 1359 aa11.76□□□□□ -0.53
RDH11-205ENST00000553816 DISP3Q9P2K9 1392 aa11.76□□□□□ -0.53
RDH11-205ENST00000553816 PXDNQ92626 1479 aa11.76□□□□□ -0.53
RDH11-205ENST00000553816 TULP4Q9NRJ4 1543 aa11.76□□□□□ -0.53
RDH11-205ENST00000553816 LRP6O75581 1613 aa11.75□□□□□ -0.53
RDH11-205ENST00000553816 TOPAZ1Q8N9V7 1692 aa11.75□□□□□ -0.53
RDH11-205ENST00000553816 WASLO00401 505 aaPredicted RBP11.75□□□□□ -0.53
RDH11-205ENST00000553816 SOS2Q07890 1332 aaPredicted RBP11.75□□□□□ -0.53
RDH11-205ENST00000553816 RALGAPBQ86X10 1494 aa11.75□□□□□ -0.53
RDH11-205ENST00000553816 FOXO3O43524 673 aa11.74□□□□□ -0.53
RDH11-205ENST00000553816 PLEKHG5O94827 1062 aa11.74□□□□□ -0.53
RDH11-205ENST00000553816 XPCQ01831 940 aaPredicted RBP11.74□□□□□ -0.53
RDH11-205ENST00000553816 PCDHB13Q9Y5F0 798 aa11.74□□□□□ -0.53
RDH11-205ENST00000553816 GPRASP1Q5JY77 1395 aa11.74□□□□□ -0.53
RDH11-205ENST00000553816 ATP7BP35670 1465 aa11.74□□□□□ -0.53
RDH11-205ENST00000553816 CENPJQ9HC77 1338 aaPredicted RBP11.73□□□□□ -0.53
RDH11-205ENST00000553816 TRPM3Q9HCF6 1732 aaPredicted RBP11.73□□□□□ -0.53
RDH11-205ENST00000553816 ANKARQ7Z5J8 1434 aa11.72□□□□□ -0.53
RDH11-205ENST00000553816 PNPLA6Q8IY17 1366 aa11.72□□□□□ -0.53
RDH11-205ENST00000553816 CLSPNQ9HAW4 1339 aa11.72□□□□□ -0.53
RDH11-205ENST00000553816 PMFBP1Q8TBY8 1022 aa11.72□□□□□ -0.53
RDH11-205ENST00000553816 CDK19Q9BWU1 502 aa11.72□□□□□ -0.53
RDH11-205ENST00000553816 PHF8Q9UPP1 1060 aa11.72□□□□□ -0.53
RDH11-205ENST00000553816 COL22A1Q8NFW1 1626 aaPredicted RBP11.71□□□□□ -0.53
RDH11-205ENST00000553816 NPHP3Q7Z494 1330 aa11.71□□□□□ -0.53
RDH11-205ENST00000553816 IER5LQ5T953 404 aa11.71□□□□□ -0.53
RDH11-205ENST00000553816 ILDR2Q71H61 639 aa11.71□□□□□ -0.53
RDH11-205ENST00000553816 CCER1Q8TC90 406 aaPredicted RBP11.71□□□□□ -0.53
RDH11-205ENST00000553816 LRRC59Q96AG4 307 aaKnown RBP11.71□□□□□ -0.53
RDH11-205ENST00000553816 MARF1Q9Y4F3 1742 aaKnown RBP11.7□□□□□ -0.54
RDH11-205ENST00000553816 IFNL1Q8IU54 200 aa11.7□□□□□ -0.54
RDH11-205ENST00000553816 SLAIN1Q8ND83 568 aa11.7□□□□□ -0.54
RDH11-205ENST00000553816 NUDT16Q96DE0 195 aaKnown RBP11.7□□□□□ -0.54
RDH11-205ENST00000553816 CARD11Q9BXL7 1154 aa11.7□□□□□ -0.54
RDH11-205ENST00000553816 RGS17Q9UGC6 210 aaPredicted RBP11.7□□□□□ -0.54
RDH11-205ENST00000553816 ABCA3Q99758 1704 aa11.69□□□□□ -0.54
RDH11-205ENST00000553816 ALS2Q96Q42 1657 aa11.69□□□□□ -0.54
RDH11-205ENST00000553816 NUTM2BA6NNL0 878 aaPredicted RBP11.69□□□□□ -0.54
RDH11-205ENST00000553816 NUTM2EB1AL46 878 aaPredicted RBP11.69□□□□□ -0.54
RDH11-205ENST00000553816 ST18O60284 1047 aa11.69□□□□□ -0.54
RDH11-205ENST00000553816 KRT28Q7Z3Y7 464 aa11.69□□□□□ -0.54
RDH11-205ENST00000553816 NUTM2AQ8IVF1 878 aaPredicted RBP11.69□□□□□ -0.54
RDH11-205ENST00000553816 SPATA31A6Q5VVP1 1343 aa11.68□□□□□ -0.54
RDH11-205ENST00000553816 NUBP1P53384 320 aa11.68□□□□□ -0.54
RDH11-205ENST00000553816 CABP2Q9NPB3 220 aa11.68□□□□□ -0.54
RDH11-205ENST00000553816 EIF3AQ14152 1382 aaKnown RBP11.67□□□□□ -0.54
RDH11-205ENST00000553816 CRYBG1Q9Y4K1 1723 aa11.67□□□□□ -0.54
RDH11-205ENST00000553816 PLCD3Q8N3E9 789 aa11.67□□□□□ -0.54
RDH11-205ENST00000553816 SGIP1Q9BQI5 828 aa11.67□□□□□ -0.54
RDH11-205ENST00000553816 SPATA31A3Q5VYP0 1347 aa11.66□□□□□ -0.54
RDH11-205ENST00000553816 AKAP12Q02952 1782 aa11.66□□□□□ -0.54
RDH11-205ENST00000553816 SRPK2P78362 688 aaKnown RBP11.65□□□□□ -0.54
RDH11-205ENST00000553816 PSME1Q06323 249 aa11.65□□□□□ -0.54
RDH11-205ENST00000553816 TMEM106CQ9BVX2 250 aa11.65□□□□□ -0.54
RDH11-205ENST00000553816 TNS3Q68CZ2 1445 aa11.65□□□□□ -0.54
RDH11-205ENST00000553816 ACEP12821 1306 aa11.64□□□□□ -0.55
RDH11-205ENST00000553816 PPIP5K1Q6PFW1 1433 aa11.64□□□□□ -0.55
RDH11-205ENST00000553816 NGDNQ8NEJ9 315 aaKnown RBP11.64□□□□□ -0.55
RDH11-205ENST00000553816 TIMELESSQ9UNS1 1208 aa11.64□□□□□ -0.55
RDH11-205ENST00000553816 SBNO1A3KN83 1393 aa11.64□□□□□ -0.55
RDH11-205ENST00000553816 ADAMTS2O95450 1211 aa11.63□□□□□ -0.55
RDH11-205ENST00000553816 POTEAQ6S8J7 498 aa11.63□□□□□ -0.55
RDH11-205ENST00000553816 POLR3AO14802 1390 aaPredicted RBP11.63□□□□□ -0.55
RDH11-205ENST00000553816 SBNO2Q9Y2G9 1366 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms