RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 FCHSD2O94868 740 aa15.99■□□□□ 0.15
PAAF1-215ENST00000544909 HDGFP51858 240 aaKnown RBP15.99■□□□□ 0.15
PAAF1-215ENST00000544909 STAG3Q9UJ98 1225 aa15.99■□□□□ 0.15
PAAF1-215ENST00000544909 CPSF1Q10570 1443 aaKnown RBP15.99■□□□□ 0.15
PAAF1-215ENST00000544909 AATKQ6ZMQ8 1374 aa15.98■□□□□ 0.15
PAAF1-215ENST00000544909 CPS1P31327 1500 aa15.98■□□□□ 0.15
PAAF1-215ENST00000544909 NRXN3Q9Y4C0 1643 aa15.98■□□□□ 0.15
PAAF1-215ENST00000544909 TMPOP42166 694 aaKnown RBP15.98■□□□□ 0.15
PAAF1-215ENST00000544909 NUTM2DQ5VT03 806 aaPredicted RBP15.98■□□□□ 0.15
PAAF1-215ENST00000544909 CDK19Q9BWU1 502 aa15.98■□□□□ 0.15
PAAF1-215ENST00000544909 DIAPH1O60610 1272 aaKnown RBP15.97■□□□□ 0.15
PAAF1-215ENST00000544909 ZKSCAN2Q63HK3 967 aa15.97■□□□□ 0.15
PAAF1-215ENST00000544909 NPM2Q86SE8 214 aaKnown RBP15.97■□□□□ 0.15
PAAF1-215ENST00000544909 STK26Q9P289 416 aa15.97■□□□□ 0.15
PAAF1-215ENST00000544909 CDK12Q9NYV4 1490 aaPredicted RBP15.97■□□□□ 0.15
PAAF1-215ENST00000544909 MINK1Q8N4C8 1332 aaPredicted RBP15.97■□□□□ 0.15
PAAF1-215ENST00000544909 BRPF1P55201 1214 aaPredicted RBP15.96■□□□□ 0.15
PAAF1-215ENST00000544909 FBXO31Q5XUX0 539 aaPredicted RBP15.96■□□□□ 0.15
PAAF1-215ENST00000544909 CYB5RLQ6IPT4 315 aa15.96■□□□□ 0.15
PAAF1-215ENST00000544909 CALD1Q05682 793 aaKnown RBP15.96■□□□□ 0.14
PAAF1-215ENST00000544909 MVPQ14764 893 aaKnown RBP15.96■□□□□ 0.14
PAAF1-215ENST00000544909 RWDD1Q9H446 243 aaPredicted RBP15.96■□□□□ 0.14
PAAF1-215ENST00000544909 COG6Q9Y2V7 657 aa15.96■□□□□ 0.14
PAAF1-215ENST00000544909 KIF16BQ96L93 1317 aa15.95■□□□□ 0.14
PAAF1-215ENST00000544909 GGNBP2Q9H3C7 697 aa15.95■□□□□ 0.14
PAAF1-215ENST00000544909 RRP7AQ9Y3A4 280 aaKnown RBP15.95■□□□□ 0.14
PAAF1-215ENST00000544909 NEUROD2Q15784 382 aa15.94■□□□□ 0.14
PAAF1-215ENST00000544909 PANK1Q8TE04 598 aa15.94■□□□□ 0.14
PAAF1-215ENST00000544909 IGHDP01880 384 aa15.94■□□□□ 0.14
PAAF1-215ENST00000544909 ALDH1L2Q3SY69 923 aa15.94■□□□□ 0.14
PAAF1-215ENST00000544909 TRIM35Q9UPQ4 493 aa15.94■□□□□ 0.14
PAAF1-215ENST00000544909 MON2Q7Z3U7 1717 aa15.93■□□□□ 0.14
PAAF1-215ENST00000544909 NEFMP07197 916 aa15.93■□□□□ 0.14
PAAF1-215ENST00000544909 SAFB2Q14151 953 aaKnown RBP eCLIP15.93■□□□□ 0.14
PAAF1-215ENST00000544909 FRAT1Q92837 279 aaPredicted RBP15.93■□□□□ 0.14
PAAF1-215ENST00000544909 DAXXQ9UER7 740 aaPredicted RBP15.93■□□□□ 0.14
PAAF1-215ENST00000544909 DDX19BQ9UMR2 479 aa15.93■□□□□ 0.14
PAAF1-215ENST00000544909 LRRC7Q96NW7 1537 aa15.93■□□□□ 0.14
PAAF1-215ENST00000544909 DZIP1LQ8IYY4 767 aaKnown RBP15.92■□□□□ 0.14
PAAF1-215ENST00000544909 IPO8O15397 1037 aaKnown RBP15.91■□□□□ 0.14
PAAF1-215ENST00000544909 DEKP35659 375 aaKnown RBP15.91■□□□□ 0.14
PAAF1-215ENST00000544909 CHMP4BQ9H444 224 aaKnown RBP15.91■□□□□ 0.14
PAAF1-215ENST00000544909 CABP1Q9NZU7 370 aa15.91■□□□□ 0.14
PAAF1-215ENST00000544909 U2SURPO15042 1029 aaKnown RBP15.91■□□□□ 0.14
PAAF1-215ENST00000544909 HDAC1Q13547 482 aaPredicted RBP15.91■□□□□ 0.14
PAAF1-215ENST00000544909 FTSJ3Q8IY81 847 aaKnown RBP15.91■□□□□ 0.14
PAAF1-215ENST00000544909 WASLO00401 505 aaPredicted RBP15.9■□□□□ 0.14
PAAF1-215ENST00000544909 RGS3P49796 1198 aa15.9■□□□□ 0.14
PAAF1-215ENST00000544909 TSPOAP1O95153 1857 aa15.9■□□□□ 0.14
PAAF1-215ENST00000544909 RLBP1P12271 317 aa15.89■□□□□ 0.13
PAAF1-215ENST00000544909 NBR1Q14596 966 aa15.89■□□□□ 0.13
PAAF1-215ENST00000544909 ATF7IPQ6VMQ6 1270 aa15.89■□□□□ 0.13
PAAF1-215ENST00000544909 AKAP12Q02952 1782 aa15.89■□□□□ 0.13
PAAF1-215ENST00000544909 LMOD3Q0VAK6 560 aa15.88■□□□□ 0.13
PAAF1-215ENST00000544909 ZNF692Q9BU19 519 aaPredicted RBP15.88■□□□□ 0.13
PAAF1-215ENST00000544909 RSPH6AQ9H0K4 717 aa15.88■□□□□ 0.13
PAAF1-215ENST00000544909 SMC4Q9NTJ3 1288 aa15.88■□□□□ 0.13
PAAF1-215ENST00000544909 C3P01024 1663 aa15.88■□□□□ 0.13
PAAF1-215ENST00000544909 RIPK4P57078 832 aa15.87■□□□□ 0.13
PAAF1-215ENST00000544909 SKAP1Q86WV1 359 aa15.87■□□□□ 0.13
PAAF1-215ENST00000544909 UPF2Q9HAU5 1272 aaKnown RBP15.87■□□□□ 0.13
PAAF1-215ENST00000544909 POLKQ9UBT6 870 aa15.87■□□□□ 0.13
PAAF1-215ENST00000544909 PCDHB15Q9Y5E8 787 aa15.87■□□□□ 0.13
PAAF1-215ENST00000544909 ARHGAP45Q92619 1136 aa15.87■□□□□ 0.13
PAAF1-215ENST00000544909 CCDC61Q9Y6R9 512 aa15.87■□□□□ 0.13
PAAF1-215ENST00000544909 TNRQ92752 1358 aa15.87■□□□□ 0.13
PAAF1-215ENST00000544909 NRKQ7Z2Y5 1582 aa15.86■□□□□ 0.13
PAAF1-215ENST00000544909 KIF13AQ9H1H9 1805 aa15.86■□□□□ 0.13
PAAF1-215ENST00000544909 EXOSC9Q06265 439 aaKnown RBP15.86■□□□□ 0.13
PAAF1-215ENST00000544909 PIK3R4Q99570 1358 aa15.86■□□□□ 0.13
PAAF1-215ENST00000544909 TMEM2Q9UHN6 1383 aa15.86■□□□□ 0.13
PAAF1-215ENST00000544909 ITSN1Q15811 1721 aa15.86■□□□□ 0.13
PAAF1-215ENST00000544909 UBR1Q8IWV7 1749 aa15.85■□□□□ 0.13
PAAF1-215ENST00000544909 TRIM27P14373 513 aa15.85■□□□□ 0.13
PAAF1-215ENST00000544909 ESF1Q9H501 851 aaKnown RBP15.85■□□□□ 0.13
PAAF1-215ENST00000544909 MAP2P11137 1827 aaKnown RBP15.85■□□□□ 0.13
PAAF1-215ENST00000544909 BECN1Q14457 450 aa15.84■□□□□ 0.13
PAAF1-215ENST00000544909 NFE2L2Q16236 605 aa15.84■□□□□ 0.13
PAAF1-215ENST00000544909 SSH1Q8WYL5 1049 aa15.84■□□□□ 0.13
PAAF1-215ENST00000544909 METP08581 1390 aa15.84■□□□□ 0.13
PAAF1-215ENST00000544909 IFT57Q9NWB7 429 aa15.84■□□□□ 0.13
PAAF1-215ENST00000544909 PTCH1Q13635 1447 aa15.83■□□□□ 0.13
PAAF1-215ENST00000544909 USP19O94966 1318 aa15.83■□□□□ 0.12
PAAF1-215ENST00000544909 TOPAZ1Q8N9V7 1692 aa15.83■□□□□ 0.12
PAAF1-215ENST00000544909 HAP1P54257 671 aaPredicted RBP15.83■□□□□ 0.12
PAAF1-215ENST00000544909 SMC5Q8IY18 1101 aa15.83■□□□□ 0.12
PAAF1-215ENST00000544909 PLEKHG1Q9ULL1 1385 aa15.83■□□□□ 0.12
PAAF1-215ENST00000544909 GNAI1P63096 354 aa15.82■□□□□ 0.12
PAAF1-215ENST00000544909 TSR2Q969E8 191 aaKnown RBP15.82■□□□□ 0.12
PAAF1-215ENST00000544909 PDZRN3Q9UPQ7 1066 aa15.82■□□□□ 0.12
PAAF1-215ENST00000544909 KIF24Q5T7B8 1368 aa15.81■□□□□ 0.12
PAAF1-215ENST00000544909 PRKAR2BP31323 418 aa15.81■□□□□ 0.12
PAAF1-215ENST00000544909 IL13P35225 146 aa15.81■□□□□ 0.12
PAAF1-215ENST00000544909 WAPLQ7Z5K2 1190 aa15.81■□□□□ 0.12
PAAF1-215ENST00000544909 COG3Q96JB2 828 aa15.81■□□□□ 0.12
PAAF1-215ENST00000544909 BCL2L13Q9BXK5 485 aa15.81■□□□□ 0.12
PAAF1-215ENST00000544909 ZBTB40Q9NUA8 1239 aa15.81■□□□□ 0.12
PAAF1-215ENST00000544909 NUDT16Q96DE0 195 aaKnown RBP15.8■□□□□ 0.12
PAAF1-215ENST00000544909 BCL11AQ9H165 835 aa15.8■□□□□ 0.12
PAAF1-215ENST00000544909 ZNF853P0CG23 659 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms