RNA–Protein interactions for RNA: ENST00000545368.5

CDCA3-210, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 619 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-210ENST00000545368 SOS2Q07890 1332 aaPredicted RBP17.86■□□□□ 0.45
CDCA3-210ENST00000545368 SBNO1A3KN83 1393 aa17.85■□□□□ 0.45
CDCA3-210ENST00000545368 PAK3O75914 559 aaPredicted RBP17.85■□□□□ 0.45
CDCA3-210ENST00000545368 COL16A1Q07092 1604 aaPredicted RBP17.85■□□□□ 0.45
CDCA3-210ENST00000545368 KIF20BQ96Q89 1820 aa17.84■□□□□ 0.45
CDCA3-210ENST00000545368 TNS3Q68CZ2 1445 aa17.84■□□□□ 0.45
CDCA3-210ENST00000545368 SSH2Q76I76 1423 aa17.84■□□□□ 0.45
CDCA3-210ENST00000545368 TTC21AQ8NDW8 1320 aa17.84■□□□□ 0.45
CDCA3-210ENST00000545368 KNSTRNQ9Y448 316 aa17.84■□□□□ 0.45
CDCA3-210ENST00000545368 TTC21BQ7Z4L5 1316 aa17.83■□□□□ 0.44
CDCA3-210ENST00000545368 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.83■□□□□ 0.44
CDCA3-210ENST00000545368 FBXO41Q8TF61 875 aa17.83■□□□□ 0.44
CDCA3-210ENST00000545368 CARD14Q9BXL6 1004 aa17.83■□□□□ 0.44
CDCA3-210ENST00000545368 ALS2Q96Q42 1657 aa17.83■□□□□ 0.44
CDCA3-210ENST00000545368 CGNL1Q0VF96 1302 aa17.82■□□□□ 0.44
CDCA3-210ENST00000545368 ARHGEF10O15013 1369 aa17.81■□□□□ 0.44
CDCA3-210ENST00000545368 PIK3C2AO00443 1686 aa17.81■□□□□ 0.44
CDCA3-210ENST00000545368 LRRC59Q96AG4 307 aaKnown RBP17.81■□□□□ 0.44
CDCA3-210ENST00000545368 SPATA31A3Q5VYP0 1347 aa17.8■□□□□ 0.44
CDCA3-210ENST00000545368 LMOD2Q6P5Q4 547 aa17.8■□□□□ 0.44
CDCA3-210ENST00000545368 ABTB2Q8N961 1025 aa17.79■□□□□ 0.44
CDCA3-210ENST00000545368 ANKRD26Q9UPS8 1709 aa17.78■□□□□ 0.44
CDCA3-210ENST00000545368 USP54Q70EL1 1684 aa17.78■□□□□ 0.44
CDCA3-210ENST00000545368 NSD2O96028 1365 aa17.78■□□□□ 0.44
CDCA3-210ENST00000545368 PER1O15534 1290 aaPredicted RBP17.77■□□□□ 0.44
CDCA3-210ENST00000545368 SHPRHQ149N8 1683 aa17.77■□□□□ 0.43
CDCA3-210ENST00000545368 MED1Q15648 1581 aaPredicted RBP17.76■□□□□ 0.43
CDCA3-210ENST00000545368 HSPA1LP34931 641 aa17.76■□□□□ 0.43
CDCA3-210ENST00000545368 NME9Q86XW9 330 aa17.76■□□□□ 0.43
CDCA3-210ENST00000545368 COL22A1Q8NFW1 1626 aaPredicted RBP17.76■□□□□ 0.43
CDCA3-210ENST00000545368 NLRP6P59044 892 aa17.75■□□□□ 0.43
CDCA3-210ENST00000545368 NLRP13Q86W25 1043 aa17.75■□□□□ 0.43
CDCA3-210ENST00000545368 USP31Q70CQ4 1352 aa17.75■□□□□ 0.43
CDCA3-210ENST00000545368 FYB1O15117 783 aa17.74■□□□□ 0.43
CDCA3-210ENST00000545368 AMER1Q5JTC6 1135 aaPredicted RBP17.74■□□□□ 0.43
CDCA3-210ENST00000545368 NUTM2GQ5VZR2 741 aa17.74■□□□□ 0.43
CDCA3-210ENST00000545368 COG3Q96JB2 828 aa17.74■□□□□ 0.43
CDCA3-210ENST00000545368 GGNBP2Q9H3C7 697 aa17.74■□□□□ 0.43
CDCA3-210ENST00000545368 PNPLA6Q8IY17 1366 aa17.74■□□□□ 0.43
CDCA3-210ENST00000545368 JCADQ9P266 1359 aa17.74■□□□□ 0.43
CDCA3-210ENST00000545368 NPC1L1Q9UHC9 1359 aa17.74■□□□□ 0.43
CDCA3-210ENST00000545368 OVOS2A0A0J9YW53 1432 aa17.73■□□□□ 0.43
CDCA3-210ENST00000545368 OVOS2Q6IE36 1432 aa17.73■□□□□ 0.43
CDCA3-210ENST00000545368 PHRF1Q9P1Y6 1649 aaKnown RBP17.73■□□□□ 0.43
CDCA3-210ENST00000545368 MARF1Q9Y4F3 1742 aaKnown RBP17.73■□□□□ 0.43
CDCA3-210ENST00000545368 ABCA3Q99758 1704 aa17.72■□□□□ 0.43
CDCA3-210ENST00000545368 CRYBG1Q9Y4K1 1723 aa17.72■□□□□ 0.43
CDCA3-210ENST00000545368 CC2D1BQ5T0F9 858 aaKnown RBP17.71■□□□□ 0.43
CDCA3-210ENST00000545368 SLIT3O75094 1523 aa17.71■□□□□ 0.43
CDCA3-210ENST00000545368 USP19O94966 1318 aa17.71■□□□□ 0.42
CDCA3-210ENST00000545368 PLEKHG5O94827 1062 aa17.7■□□□□ 0.42
CDCA3-210ENST00000545368 HAP1P54257 671 aaPredicted RBP17.7■□□□□ 0.42
CDCA3-210ENST00000545368 CNGB1Q14028 1251 aaPredicted RBP17.7■□□□□ 0.42
CDCA3-210ENST00000545368 MORC1Q86VD1 984 aa17.7■□□□□ 0.42
CDCA3-210ENST00000545368 ZRANB1Q9UGI0 708 aa17.7■□□□□ 0.42
CDCA3-210ENST00000545368 KCNH5Q8NCM2 988 aa17.69■□□□□ 0.42
CDCA3-210ENST00000545368 SPATA31A6Q5VVP1 1343 aa17.67■□□□□ 0.42
CDCA3-210ENST00000545368 CABLES1Q8TDN4 633 aa17.66■□□□□ 0.42
CDCA3-210ENST00000545368 SOX12O15370 315 aa17.65■□□□□ 0.42
CDCA3-210ENST00000545368 GCP02774 474 aa17.65■□□□□ 0.42
CDCA3-210ENST00000545368 NFAT5O94916 1531 aa17.65■□□□□ 0.42
CDCA3-210ENST00000545368 ANP32CO43423 234 aa17.64■□□□□ 0.41
CDCA3-210ENST00000545368 DIEXFQ68CQ4 756 aaKnown RBP17.64■□□□□ 0.41
CDCA3-210ENST00000545368 PARD3Q8TEW0 1356 aa17.64■□□□□ 0.41
CDCA3-210ENST00000545368 LTN1O94822 1766 aa17.63■□□□□ 0.41
CDCA3-210ENST00000545368 TNNT2P45379 298 aaPredicted RBP17.63■□□□□ 0.41
CDCA3-210ENST00000545368 RALBP1Q15311 655 aa17.63■□□□□ 0.41
CDCA3-210ENST00000545368 AATKQ6ZMQ8 1374 aa17.63■□□□□ 0.41
CDCA3-210ENST00000545368 NUTM2BA6NNL0 878 aaPredicted RBP17.62■□□□□ 0.41
CDCA3-210ENST00000545368 NUTM2EB1AL46 878 aaPredicted RBP17.62■□□□□ 0.41
CDCA3-210ENST00000545368 NUTM2AQ8IVF1 878 aaPredicted RBP17.62■□□□□ 0.41
CDCA3-210ENST00000545368 MAP2P11137 1827 aaKnown RBP17.62■□□□□ 0.41
CDCA3-210ENST00000545368 ZC3H6P61129 1189 aaKnown RBP17.6■□□□□ 0.41
CDCA3-210ENST00000545368 PRKRIP1Q9H875 184 aaPredicted RBP17.6■□□□□ 0.41
CDCA3-210ENST00000545368 CPDO75976 1380 aa17.6■□□□□ 0.41
CDCA3-210ENST00000545368 KIAA0232Q92628 1395 aa17.59■□□□□ 0.41
CDCA3-210ENST00000545368 ZBTB7CA1YPR0 619 aa17.59■□□□□ 0.41
CDCA3-210ENST00000545368 ABCC6O95255 1503 aa17.58■□□□□ 0.41
CDCA3-210ENST00000545368 PRDM11Q9NQV5 511 aa17.58■□□□□ 0.4
CDCA3-210ENST00000545368 COL14A1Q05707 1796 aaKnown RBP17.58■□□□□ 0.4
CDCA3-210ENST00000545368 LRP6O75581 1613 aa17.58■□□□□ 0.4
CDCA3-210ENST00000545368 RTL1A6NKG5 1358 aa17.57■□□□□ 0.4
CDCA3-210ENST00000545368 MAP3K19Q56UN5 1328 aa17.57■□□□□ 0.4
CDCA3-210ENST00000545368 MYBBP1AQ9BQG0 1328 aaKnown RBP17.57■□□□□ 0.4
CDCA3-210ENST00000545368 ADAMTS2O95450 1211 aa17.57■□□□□ 0.4
CDCA3-210ENST00000545368 RRS1Q15050 365 aaKnown RBP17.57■□□□□ 0.4
CDCA3-210ENST00000545368 MEX3CQ5U5Q3 659 aaKnown RBP17.57■□□□□ 0.4
CDCA3-210ENST00000545368 SMG6Q86US8 1419 aaKnown RBP17.56■□□□□ 0.4
CDCA3-210ENST00000545368 KIF24Q5T7B8 1368 aa17.56■□□□□ 0.4
CDCA3-210ENST00000545368 FBLN1P23142 703 aa17.56■□□□□ 0.4
CDCA3-210ENST00000545368 AMPHP49418 695 aa17.56■□□□□ 0.4
CDCA3-210ENST00000545368 ILDR1Q86SU0 546 aaPredicted RBP17.56■□□□□ 0.4
CDCA3-210ENST00000545368 ARHGEF25Q86VW2 580 aa17.56■□□□□ 0.4
CDCA3-210ENST00000545368 PPM1GO15355 546 aaPredicted RBP17.55■□□□□ 0.4
CDCA3-210ENST00000545368 PPP2R1AP30153 589 aa17.55■□□□□ 0.4
CDCA3-210ENST00000545368 POLKQ9UBT6 870 aa17.55■□□□□ 0.4
CDCA3-210ENST00000545368 EMILIN1Q9Y6C2 1016 aa17.55■□□□□ 0.4
CDCA3-210ENST00000545368 CDK12Q9NYV4 1490 aaPredicted RBP17.55■□□□□ 0.4
CDCA3-210ENST00000545368 PEAK1Q9H792 1746 aa17.55■□□□□ 0.4
CDCA3-210ENST00000545368 PLCH1Q4KWH8 1693 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms