RNA–Protein interactions for RNA: ENST00000545675.5

SEPHS1-206, Transcript of selenophosphate synthetase 1, humanhuman

TSL 1 (best) BASIC

Gene SEPHS1, Length 2,988 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEPHS1-206ENST00000545675 U2AF1Q01081 240 aaKnown RBP eCLIP23.45■■□□□ 1.34
SEPHS1-206ENST00000545675 CABP2Q9NPB3 220 aa23.45■■□□□ 1.34
SEPHS1-206ENST00000545675 ABCC3O15438 1527 aa23.44■■□□□ 1.34
SEPHS1-206ENST00000545675 GLI2P10070 1586 aa23.44■■□□□ 1.34
SEPHS1-206ENST00000545675 ANKRD36BQ8N2N9 1353 aa23.44■■□□□ 1.34
SEPHS1-206ENST00000545675 HECW2Q9P2P5 1572 aa23.44■■□□□ 1.34
SEPHS1-206ENST00000545675 SAFB2Q14151 953 aaKnown RBP eCLIP23.43■■□□□ 1.34
SEPHS1-206ENST00000545675 VIRMAQ69YN4 1812 aaKnown RBP23.43■■□□□ 1.34
SEPHS1-206ENST00000545675 HSCBQ8IWL3 235 aa23.43■■□□□ 1.34
SEPHS1-206ENST00000545675 TULP4Q9NRJ4 1543 aa23.43■■□□□ 1.34
SEPHS1-206ENST00000545675 VGFO15240 615 aaPredicted RBP23.43■■□□□ 1.34
SEPHS1-206ENST00000545675 FTSJ3Q8IY81 847 aaKnown RBP23.42■■□□□ 1.34
SEPHS1-206ENST00000545675 ZBTB7CA1YPR0 619 aa23.42■■□□□ 1.34
SEPHS1-206ENST00000545675 TSR2Q969E8 191 aaKnown RBP23.41■■□□□ 1.34
SEPHS1-206ENST00000545675 PUS7Q96PZ0 661 aaKnown RBP23.41■■□□□ 1.34
SEPHS1-206ENST00000545675 RWDD1Q9H446 243 aaPredicted RBP23.41■■□□□ 1.34
SEPHS1-206ENST00000545675 AAMPQ13685 434 aa23.4■■□□□ 1.34
SEPHS1-206ENST00000545675 NSD2O96028 1365 aa23.39■■□□□ 1.34
SEPHS1-206ENST00000545675 ARHGEF28Q8N1W1 1705 aaKnown RBP23.39■■□□□ 1.33
SEPHS1-206ENST00000545675 SIGLEC1Q9BZZ2 1709 aa23.39■■□□□ 1.33
SEPHS1-206ENST00000545675 RAPGEF3O95398 923 aa23.38■■□□□ 1.33
SEPHS1-206ENST00000545675 TNPO1Q92973 898 aaKnown RBP23.38■■□□□ 1.33
SEPHS1-206ENST00000545675 ITPRIPQ8IWB1 547 aa23.37■■□□□ 1.33
SEPHS1-206ENST00000545675 CAMSAP1Q5T5Y3 1602 aa23.37■■□□□ 1.33
SEPHS1-206ENST00000545675 HSP90AB1P08238 724 aaKnown RBP23.37■■□□□ 1.33
SEPHS1-206ENST00000545675 CFAP74Q9C0B2 1584 aa23.36■■□□□ 1.33
SEPHS1-206ENST00000545675 NEXMIFQ5QGS0 1516 aa23.36■■□□□ 1.33
SEPHS1-206ENST00000545675 STK26Q9P289 416 aa23.36■■□□□ 1.33
SEPHS1-206ENST00000545675 IDI1Q13907 227 aa23.34■■□□□ 1.33
SEPHS1-206ENST00000545675 NCBP3Q53F19 620 aaKnown RBP23.34■■□□□ 1.33
SEPHS1-206ENST00000545675 RBM42Q9BTD8 480 aaKnown RBP23.34■■□□□ 1.33
SEPHS1-206ENST00000545675 LNPKQ9C0E8 428 aa23.34■■□□□ 1.33
SEPHS1-206ENST00000545675 GGNBP2Q9H3C7 697 aa23.34■■□□□ 1.33
SEPHS1-206ENST00000545675 A0A1W2PP64 1363 aa23.34■■□□□ 1.33
SEPHS1-206ENST00000545675 U2SURPO15042 1029 aaKnown RBP23.34■■□□□ 1.33
SEPHS1-206ENST00000545675 SRPK2P78362 688 aaKnown RBP23.34■■□□□ 1.33
SEPHS1-206ENST00000545675 MVPQ14764 893 aaKnown RBP23.34■■□□□ 1.33
SEPHS1-206ENST00000545675 KIAA1211Q6ZU35 1233 aa23.34■■□□□ 1.33
SEPHS1-206ENST00000545675 PIK3C2BO00750 1634 aa23.33■■□□□ 1.33
SEPHS1-206ENST00000545675 NCLP19338 710 aaKnown RBP23.32■■□□□ 1.32
SEPHS1-206ENST00000545675 ZKSCAN2Q63HK3 967 aa23.32■■□□□ 1.32
SEPHS1-206ENST00000545675 ADGRB2O60241 1585 aa23.32■■□□□ 1.32
SEPHS1-206ENST00000545675 CD2BP2O95400 341 aaKnown RBP23.31■■□□□ 1.32
SEPHS1-206ENST00000545675 ABCC11Q96J66 1382 aa23.31■■□□□ 1.32
SEPHS1-206ENST00000545675 PLEKHF1Q96S99 279 aa23.31■■□□□ 1.32
SEPHS1-206ENST00000545675 SMC4Q9NTJ3 1288 aa23.31■■□□□ 1.32
SEPHS1-206ENST00000545675 DDX11L8A8MPP1 907 aa23.3■■□□□ 1.32
SEPHS1-206ENST00000545675 DZIP1LQ8IYY4 767 aaKnown RBP23.3■■□□□ 1.32
SEPHS1-206ENST00000545675 ZNF692Q9BU19 519 aaPredicted RBP23.3■■□□□ 1.32
SEPHS1-206ENST00000545675 EXOSC9Q06265 439 aaKnown RBP23.29■■□□□ 1.32
SEPHS1-206ENST00000545675 TMPOP42166 694 aaKnown RBP23.29■■□□□ 1.32
SEPHS1-206ENST00000545675 TRIM35Q9UPQ4 493 aa23.28■■□□□ 1.32
SEPHS1-206ENST00000545675 CT47B1P0C2W7 299 aaPredicted RBP23.27■■□□□ 1.32
SEPHS1-206ENST00000545675 FAM13BQ9NYF5 915 aa23.27■■□□□ 1.32
SEPHS1-206ENST00000545675 ZMYM3Q14202 1370 aa23.26■■□□□ 1.31
SEPHS1-206ENST00000545675 MINK1Q8N4C8 1332 aaPredicted RBP23.26■■□□□ 1.31
SEPHS1-206ENST00000545675 SSFA2P28290 1259 aa23.26■■□□□ 1.31
SEPHS1-206ENST00000545675 CYB5RLQ6IPT4 315 aa23.26■■□□□ 1.31
SEPHS1-206ENST00000545675 FYB1O15117 783 aa23.26■■□□□ 1.31
SEPHS1-206ENST00000545675 TRIM27P14373 513 aa23.25■■□□□ 1.31
SEPHS1-206ENST00000545675 SSH1Q8WYL5 1049 aa23.25■■□□□ 1.31
SEPHS1-206ENST00000545675 SLC52A1Q9NWF4 448 aa23.24■■□□□ 1.31
SEPHS1-206ENST00000545675 ARHGAP31Q2M1Z3 1444 aa23.24■■□□□ 1.31
SEPHS1-206ENST00000545675 PRAM1Q96QH2 718 aa23.24■■□□□ 1.31
SEPHS1-206ENST00000545675 DIP2CQ9Y2E4 1556 aa23.23■■□□□ 1.31
SEPHS1-206ENST00000545675 C1orf115Q9H7X2 142 aa23.23■■□□□ 1.31
SEPHS1-206ENST00000545675 COL3A1P02461 1466 aaPredicted RBP23.23■■□□□ 1.31
SEPHS1-206ENST00000545675 ZFYVE9O95405 1425 aa23.23■■□□□ 1.31
SEPHS1-206ENST00000545675 TERF2IPQ9NYB0 399 aa23.23■■□□□ 1.31
SEPHS1-206ENST00000545675 R3HCC1Q9Y3T6 440 aaKnown RBP23.22■■□□□ 1.31
SEPHS1-206ENST00000545675 NASPP49321 788 aaPredicted RBP23.22■■□□□ 1.31
SEPHS1-206ENST00000545675 NEO1Q92859 1461 aa23.21■■□□□ 1.31
SEPHS1-206ENST00000545675 ATAD2Q6PL18 1390 aa23.21■■□□□ 1.31
SEPHS1-206ENST00000545675 RIPK4P57078 832 aa23.21■■□□□ 1.31
SEPHS1-206ENST00000545675 CHAMP1Q96JM3 812 aa23.21■■□□□ 1.31
SEPHS1-206ENST00000545675 PTPRMP28827 1452 aa23.21■■□□□ 1.31
SEPHS1-206ENST00000545675 ATF7IPQ6VMQ6 1270 aa23.2■■□□□ 1.3
SEPHS1-206ENST00000545675 DDX49Q9Y6V7 483 aaKnown RBP23.2■■□□□ 1.3
SEPHS1-206ENST00000545675 GBP4Q96PP9 640 aa23.2■■□□□ 1.3
SEPHS1-206ENST00000545675 NOB1Q9ULX3 412 aaKnown RBP23.19■■□□□ 1.3
SEPHS1-206ENST00000545675 CD163L1Q9NR16 1453 aa23.19■■□□□ 1.3
SEPHS1-206ENST00000545675 TMEM57Q8N5G2 664 aa23.19■■□□□ 1.3
SEPHS1-206ENST00000545675 DDX19BQ9UMR2 479 aa23.19■■□□□ 1.3
SEPHS1-206ENST00000545675 MYO5BQ9ULV0 1848 aa23.18■■□□□ 1.3
SEPHS1-206ENST00000545675 DIAPH1O60610 1272 aaKnown RBP23.18■■□□□ 1.3
SEPHS1-206ENST00000545675 FOXD4L5Q5VV16 416 aaPredicted RBP23.18■■□□□ 1.3
SEPHS1-206ENST00000545675 FOXD4L4Q8WXT5 416 aaPredicted RBP23.18■■□□□ 1.3
SEPHS1-206ENST00000545675 XPCQ01831 940 aaPredicted RBP23.17■■□□□ 1.3
SEPHS1-206ENST00000545675 HDAC1Q13547 482 aaPredicted RBP23.17■■□□□ 1.3
SEPHS1-206ENST00000545675 IL16Q14005 1332 aa23.17■■□□□ 1.3
SEPHS1-206ENST00000545675 YTHDC2Q9H6S0 1430 aaKnown RBP23.16■■□□□ 1.3
SEPHS1-206ENST00000545675 YEATS2Q9ULM3 1422 aa23.16■■□□□ 1.3
SEPHS1-206ENST00000545675 MSNP26038 577 aaKnown RBP23.16■■□□□ 1.3
SEPHS1-206ENST00000545675 MPNDQ8N594 471 aa23.16■■□□□ 1.3
SEPHS1-206ENST00000545675 GAS2L2Q8NHY3 880 aa23.16■■□□□ 1.3
SEPHS1-206ENST00000545675 PRDM4Q9UKN5 801 aa23.16■■□□□ 1.3
SEPHS1-206ENST00000545675 FGD1P98174 961 aa23.15■■□□□ 1.3
SEPHS1-206ENST00000545675 ANKRD45Q5TZF3 282 aa23.15■■□□□ 1.3
SEPHS1-206ENST00000545675 PDCL3Q9H2J4 239 aa23.15■■□□□ 1.3
SEPHS1-206ENST00000545675 CAVIN1Q6NZI2 390 aaKnown RBP23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms