RNA–Protein interactions for RNA: ENST00000553404.5

LIN52-201, Transcript of lin-52 DREAM MuvB core complex component, humanhuman

TSL 2

Gene LIN52, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN52-201ENST00000553404 KRT28Q7Z3Y7 464 aa13.07□□□□□ -0.32
LIN52-201ENST00000553404 FMN2Q9NZ56 1722 aa13.07□□□□□ -0.32
LIN52-201ENST00000553404 NGLY1Q96IV0 654 aa13.07□□□□□ -0.32
LIN52-201ENST00000553404 DLC1Q96QB1 1528 aa13.06□□□□□ -0.32
LIN52-201ENST00000553404 PXDNQ92626 1479 aa13.06□□□□□ -0.32
LIN52-201ENST00000553404 FAM9BQ8IZU0 186 aa13.06□□□□□ -0.32
LIN52-201ENST00000553404 LAS1LQ9Y4W2 734 aaKnown RBP13.06□□□□□ -0.32
LIN52-201ENST00000553404 ZBED9Q6R2W3 1325 aa13.04□□□□□ -0.32
LIN52-201ENST00000553404 PRR36Q9H6K5 1346 aa13.04□□□□□ -0.32
LIN52-201ENST00000553404 WASLO00401 505 aaPredicted RBP13.04□□□□□ -0.32
LIN52-201ENST00000553404 PSME1Q06323 249 aa13.04□□□□□ -0.32
LIN52-201ENST00000553404 LMOD2Q6P5Q4 547 aa13.04□□□□□ -0.32
LIN52-201ENST00000553404 NPM2Q86SE8 214 aaKnown RBP13.04□□□□□ -0.32
LIN52-201ENST00000553404 PPM1GO15355 546 aaPredicted RBP13.04□□□□□ -0.32
LIN52-201ENST00000553404 QTRT2Q9H974 415 aaKnown RBP13.04□□□□□ -0.32
LIN52-201ENST00000553404 RXRBP28702 533 aa13.03□□□□□ -0.32
LIN52-201ENST00000553404 CABLES1Q8TDN4 633 aa13.03□□□□□ -0.32
LIN52-201ENST00000553404 SPATA31A3Q5VYP0 1347 aa13.03□□□□□ -0.32
LIN52-201ENST00000553404 BRPF3Q9ULD4 1205 aa13.02□□□□□ -0.32
LIN52-201ENST00000553404 USP32Q8NFA0 1604 aa13.01□□□□□ -0.33
LIN52-201ENST00000553404 CDK19Q9BWU1 502 aa13.01□□□□□ -0.33
LIN52-201ENST00000553404 USP21Q9UK80 565 aa13.01□□□□□ -0.33
LIN52-201ENST00000553404 ARHGEF28Q8N1W1 1705 aaKnown RBP13□□□□□ -0.33
LIN52-201ENST00000553404 NUDT16Q96DE0 195 aaKnown RBP13□□□□□ -0.33
LIN52-201ENST00000553404 MRS2Q9HD23 443 aa13□□□□□ -0.33
LIN52-201ENST00000553404 CCDC184Q52MB2 194 aa12.99□□□□□ -0.33
LIN52-201ENST00000553404 NGDNQ8NEJ9 315 aaKnown RBP12.99□□□□□ -0.33
LIN52-201ENST00000553404 KIF1AQ12756 1690 aa12.99□□□□□ -0.33
LIN52-201ENST00000553404 ADGRB2O60241 1585 aa12.99□□□□□ -0.33
LIN52-201ENST00000553404 ANKARQ7Z5J8 1434 aa12.98□□□□□ -0.33
LIN52-201ENST00000553404 HAP1P54257 671 aaPredicted RBP12.98□□□□□ -0.33
LIN52-201ENST00000553404 GSE1Q14687 1217 aa12.98□□□□□ -0.33
LIN52-201ENST00000553404 FNBP4Q8N3X1 1017 aaPredicted RBP12.98□□□□□ -0.33
LIN52-201ENST00000553404 COL22A1Q8NFW1 1626 aaPredicted RBP12.98□□□□□ -0.33
LIN52-201ENST00000553404 NBPF8Q3BBV2 869 aa12.97□□□□□ -0.33
LIN52-201ENST00000553404 ARXQ96QS3 562 aa12.97□□□□□ -0.33
LIN52-201ENST00000553404 RSPH6AQ9H0K4 717 aa12.97□□□□□ -0.33
LIN52-201ENST00000553404 RBM6P78332 1123 aaKnown RBP12.97□□□□□ -0.33
LIN52-201ENST00000553404 KIAA1210Q9ULL0 1709 aa12.97□□□□□ -0.33
LIN52-201ENST00000553404 TULP4Q9NRJ4 1543 aa12.97□□□□□ -0.33
LIN52-201ENST00000553404 TNS3Q68CZ2 1445 aa12.96□□□□□ -0.33
LIN52-201ENST00000553404 CENPJQ9HC77 1338 aaPredicted RBP12.95□□□□□ -0.34
LIN52-201ENST00000553404 CABP2Q9NPB3 220 aa12.95□□□□□ -0.34
LIN52-201ENST00000553404 SBNO1A3KN83 1393 aa12.95□□□□□ -0.34
LIN52-201ENST00000553404 GPRASP1Q5JY77 1395 aa12.95□□□□□ -0.34
LIN52-201ENST00000553404 PDIA4P13667 645 aaKnown RBP12.95□□□□□ -0.34
LIN52-201ENST00000553404 TRPC5Q9UL62 973 aaPredicted RBP12.95□□□□□ -0.34
LIN52-201ENST00000553404 EIF3AQ14152 1382 aaKnown RBP12.95□□□□□ -0.34
LIN52-201ENST00000553404 SRPK2P78362 688 aaKnown RBP12.94□□□□□ -0.34
LIN52-201ENST00000553404 PDE4CQ08493 712 aa12.94□□□□□ -0.34
LIN52-201ENST00000553404 CCDC61Q9Y6R9 512 aa12.94□□□□□ -0.34
LIN52-201ENST00000553404 ATP7BP35670 1465 aa12.94□□□□□ -0.34
LIN52-201ENST00000553404 BCL9LQ86UU0 1499 aa12.94□□□□□ -0.34
LIN52-201ENST00000553404 ROCK2O75116 1388 aaKnown RBP12.93□□□□□ -0.34
LIN52-201ENST00000553404 NUTM2GQ5VZR2 741 aa12.93□□□□□ -0.34
LIN52-201ENST00000553404 PRKRIP1Q9H875 184 aaPredicted RBP12.93□□□□□ -0.34
LIN52-201ENST00000553404 ACEP12821 1306 aa12.93□□□□□ -0.34
LIN52-201ENST00000553404 GLIPR1L2Q4G1C9 344 aa12.93□□□□□ -0.34
LIN52-201ENST00000553404 ARHGEF10O15013 1369 aa12.92□□□□□ -0.34
LIN52-201ENST00000553404 FAM83GA6ND36 823 aa12.92□□□□□ -0.34
LIN52-201ENST00000553404 HSPA5P11021 654 aaKnown RBP12.92□□□□□ -0.34
LIN52-201ENST00000553404 RGS12O14924 1447 aa12.92□□□□□ -0.34
LIN52-201ENST00000553404 SMG6Q86US8 1419 aaKnown RBP12.92□□□□□ -0.34
LIN52-201ENST00000553404 TCERG1O14776 1098 aaKnown RBP12.91□□□□□ -0.34
LIN52-201ENST00000553404 UPF1Q92900 1129 aaKnown RBP eCLIP12.91□□□□□ -0.34
LIN52-201ENST00000553404 MARF1Q9Y4F3 1742 aaKnown RBP12.91□□□□□ -0.34
LIN52-201ENST00000553404 UNC5CLQ8IV45 518 aa12.91□□□□□ -0.34
LIN52-201ENST00000553404 NUDCQ9Y266 331 aa12.91□□□□□ -0.34
LIN52-201ENST00000553404 TRPM1Q7Z4N2 1603 aa12.91□□□□□ -0.34
LIN52-201ENST00000553404 ATRNO75882 1429 aa12.9□□□□□ -0.34
LIN52-201ENST00000553404 KLHL34Q8N239 644 aa12.9□□□□□ -0.34
LIN52-201ENST00000553404 GJD4Q96KN9 370 aaPredicted RBP12.9□□□□□ -0.34
LIN52-201ENST00000553404 TRPM3Q9HCF6 1732 aaPredicted RBP12.9□□□□□ -0.34
LIN52-201ENST00000553404 PLEKHG3A1L390 1219 aa12.9□□□□□ -0.34
LIN52-201ENST00000553404 PDE4AP27815 886 aa12.9□□□□□ -0.34
LIN52-201ENST00000553404 CABP1Q9NZU7 370 aa12.89□□□□□ -0.35
LIN52-201ENST00000553404 CDK12Q9NYV4 1490 aaPredicted RBP12.89□□□□□ -0.35
LIN52-201ENST00000553404 EIF4G2P78344 907 aaKnown RBP eCLIP12.89□□□□□ -0.35
LIN52-201ENST00000553404 RNF123Q5XPI4 1314 aa12.89□□□□□ -0.35
LIN52-201ENST00000553404 SLIT2O94813 1529 aa12.88□□□□□ -0.35
LIN52-201ENST00000553404 QRICH2Q9H0J4 1663 aa12.88□□□□□ -0.35
LIN52-201ENST00000553404 DDRGK1Q96HY6 314 aa12.88□□□□□ -0.35
LIN52-201ENST00000553404 CARD11Q9BXL7 1154 aa12.88□□□□□ -0.35
LIN52-201ENST00000553404 CCDC9Q9Y3X0 531 aaKnown RBP12.88□□□□□ -0.35
LIN52-201ENST00000553404 FRAT1Q92837 279 aaPredicted RBP12.88□□□□□ -0.35
LIN52-201ENST00000553404 PPIP5K1Q6PFW1 1433 aa12.88□□□□□ -0.35
LIN52-201ENST00000553404 ALS2Q96Q42 1657 aa12.87□□□□□ -0.35
LIN52-201ENST00000553404 FAM43AQ8N2R8 423 aa12.87□□□□□ -0.35
LIN52-201ENST00000553404 BTG4Q9NY30 223 aa12.87□□□□□ -0.35
LIN52-201ENST00000553404 POLR3AO14802 1390 aaPredicted RBP12.87□□□□□ -0.35
LIN52-201ENST00000553404 EP400Q96L91 3159 aa12.87□□□□□ -0.35
LIN52-201ENST00000553404 ITSN1Q15811 1721 aa12.87□□□□□ -0.35
LIN52-201ENST00000553404 ZC3H6P61129 1189 aaKnown RBP12.87□□□□□ -0.35
LIN52-201ENST00000553404 EVC2Q86UK5 1308 aa12.87□□□□□ -0.35
LIN52-201ENST00000553404 ABTB2Q8N961 1025 aa12.87□□□□□ -0.35
LIN52-201ENST00000553404 CHRNA2Q15822 529 aa12.86□□□□□ -0.35
LIN52-201ENST00000553404 NFKBIBQ15653 356 aa12.85□□□□□ -0.35
LIN52-201ENST00000553404 BACH2Q9BYV9 841 aa12.85□□□□□ -0.35
LIN52-201ENST00000553404 ABCA3Q99758 1704 aa12.85□□□□□ -0.35
LIN52-201ENST00000553404 FGD1P98174 961 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms