RNA–Protein interactions for RNA: ENST00000553718.1

TTC8-208, Transcript of tetratricopeptide repeat domain 8, humanhuman

TSL 3

Gene TTC8, Length 479 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC8-208ENST00000553718 CCDC61Q9Y6R9 512 aa13.94□□□□□ -0.18
TTC8-208ENST00000553718 DIAPH1O60610 1272 aaKnown RBP13.93□□□□□ -0.18
TTC8-208ENST00000553718 GGNBP2Q9H3C7 697 aa13.93□□□□□ -0.18
TTC8-208ENST00000553718 KIF20BQ96Q89 1820 aa13.92□□□□□ -0.18
TTC8-208ENST00000553718 TNNT2P45379 298 aaPredicted RBP13.92□□□□□ -0.18
TTC8-208ENST00000553718 METP08581 1390 aa13.92□□□□□ -0.18
TTC8-208ENST00000553718 UBR1Q8IWV7 1749 aa13.92□□□□□ -0.18
TTC8-208ENST00000553718 RARSP54136 660 aaKnown RBP13.91□□□□□ -0.18
TTC8-208ENST00000553718 C20orf194Q5TEA3 1177 aa13.91□□□□□ -0.18
TTC8-208ENST00000553718 WAPLQ7Z5K2 1190 aa13.91□□□□□ -0.18
TTC8-208ENST00000553718 BACH2Q9BYV9 841 aa13.91□□□□□ -0.18
TTC8-208ENST00000553718 ANP32AP39687 249 aaKnown RBP13.9□□□□□ -0.18
TTC8-208ENST00000553718 TMPOP42166 694 aaKnown RBP13.9□□□□□ -0.18
TTC8-208ENST00000553718 ZNF428Q96B54 188 aa13.9□□□□□ -0.18
TTC8-208ENST00000553718 SLIT1O75093 1534 aa13.9□□□□□ -0.19
TTC8-208ENST00000553718 ADAMTS13Q76LX8 1427 aa13.9□□□□□ -0.19
TTC8-208ENST00000553718 MAPK8IP3Q9UPT6 1336 aa13.9□□□□□ -0.19
TTC8-208ENST00000553718 ARHGAP23Q9P227 1491 aa13.89□□□□□ -0.19
TTC8-208ENST00000553718 MSH5O43196 834 aa13.89□□□□□ -0.19
TTC8-208ENST00000553718 NEFMP07197 916 aa13.89□□□□□ -0.19
TTC8-208ENST00000553718 PDE4AP27815 886 aa13.89□□□□□ -0.19
TTC8-208ENST00000553718 NUDT16Q96DE0 195 aaKnown RBP13.89□□□□□ -0.19
TTC8-208ENST00000553718 TBX22Q9Y458 520 aa13.89□□□□□ -0.19
TTC8-208ENST00000553718 DMRT2Q9Y5R5 561 aa13.89□□□□□ -0.19
TTC8-208ENST00000553718 PPIP5K1Q6PFW1 1433 aa13.89□□□□□ -0.19
TTC8-208ENST00000553718 PLEKHG3A1L390 1219 aa13.88□□□□□ -0.19
TTC8-208ENST00000553718 BCAR3O75815 825 aa13.88□□□□□ -0.19
TTC8-208ENST00000553718 CALD1Q05682 793 aaKnown RBP13.88□□□□□ -0.19
TTC8-208ENST00000553718 POLKQ9UBT6 870 aa13.88□□□□□ -0.19
TTC8-208ENST00000553718 IPO9Q96P70 1041 aaKnown RBP13.87□□□□□ -0.19
TTC8-208ENST00000553718 EID1Q9Y6B2 187 aa13.87□□□□□ -0.19
TTC8-208ENST00000553718 CDK12Q9NYV4 1490 aaPredicted RBP13.87□□□□□ -0.19
TTC8-208ENST00000553718 U2SURPO15042 1029 aaKnown RBP13.86□□□□□ -0.19
TTC8-208ENST00000553718 BRPF1P55201 1214 aaPredicted RBP13.86□□□□□ -0.19
TTC8-208ENST00000553718 ERICH6Q7L0X2 663 aa13.86□□□□□ -0.19
TTC8-208ENST00000553718 PMFBP1Q8TBY8 1022 aa13.86□□□□□ -0.19
TTC8-208ENST00000553718 MON2Q7Z3U7 1717 aa13.86□□□□□ -0.19
TTC8-208ENST00000553718 DIP2AQ14689 1571 aa13.85□□□□□ -0.19
TTC8-208ENST00000553718 TXNDC2Q86VQ3 553 aa13.85□□□□□ -0.19
TTC8-208ENST00000553718 CLUAP1Q96AJ1 413 aa13.85□□□□□ -0.19
TTC8-208ENST00000553718 TRIM35Q9UPQ4 493 aa13.85□□□□□ -0.19
TTC8-208ENST00000553718 NEUROD2Q15784 382 aa13.84□□□□□ -0.19
TTC8-208ENST00000553718 THEMISQ8N1K5 641 aaPredicted RBP13.84□□□□□ -0.19
TTC8-208ENST00000553718 COG3Q96JB2 828 aa13.84□□□□□ -0.19
TTC8-208ENST00000553718 RRP7AQ9Y3A4 280 aaKnown RBP13.84□□□□□ -0.19
TTC8-208ENST00000553718 PIK3R4Q99570 1358 aa13.83□□□□□ -0.19
TTC8-208ENST00000553718 AKAP12Q02952 1782 aa13.83□□□□□ -0.19
TTC8-208ENST00000553718 CANXP27824 592 aaKnown RBP13.83□□□□□ -0.2
TTC8-208ENST00000553718 RIPK4P57078 832 aa13.83□□□□□ -0.2
TTC8-208ENST00000553718 ALDH1L2Q3SY69 923 aa13.83□□□□□ -0.2
TTC8-208ENST00000553718 ZKSCAN2Q63HK3 967 aa13.83□□□□□ -0.2
TTC8-208ENST00000553718 RSPH6AQ9H0K4 717 aa13.83□□□□□ -0.2
TTC8-208ENST00000553718 PTCH1Q13635 1447 aa13.82□□□□□ -0.2
TTC8-208ENST00000553718 IL13P35225 146 aa13.82□□□□□ -0.2
TTC8-208ENST00000553718 LMOD3Q0VAK6 560 aa13.82□□□□□ -0.2
TTC8-208ENST00000553718 C3P01024 1663 aa13.82□□□□□ -0.2
TTC8-208ENST00000553718 FAM161AQ3B820 660 aa13.81□□□□□ -0.2
TTC8-208ENST00000553718 NOP58Q9Y2X3 529 aaKnown RBP13.81□□□□□ -0.2
TTC8-208ENST00000553718 ROBO2Q9HCK4 1378 aa13.81□□□□□ -0.2
TTC8-208ENST00000553718 IPO8O15397 1037 aaKnown RBP13.8□□□□□ -0.2
TTC8-208ENST00000553718 LTKP29376 864 aa13.8□□□□□ -0.2
TTC8-208ENST00000553718 NFE2L2Q16236 605 aa13.8□□□□□ -0.2
TTC8-208ENST00000553718 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.8□□□□□ -0.2
TTC8-208ENST00000553718 FBXO41Q8TF61 875 aa13.8□□□□□ -0.2
TTC8-208ENST00000553718 DDRGK1Q96HY6 314 aa13.8□□□□□ -0.2
TTC8-208ENST00000553718 CHMP4BQ9H444 224 aaKnown RBP13.8□□□□□ -0.2
TTC8-208ENST00000553718 ZBTB47Q9UFB7 747 aaPredicted RBP13.8□□□□□ -0.2
TTC8-208ENST00000553718 TTC21AQ8NDW8 1320 aa13.8□□□□□ -0.2
TTC8-208ENST00000553718 TOPAZ1Q8N9V7 1692 aa13.79□□□□□ -0.2
TTC8-208ENST00000553718 ITSN1Q15811 1721 aa13.79□□□□□ -0.2
TTC8-208ENST00000553718 PRR36Q9H6K5 1346 aa13.79□□□□□ -0.2
TTC8-208ENST00000553718 USP31Q70CQ4 1352 aa13.79□□□□□ -0.2
TTC8-208ENST00000553718 MAP2P11137 1827 aaKnown RBP13.78□□□□□ -0.2
TTC8-208ENST00000553718 MVPQ14764 893 aaKnown RBP13.78□□□□□ -0.2
TTC8-208ENST00000553718 DZIP1LQ8IYY4 767 aaKnown RBP13.78□□□□□ -0.2
TTC8-208ENST00000553718 RWDD1Q9H446 243 aaPredicted RBP13.78□□□□□ -0.2
TTC8-208ENST00000553718 TTC21BQ7Z4L5 1316 aa13.78□□□□□ -0.2
TTC8-208ENST00000553718 KIF16BQ96L93 1317 aa13.78□□□□□ -0.2
TTC8-208ENST00000553718 SSH2Q76I76 1423 aa13.78□□□□□ -0.2
TTC8-208ENST00000553718 PRKAR2BP31323 418 aa13.77□□□□□ -0.21
TTC8-208ENST00000553718 GNAI1P63096 354 aa13.77□□□□□ -0.21
TTC8-208ENST00000553718 EXOSC9Q06265 439 aaKnown RBP13.77□□□□□ -0.21
TTC8-208ENST00000553718 NME9Q86XW9 330 aa13.77□□□□□ -0.21
TTC8-208ENST00000553718 ARHGAP45Q92619 1136 aa13.77□□□□□ -0.21
TTC8-208ENST00000553718 IFT57Q9NWB7 429 aa13.77□□□□□ -0.21
TTC8-208ENST00000553718 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.77□□□□□ -0.21
TTC8-208ENST00000553718 DDX19BQ9UMR2 479 aa13.77□□□□□ -0.21
TTC8-208ENST00000553718 COG6Q9Y2V7 657 aa13.77□□□□□ -0.21
TTC8-208ENST00000553718 LRRC7Q96NW7 1537 aa13.76□□□□□ -0.21
TTC8-208ENST00000553718 OVOS2A0A0J9YW53 1432 aa13.76□□□□□ -0.21
TTC8-208ENST00000553718 USP6P35125 1406 aa13.76□□□□□ -0.21
TTC8-208ENST00000553718 OVOS2Q6IE36 1432 aa13.76□□□□□ -0.21
TTC8-208ENST00000553718 ANKARQ7Z5J8 1434 aa13.76□□□□□ -0.21
TTC8-208ENST00000553718 PTPRUQ92729 1446 aa13.76□□□□□ -0.21
TTC8-208ENST00000553718 HAP1P54257 671 aaPredicted RBP13.76□□□□□ -0.21
TTC8-208ENST00000553718 FRAT1Q92837 279 aaPredicted RBP13.76□□□□□ -0.21
TTC8-208ENST00000553718 NRKQ7Z2Y5 1582 aa13.75□□□□□ -0.21
TTC8-208ENST00000553718 ZNF853P0CG23 659 aa13.75□□□□□ -0.21
TTC8-208ENST00000553718 ATF7IPQ6VMQ6 1270 aa13.75□□□□□ -0.21
TTC8-208ENST00000553718 PANK1Q8TE04 598 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms