RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 CPSF1Q10570 1443 aaKnown RBP19.34■□□□□ 0.69
CACNB3-216ENST00000550391 TERF2IPQ9NYB0 399 aa19.34■□□□□ 0.69
CACNB3-216ENST00000550391 MST1RQ04912 1400 aa19.34■□□□□ 0.69
CACNB3-216ENST00000550391 ATF3P18847 181 aa19.33■□□□□ 0.68
CACNB3-216ENST00000550391 HDGFL2Q7Z4V5 671 aaPredicted RBP19.33■□□□□ 0.68
CACNB3-216ENST00000550391 C8orf37Q96NL8 207 aa19.33■□□□□ 0.68
CACNB3-216ENST00000550391 MON2Q7Z3U7 1717 aa19.32■□□□□ 0.68
CACNB3-216ENST00000550391 C1orf167Q5SNV9 1468 aa19.32■□□□□ 0.68
CACNB3-216ENST00000550391 ANP32CO43423 234 aa19.31■□□□□ 0.68
CACNB3-216ENST00000550391 KNSTRNQ9Y448 316 aa19.31■□□□□ 0.68
CACNB3-216ENST00000550391 NSD3Q9BZ95 1437 aa19.31■□□□□ 0.68
CACNB3-216ENST00000550391 POLR3AO14802 1390 aaPredicted RBP19.31■□□□□ 0.68
CACNB3-216ENST00000550391 ACEP12821 1306 aa19.29■□□□□ 0.68
CACNB3-216ENST00000550391 LRRC59Q96AG4 307 aaKnown RBP19.29■□□□□ 0.68
CACNB3-216ENST00000550391 ZNF692Q9BU19 519 aaPredicted RBP19.29■□□□□ 0.68
CACNB3-216ENST00000550391 KTN1Q86UP2 1357 aaKnown RBP19.29■□□□□ 0.68
CACNB3-216ENST00000550391 EP400Q96L91 3159 aa19.28■□□□□ 0.68
CACNB3-216ENST00000550391 KIF1AQ12756 1690 aa19.28■□□□□ 0.68
CACNB3-216ENST00000550391 AMER1Q5JTC6 1135 aaPredicted RBP19.28■□□□□ 0.68
CACNB3-216ENST00000550391 PMFBP1Q8TBY8 1022 aa19.28■□□□□ 0.68
CACNB3-216ENST00000550391 PHF8Q9UPP1 1060 aa19.28■□□□□ 0.68
CACNB3-216ENST00000550391 NPC1L1Q9UHC9 1359 aa19.28■□□□□ 0.68
CACNB3-216ENST00000550391 NRKQ7Z2Y5 1582 aa19.27■□□□□ 0.68
CACNB3-216ENST00000550391 ESCO1Q5FWF5 840 aa19.27■□□□□ 0.68
CACNB3-216ENST00000550391 BRINP3Q76B58 766 aa19.27■□□□□ 0.68
CACNB3-216ENST00000550391 EDC4Q6P2E9 1401 aaKnown RBP19.26■□□□□ 0.67
CACNB3-216ENST00000550391 LRP5O75197 1615 aa19.26■□□□□ 0.67
CACNB3-216ENST00000550391 MIER1Q8N108 512 aa19.26■□□□□ 0.67
CACNB3-216ENST00000550391 ORAI2Q96SN7 254 aa19.26■□□□□ 0.67
CACNB3-216ENST00000550391 USP6P35125 1406 aa19.25■□□□□ 0.67
CACNB3-216ENST00000550391 NGDNQ8NEJ9 315 aaKnown RBP19.25■□□□□ 0.67
CACNB3-216ENST00000550391 PRKRIP1Q9H875 184 aaPredicted RBP19.25■□□□□ 0.67
CACNB3-216ENST00000550391 TRPC5Q9UL62 973 aaPredicted RBP19.25■□□□□ 0.67
CACNB3-216ENST00000550391 NHSL1Q5SYE7 1610 aa19.24■□□□□ 0.67
CACNB3-216ENST00000550391 SSH2Q76I76 1423 aa19.24■□□□□ 0.67
CACNB3-216ENST00000550391 CGNL1Q0VF96 1302 aa19.24■□□□□ 0.67
CACNB3-216ENST00000550391 KIF20BQ96Q89 1820 aa19.23■□□□□ 0.67
CACNB3-216ENST00000550391 CC2D1BQ5T0F9 858 aaKnown RBP19.23■□□□□ 0.67
CACNB3-216ENST00000550391 NSD2O96028 1365 aa19.21■□□□□ 0.67
CACNB3-216ENST00000550391 PARD3Q8TEW0 1356 aa19.21■□□□□ 0.67
CACNB3-216ENST00000550391 ANKRD26Q9UPS8 1709 aa19.21■□□□□ 0.67
CACNB3-216ENST00000550391 CNGB1Q14028 1251 aaPredicted RBP19.2■□□□□ 0.66
CACNB3-216ENST00000550391 RALBP1Q15311 655 aa19.2■□□□□ 0.66
CACNB3-216ENST00000550391 USP21Q9UK80 565 aa19.2■□□□□ 0.66
CACNB3-216ENST00000550391 TTC21BQ7Z4L5 1316 aa19.2■□□□□ 0.66
CACNB3-216ENST00000550391 BRD4O60885 1362 aaPredicted RBP19.19■□□□□ 0.66
CACNB3-216ENST00000550391 FYB1O15117 783 aa19.19■□□□□ 0.66
CACNB3-216ENST00000550391 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.18■□□□□ 0.66
CACNB3-216ENST00000550391 FOXO3O43524 673 aa19.17■□□□□ 0.66
CACNB3-216ENST00000550391 TTC21AQ8NDW8 1320 aa19.17■□□□□ 0.66
CACNB3-216ENST00000550391 PNPLA6Q8IY17 1366 aa19.17■□□□□ 0.66
CACNB3-216ENST00000550391 TRPM3Q9HCF6 1732 aaPredicted RBP19.17■□□□□ 0.66
CACNB3-216ENST00000550391 PSME1Q06323 249 aa19.16■□□□□ 0.66
CACNB3-216ENST00000550391 GGNBP2Q9H3C7 697 aa19.16■□□□□ 0.66
CACNB3-216ENST00000550391 ADAMTS2O95450 1211 aa19.15■□□□□ 0.66
CACNB3-216ENST00000550391 NME9Q86XW9 330 aa19.15■□□□□ 0.66
CACNB3-216ENST00000550391 BLMP54132 1417 aaPredicted RBP19.15■□□□□ 0.66
CACNB3-216ENST00000550391 PIK3C2AO00443 1686 aa19.14■□□□□ 0.66
CACNB3-216ENST00000550391 FNBP4Q8N3X1 1017 aaPredicted RBP19.14■□□□□ 0.65
CACNB3-216ENST00000550391 NPHP3Q7Z494 1330 aa19.14■□□□□ 0.65
CACNB3-216ENST00000550391 CCER2I3L3R5 266 aa19.13■□□□□ 0.65
CACNB3-216ENST00000550391 KRT28Q7Z3Y7 464 aa19.13■□□□□ 0.65
CACNB3-216ENST00000550391 MORC1Q86VD1 984 aa19.13■□□□□ 0.65
CACNB3-216ENST00000550391 MYBBP1AQ9BQG0 1328 aaKnown RBP19.13■□□□□ 0.65
CACNB3-216ENST00000550391 USP54Q70EL1 1684 aa19.13■□□□□ 0.65
CACNB3-216ENST00000550391 PXDNQ92626 1479 aa19.12■□□□□ 0.65
CACNB3-216ENST00000550391 OVOS2A0A0J9YW53 1432 aa19.11■□□□□ 0.65
CACNB3-216ENST00000550391 ATRNO75882 1429 aa19.11■□□□□ 0.65
CACNB3-216ENST00000550391 OVOS2Q6IE36 1432 aa19.11■□□□□ 0.65
CACNB3-216ENST00000550391 USP31Q70CQ4 1352 aa19.11■□□□□ 0.65
CACNB3-216ENST00000550391 XPCQ01831 940 aaPredicted RBP19.11■□□□□ 0.65
CACNB3-216ENST00000550391 SF3B2Q13435 895 aaKnown RBP19.11■□□□□ 0.65
CACNB3-216ENST00000550391 DDX17Q92841 729 aaKnown RBP19.11■□□□□ 0.65
CACNB3-216ENST00000550391 MARF1Q9Y4F3 1742 aaKnown RBP19.1■□□□□ 0.65
CACNB3-216ENST00000550391 ALS2Q96Q42 1657 aa19.1■□□□□ 0.65
CACNB3-216ENST00000550391 SBNO1A3KN83 1393 aa19.09■□□□□ 0.65
CACNB3-216ENST00000550391 PAK3O75914 559 aaPredicted RBP19.09■□□□□ 0.65
CACNB3-216ENST00000550391 YY1P25490 414 aa19.09■□□□□ 0.65
CACNB3-216ENST00000550391 PPP2R1AP30153 589 aa19.09■□□□□ 0.65
CACNB3-216ENST00000550391 IFFO2Q5TF58 517 aa19.09■□□□□ 0.65
CACNB3-216ENST00000550391 COG3Q96JB2 828 aa19.09■□□□□ 0.65
CACNB3-216ENST00000550391 SOS2Q07890 1332 aaPredicted RBP19.07■□□□□ 0.64
CACNB3-216ENST00000550391 NLRP13Q86W25 1043 aa19.07■□□□□ 0.64
CACNB3-216ENST00000550391 ABTB2Q8N961 1025 aa19.07■□□□□ 0.64
CACNB3-216ENST00000550391 TNNT2P45379 298 aaPredicted RBP19.05■□□□□ 0.64
CACNB3-216ENST00000550391 NLRP6P59044 892 aa19.05■□□□□ 0.64
CACNB3-216ENST00000550391 CCDC184Q52MB2 194 aa19.05■□□□□ 0.64
CACNB3-216ENST00000550391 DEFB132Q7Z7B7 95 aa19.05■□□□□ 0.64
CACNB3-216ENST00000550391 TNS3Q68CZ2 1445 aa19.05■□□□□ 0.64
CACNB3-216ENST00000550391 AATKQ6ZMQ8 1374 aa19.04■□□□□ 0.64
CACNB3-216ENST00000550391 SPATA31A3Q5VYP0 1347 aa19.03■□□□□ 0.64
CACNB3-216ENST00000550391 NUTM2GQ5VZR2 741 aa19.03■□□□□ 0.64
CACNB3-216ENST00000550391 GJD4Q96KN9 370 aaPredicted RBP19.03■□□□□ 0.64
CACNB3-216ENST00000550391 MAP2P11137 1827 aaKnown RBP19.02■□□□□ 0.63
CACNB3-216ENST00000550391 MRS2Q9HD23 443 aa19.01■□□□□ 0.63
CACNB3-216ENST00000550391 SLIT3O75094 1523 aa19■□□□□ 0.63
CACNB3-216ENST00000550391 ARHGEF10O15013 1369 aa19■□□□□ 0.63
CACNB3-216ENST00000550391 COL22A1Q8NFW1 1626 aaPredicted RBP19■□□□□ 0.63
CACNB3-216ENST00000550391 SMG6Q86US8 1419 aaKnown RBP19■□□□□ 0.63
CACNB3-216ENST00000550391 USP19O94966 1318 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms