RNA–Protein interactions for RNA: ENST00000550657.1

UBE2N-205, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2 BASIC

Gene UBE2N, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-205ENST00000550657 ATAD2Q6PL18 1390 aa11.74□□□□□ -0.53
UBE2N-205ENST00000550657 YTHDC2Q9H6S0 1430 aaKnown RBP11.74□□□□□ -0.53
UBE2N-205ENST00000550657 USP35Q9P2H5 1018 aa11.74□□□□□ -0.53
UBE2N-205ENST00000550657 NOB1Q9ULX3 412 aaKnown RBP11.74□□□□□ -0.53
UBE2N-205ENST00000550657 TRIM27P14373 513 aa11.73□□□□□ -0.53
UBE2N-205ENST00000550657 THUMPD2Q9BTF0 503 aaKnown RBP11.73□□□□□ -0.53
UBE2N-205ENST00000550657 RIMBP3CA6NJZ7 1639 aa11.73□□□□□ -0.53
UBE2N-205ENST00000550657 RIMBP3BA6NNM3 1639 aa11.73□□□□□ -0.53
UBE2N-205ENST00000550657 PIK3C2BO00750 1634 aa11.73□□□□□ -0.53
UBE2N-205ENST00000550657 RIMBP3Q9UFD9 1639 aa11.73□□□□□ -0.53
UBE2N-205ENST00000550657 PRKAR2BP31323 418 aa11.73□□□□□ -0.53
UBE2N-205ENST00000550657 SLKQ9H2G2 1235 aaPredicted RBP11.73□□□□□ -0.53
UBE2N-205ENST00000550657 ARHGAP31Q2M1Z3 1444 aa11.72□□□□□ -0.53
UBE2N-205ENST00000550657 ZC3H13Q5T200 1668 aaKnown RBP11.72□□□□□ -0.53
UBE2N-205ENST00000550657 ELL2O00472 640 aaPredicted RBP11.72□□□□□ -0.53
UBE2N-205ENST00000550657 ZRANB1Q9UGI0 708 aa11.72□□□□□ -0.53
UBE2N-205ENST00000550657 FRAT2O75474 233 aaPredicted RBP11.72□□□□□ -0.53
UBE2N-205ENST00000550657 NCKAP5LQ9HCH0 1330 aa11.72□□□□□ -0.53
UBE2N-205ENST00000550657 USP19O94966 1318 aa11.71□□□□□ -0.53
UBE2N-205ENST00000550657 ARHGEF28Q8N1W1 1705 aaKnown RBP11.71□□□□□ -0.53
UBE2N-205ENST00000550657 TXNDC2Q86VQ3 553 aa11.71□□□□□ -0.54
UBE2N-205ENST00000550657 SPRYD3Q8NCJ5 442 aa11.71□□□□□ -0.54
UBE2N-205ENST00000550657 UPF2Q9HAU5 1272 aaKnown RBP11.71□□□□□ -0.54
UBE2N-205ENST00000550657 PTPRMP28827 1452 aa11.71□□□□□ -0.54
UBE2N-205ENST00000550657 TMEM57Q8N5G2 664 aa11.7□□□□□ -0.54
UBE2N-205ENST00000550657 EMILIN1Q9Y6C2 1016 aa11.7□□□□□ -0.54
UBE2N-205ENST00000550657 ATF7IPQ6VMQ6 1270 aa11.7□□□□□ -0.54
UBE2N-205ENST00000550657 RTN4Q9NQC3 1192 aaKnown RBP11.7□□□□□ -0.54
UBE2N-205ENST00000550657 NUTM2FA1L443 756 aa11.7□□□□□ -0.54
UBE2N-205ENST00000550657 NME9Q86XW9 330 aa11.7□□□□□ -0.54
UBE2N-205ENST00000550657 POLKQ9UBT6 870 aa11.7□□□□□ -0.54
UBE2N-205ENST00000550657 PHACTR3Q96KR7 559 aa11.69□□□□□ -0.54
UBE2N-205ENST00000550657 DIP2BQ9P265 1576 aa11.69□□□□□ -0.54
UBE2N-205ENST00000550657 PLPPR3Q6T4P5 718 aa11.69□□□□□ -0.54
UBE2N-205ENST00000550657 ESF1Q9H501 851 aaKnown RBP11.69□□□□□ -0.54
UBE2N-205ENST00000550657 ZFYVE9O95405 1425 aa11.69□□□□□ -0.54
UBE2N-205ENST00000550657 CD163L1Q9NR16 1453 aa11.68□□□□□ -0.54
UBE2N-205ENST00000550657 TSPOAP1O95153 1857 aa11.68□□□□□ -0.54
UBE2N-205ENST00000550657 MFAP1P55081 439 aaKnown RBP11.68□□□□□ -0.54
UBE2N-205ENST00000550657 RRS1Q15050 365 aaKnown RBP11.68□□□□□ -0.54
UBE2N-205ENST00000550657 IL27Q8NEV9 243 aa11.68□□□□□ -0.54
UBE2N-205ENST00000550657 DDX19BQ9UMR2 479 aa11.68□□□□□ -0.54
UBE2N-205ENST00000550657 BECN1Q14457 450 aa11.67□□□□□ -0.54
UBE2N-205ENST00000550657 GSE1Q14687 1217 aa11.67□□□□□ -0.54
UBE2N-205ENST00000550657 PNNQ9H307 717 aaKnown RBP11.67□□□□□ -0.54
UBE2N-205ENST00000550657 SOX12O15370 315 aa11.67□□□□□ -0.54
UBE2N-205ENST00000550657 AAMPQ13685 434 aa11.67□□□□□ -0.54
UBE2N-205ENST00000550657 USP32Q8NFA0 1604 aa11.66□□□□□ -0.54
UBE2N-205ENST00000550657 MYO5BQ9ULV0 1848 aa11.66□□□□□ -0.54
UBE2N-205ENST00000550657 FCHSD2O94868 740 aa11.66□□□□□ -0.54
UBE2N-205ENST00000550657 C1orf115Q9H7X2 142 aa11.66□□□□□ -0.54
UBE2N-205ENST00000550657 PREX1Q8TCU6 1659 aa11.66□□□□□ -0.54
UBE2N-205ENST00000550657 CT47B1P0C2W7 299 aaPredicted RBP11.66□□□□□ -0.54
UBE2N-205ENST00000550657 RSPH6AQ9H0K4 717 aa11.66□□□□□ -0.54
UBE2N-205ENST00000550657 TMEM131LA2VDJ0 1609 aa11.65□□□□□ -0.54
UBE2N-205ENST00000550657 ALKQ9UM73 1620 aa11.65□□□□□ -0.54
UBE2N-205ENST00000550657 IPO8O15397 1037 aaKnown RBP11.65□□□□□ -0.54
UBE2N-205ENST00000550657 TSPYL6Q8N831 410 aa11.65□□□□□ -0.54
UBE2N-205ENST00000550657 LNPKQ9C0E8 428 aa11.65□□□□□ -0.54
UBE2N-205ENST00000550657 RIMS2Q9UQ26 1411 aa11.65□□□□□ -0.54
UBE2N-205ENST00000550657 COL3A1P02461 1466 aaPredicted RBP11.65□□□□□ -0.54
UBE2N-205ENST00000550657 DCTN1Q14203 1278 aa11.65□□□□□ -0.55
UBE2N-205ENST00000550657 NLRP1Q9C000 1473 aa11.64□□□□□ -0.55
UBE2N-205ENST00000550657 FAM83GA6ND36 823 aa11.64□□□□□ -0.55
UBE2N-205ENST00000550657 WASLO00401 505 aaPredicted RBP11.64□□□□□ -0.55
UBE2N-205ENST00000550657 NUDT16Q96DE0 195 aaKnown RBP11.64□□□□□ -0.55
UBE2N-205ENST00000550657 ARHGEF40Q8TER5 1519 aa11.64□□□□□ -0.55
UBE2N-205ENST00000550657 NFE2L2Q16236 605 aa11.63□□□□□ -0.55
UBE2N-205ENST00000550657 COG3Q96JB2 828 aa11.63□□□□□ -0.55
UBE2N-205ENST00000550657 TBC1D32Q96NH3 1257 aa11.63□□□□□ -0.55
UBE2N-205ENST00000550657 IL16Q14005 1332 aa11.63□□□□□ -0.55
UBE2N-205ENST00000550657 KIF16BQ96L93 1317 aa11.63□□□□□ -0.55
UBE2N-205ENST00000550657 NCBP3Q53F19 620 aaKnown RBP11.63□□□□□ -0.55
UBE2N-205ENST00000550657 METP08581 1390 aa11.63□□□□□ -0.55
UBE2N-205ENST00000550657 ZBTB40Q9NUA8 1239 aa11.62□□□□□ -0.55
UBE2N-205ENST00000550657 TBC1D2Q9BYX2 928 aa11.62□□□□□ -0.55
UBE2N-205ENST00000550657 BRPF3Q9ULD4 1205 aa11.62□□□□□ -0.55
UBE2N-205ENST00000550657 PNPLA6Q8IY17 1366 aa11.62□□□□□ -0.55
UBE2N-205ENST00000550657 PPIP5K1Q6PFW1 1433 aa11.62□□□□□ -0.55
UBE2N-205ENST00000550657 ADGRB2O60241 1585 aa11.62□□□□□ -0.55
UBE2N-205ENST00000550657 HDAC1Q13547 482 aaPredicted RBP11.62□□□□□ -0.55
UBE2N-205ENST00000550657 ARXQ96QS3 562 aa11.61□□□□□ -0.55
UBE2N-205ENST00000550657 MBIPQ9NS73 344 aa11.61□□□□□ -0.55
UBE2N-205ENST00000550657 A2ML1A8K2U0 1454 aa11.61□□□□□ -0.55
UBE2N-205ENST00000550657 IL13P35225 146 aa11.61□□□□□ -0.55
UBE2N-205ENST00000550657 C22orf23Q9BZE7 217 aa11.61□□□□□ -0.55
UBE2N-205ENST00000550657 ANKRD45Q5TZF3 282 aa11.6□□□□□ -0.55
UBE2N-205ENST00000550657 VAMP4O75379 141 aa11.6□□□□□ -0.55
UBE2N-205ENST00000550657 CCDC61Q9Y6R9 512 aa11.6□□□□□ -0.55
UBE2N-205ENST00000550657 TWISTNBQ3B726 338 aaPredicted RBP11.59□□□□□ -0.55
UBE2N-205ENST00000550657 ALDH1L2Q3SY69 923 aa11.59□□□□□ -0.55
UBE2N-205ENST00000550657 AEBP1Q8IUX7 1158 aa11.59□□□□□ -0.55
UBE2N-205ENST00000550657 C8orf58Q8NAV2 365 aa11.59□□□□□ -0.55
UBE2N-205ENST00000550657 GNAI1P63096 354 aa11.59□□□□□ -0.55
UBE2N-205ENST00000550657 LRRC7Q96NW7 1537 aa11.59□□□□□ -0.55
UBE2N-205ENST00000550657 REREQ9P2R6 1566 aa11.58□□□□□ -0.56
UBE2N-205ENST00000550657 SMC5Q8IY18 1101 aa11.58□□□□□ -0.56
UBE2N-205ENST00000550657 MRPL50Q8N5N7 158 aaKnown RBP11.58□□□□□ -0.56
UBE2N-205ENST00000550657 MED14O60244 1454 aa11.58□□□□□ -0.56
UBE2N-205ENST00000550657 CLTCQ00610 1675 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms