RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 COL22A1Q8NFW1 1626 aaPredicted RBP14.22□□□□□ -0.13
TRAFD1-208ENST00000552890 NUTM2BA6NNL0 878 aaPredicted RBP14.21□□□□□ -0.13
TRAFD1-208ENST00000552890 NUTM2EB1AL46 878 aaPredicted RBP14.21□□□□□ -0.13
TRAFD1-208ENST00000552890 HSPA5P11021 654 aaKnown RBP14.21□□□□□ -0.13
TRAFD1-208ENST00000552890 NUTM2AQ8IVF1 878 aaPredicted RBP14.21□□□□□ -0.13
TRAFD1-208ENST00000552890 DISP3Q9P2K9 1392 aa14.21□□□□□ -0.14
TRAFD1-208ENST00000552890 KCNH5Q8NCM2 988 aa14.2□□□□□ -0.14
TRAFD1-208ENST00000552890 CPSF1Q10570 1443 aaKnown RBP14.2□□□□□ -0.14
TRAFD1-208ENST00000552890 MED1Q15648 1581 aaPredicted RBP14.19□□□□□ -0.14
TRAFD1-208ENST00000552890 EDC4Q6P2E9 1401 aaKnown RBP14.19□□□□□ -0.14
TRAFD1-208ENST00000552890 NGLY1Q96IV0 654 aa14.19□□□□□ -0.14
TRAFD1-208ENST00000552890 ANKRD36BQ8N2N9 1353 aa14.19□□□□□ -0.14
TRAFD1-208ENST00000552890 TTC21BQ7Z4L5 1316 aa14.17□□□□□ -0.14
TRAFD1-208ENST00000552890 NLRP6P59044 892 aa14.17□□□□□ -0.14
TRAFD1-208ENST00000552890 SLC12A5Q9H2X9 1139 aa14.17□□□□□ -0.14
TRAFD1-208ENST00000552890 TRPM3Q9HCF6 1732 aaPredicted RBP14.15□□□□□ -0.14
TRAFD1-208ENST00000552890 ADAMTS2O95450 1211 aa14.15□□□□□ -0.14
TRAFD1-208ENST00000552890 FNBP4Q8N3X1 1017 aaPredicted RBP14.15□□□□□ -0.14
TRAFD1-208ENST00000552890 C8orf37Q96NL8 207 aa14.15□□□□□ -0.14
TRAFD1-208ENST00000552890 ALS2Q96Q42 1657 aa14.14□□□□□ -0.15
TRAFD1-208ENST00000552890 SSH2Q76I76 1423 aa14.14□□□□□ -0.15
TRAFD1-208ENST00000552890 PRDM11Q9NQV5 511 aa14.13□□□□□ -0.15
TRAFD1-208ENST00000552890 TRPC5Q9UL62 973 aaPredicted RBP14.13□□□□□ -0.15
TRAFD1-208ENST00000552890 AKAP12Q02952 1782 aa14.13□□□□□ -0.15
TRAFD1-208ENST00000552890 USP19O94966 1318 aa14.13□□□□□ -0.15
TRAFD1-208ENST00000552890 A0A1W2PP64 1363 aa14.12□□□□□ -0.15
TRAFD1-208ENST00000552890 CPDO75976 1380 aa14.12□□□□□ -0.15
TRAFD1-208ENST00000552890 USP31Q70CQ4 1352 aa14.12□□□□□ -0.15
TRAFD1-208ENST00000552890 GCP02774 474 aa14.12□□□□□ -0.15
TRAFD1-208ENST00000552890 COG3Q96JB2 828 aa14.12□□□□□ -0.15
TRAFD1-208ENST00000552890 AFF2P51816 1311 aa14.12□□□□□ -0.15
TRAFD1-208ENST00000552890 CGNL1Q0VF96 1302 aa14.12□□□□□ -0.15
TRAFD1-208ENST00000552890 POLR3GLQ9BT43 218 aa14.11□□□□□ -0.15
TRAFD1-208ENST00000552890 USP21Q9UK80 565 aa14.11□□□□□ -0.15
TRAFD1-208ENST00000552890 MON2Q7Z3U7 1717 aa14.1□□□□□ -0.15
TRAFD1-208ENST00000552890 UNC5CLQ8IV45 518 aa14.1□□□□□ -0.15
TRAFD1-208ENST00000552890 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.1□□□□□ -0.15
TRAFD1-208ENST00000552890 LRP6O75581 1613 aa14.1□□□□□ -0.15
TRAFD1-208ENST00000552890 RXRBP28702 533 aa14.09□□□□□ -0.15
TRAFD1-208ENST00000552890 QTRT2Q9H974 415 aaKnown RBP14.09□□□□□ -0.15
TRAFD1-208ENST00000552890 KNSTRNQ9Y448 316 aa14.09□□□□□ -0.15
TRAFD1-208ENST00000552890 CD163L1Q9NR16 1453 aa14.08□□□□□ -0.16
TRAFD1-208ENST00000552890 RBM6P78332 1123 aaKnown RBP14.08□□□□□ -0.16
TRAFD1-208ENST00000552890 CABLES1Q8TDN4 633 aa14.08□□□□□ -0.16
TRAFD1-208ENST00000552890 NSD2O96028 1365 aa14.08□□□□□ -0.16
TRAFD1-208ENST00000552890 MARF1Q9Y4F3 1742 aaKnown RBP14.07□□□□□ -0.16
TRAFD1-208ENST00000552890 EVA1CP58658 441 aa14.07□□□□□ -0.16
TRAFD1-208ENST00000552890 NUTM2GQ5VZR2 741 aa14.07□□□□□ -0.16
TRAFD1-208ENST00000552890 ABCC6O95255 1503 aa14.06□□□□□ -0.16
TRAFD1-208ENST00000552890 NWD2Q9ULI1 1742 aa14.06□□□□□ -0.16
TRAFD1-208ENST00000552890 AATKQ6ZMQ8 1374 aa14.06□□□□□ -0.16
TRAFD1-208ENST00000552890 COL14A1Q05707 1796 aaKnown RBP14.06□□□□□ -0.16
TRAFD1-208ENST00000552890 SLIT2O94813 1529 aa14.05□□□□□ -0.16
TRAFD1-208ENST00000552890 FAM83GA6ND36 823 aa14.05□□□□□ -0.16
TRAFD1-208ENST00000552890 ZC3H6P61129 1189 aaKnown RBP14.05□□□□□ -0.16
TRAFD1-208ENST00000552890 VPS72Q15906 364 aa14.05□□□□□ -0.16
TRAFD1-208ENST00000552890 KIF7Q2M1P5 1343 aa14.05□□□□□ -0.16
TRAFD1-208ENST00000552890 KIF24Q5T7B8 1368 aa14.05□□□□□ -0.16
TRAFD1-208ENST00000552890 KIAA0232Q92628 1395 aa14.05□□□□□ -0.16
TRAFD1-208ENST00000552890 CDK12Q9NYV4 1490 aaPredicted RBP14.05□□□□□ -0.16
TRAFD1-208ENST00000552890 SLIT3O75094 1523 aa14.05□□□□□ -0.16
TRAFD1-208ENST00000552890 NRKQ7Z2Y5 1582 aa14.05□□□□□ -0.16
TRAFD1-208ENST00000552890 PANK3Q9H999 370 aa14.04□□□□□ -0.16
TRAFD1-208ENST00000552890 BTG4Q9NY30 223 aa14.04□□□□□ -0.16
TRAFD1-208ENST00000552890 WASHC2AQ641Q2 1341 aa14.04□□□□□ -0.16
TRAFD1-208ENST00000552890 FYB1O15117 783 aa14.03□□□□□ -0.16
TRAFD1-208ENST00000552890 PLEKHG5O94827 1062 aa14.03□□□□□ -0.16
TRAFD1-208ENST00000552890 ARHGEF25Q86VW2 580 aa14.03□□□□□ -0.16
TRAFD1-208ENST00000552890 NME9Q86XW9 330 aa14.03□□□□□ -0.16
TRAFD1-208ENST00000552890 CCDC7Q96M83 1385 aa14.03□□□□□ -0.16
TRAFD1-208ENST00000552890 NSD3Q9BZ95 1437 aa14.03□□□□□ -0.16
TRAFD1-208ENST00000552890 USP54Q70EL1 1684 aa14.03□□□□□ -0.16
TRAFD1-208ENST00000552890 ABCA3Q99758 1704 aa14.02□□□□□ -0.16
TRAFD1-208ENST00000552890 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.02□□□□□ -0.16
TRAFD1-208ENST00000552890 PIK3C2AO00443 1686 aa14.02□□□□□ -0.16
TRAFD1-208ENST00000552890 PHRF1Q9P1Y6 1649 aaKnown RBP14.02□□□□□ -0.16
TRAFD1-208ENST00000552890 OVOS2A0A0J9YW53 1432 aa14.02□□□□□ -0.16
TRAFD1-208ENST00000552890 OVOS2Q6IE36 1432 aa14.02□□□□□ -0.16
TRAFD1-208ENST00000552890 GJD4Q96KN9 370 aaPredicted RBP14.02□□□□□ -0.17
TRAFD1-208ENST00000552890 THRAP3Q9Y2W1 955 aaKnown RBP14.02□□□□□ -0.17
TRAFD1-208ENST00000552890 CCDC9Q9Y3X0 531 aaKnown RBP14.02□□□□□ -0.17
TRAFD1-208ENST00000552890 BCL9LQ86UU0 1499 aa14.01□□□□□ -0.17
TRAFD1-208ENST00000552890 ATRNO75882 1429 aa14.01□□□□□ -0.17
TRAFD1-208ENST00000552890 C11orf95C9JLR9 678 aaPredicted RBP14.01□□□□□ -0.17
TRAFD1-208ENST00000552890 CDCA7Q9BWT1 371 aaPredicted RBP14.01□□□□□ -0.17
TRAFD1-208ENST00000552890 RGS17Q9UGC6 210 aaPredicted RBP14.01□□□□□ -0.17
TRAFD1-208ENST00000552890 RTL1A6NKG5 1358 aa14□□□□□ -0.17
TRAFD1-208ENST00000552890 CRYBG1Q9Y4K1 1723 aa14□□□□□ -0.17
TRAFD1-208ENST00000552890 BLMP54132 1417 aaPredicted RBP13.99□□□□□ -0.17
TRAFD1-208ENST00000552890 NPC1L1Q9UHC9 1359 aa13.99□□□□□ -0.17
TRAFD1-208ENST00000552890 MYOM1P52179 1685 aa13.99□□□□□ -0.17
TRAFD1-208ENST00000552890 AMPHP49418 695 aa13.99□□□□□ -0.17
TRAFD1-208ENST00000552890 POTEAQ6S8J7 498 aa13.99□□□□□ -0.17
TRAFD1-208ENST00000552890 CARD14Q9BXL6 1004 aa13.99□□□□□ -0.17
TRAFD1-208ENST00000552890 IP6K1Q92551 441 aa13.98□□□□□ -0.17
TRAFD1-208ENST00000552890 GGNBP2Q9H3C7 697 aa13.98□□□□□ -0.17
TRAFD1-208ENST00000552890 SMG6Q86US8 1419 aaKnown RBP13.98□□□□□ -0.17
TRAFD1-208ENST00000552890 ZBTB7CA1YPR0 619 aa13.97□□□□□ -0.17
TRAFD1-208ENST00000552890 CSB-PGBD3P0DP91 1061 aa13.97□□□□□ -0.17
TRAFD1-208ENST00000552890 CHRNA2Q15822 529 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms