RNA–Protein interactions for RNA: ENST00000544658.5

CDK2AP1-206, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

TSL 2 BASIC

Gene CDK2AP1, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-206ENST00000544658 XPCQ01831 940 aaPredicted RBP13.17□□□□□ -0.3
CDK2AP1-206ENST00000544658 TMC1Q8TDI8 760 aa13.17□□□□□ -0.3
CDK2AP1-206ENST00000544658 PHF8Q9UPP1 1060 aa13.17□□□□□ -0.3
CDK2AP1-206ENST00000544658 ITSN1Q15811 1721 aa13.16□□□□□ -0.3
CDK2AP1-206ENST00000544658 PLEKHG3A1L390 1219 aa13.16□□□□□ -0.3
CDK2AP1-206ENST00000544658 CARD14Q9BXL6 1004 aa13.16□□□□□ -0.3
CDK2AP1-206ENST00000544658 AKAP12Q02952 1782 aa13.16□□□□□ -0.3
CDK2AP1-206ENST00000544658 ACEP12821 1306 aa13.15□□□□□ -0.3
CDK2AP1-206ENST00000544658 PITPNM1O00562 1244 aa13.15□□□□□ -0.3
CDK2AP1-206ENST00000544658 FOXO3O43524 673 aa13.15□□□□□ -0.3
CDK2AP1-206ENST00000544658 PUS7Q96PZ0 661 aaKnown RBP13.15□□□□□ -0.3
CDK2AP1-206ENST00000544658 TOM1O60784 492 aa13.14□□□□□ -0.31
CDK2AP1-206ENST00000544658 ATAD2Q6PL18 1390 aa13.14□□□□□ -0.31
CDK2AP1-206ENST00000544658 CPSF1Q10570 1443 aaKnown RBP13.13□□□□□ -0.31
CDK2AP1-206ENST00000544658 NHSL1Q5SYE7 1610 aa13.13□□□□□ -0.31
CDK2AP1-206ENST00000544658 A0A1W2PP64 1363 aa13.13□□□□□ -0.31
CDK2AP1-206ENST00000544658 POLR3AO14802 1390 aaPredicted RBP13.13□□□□□ -0.31
CDK2AP1-206ENST00000544658 FXR2P51116 673 aaKnown RBP eCLIP13.13□□□□□ -0.31
CDK2AP1-206ENST00000544658 PANK3Q9H999 370 aa13.13□□□□□ -0.31
CDK2AP1-206ENST00000544658 PXDNQ92626 1479 aa13.12□□□□□ -0.31
CDK2AP1-206ENST00000544658 DDX10Q13206 875 aaKnown RBP13.12□□□□□ -0.31
CDK2AP1-206ENST00000544658 MON2Q7Z3U7 1717 aa13.12□□□□□ -0.31
CDK2AP1-206ENST00000544658 TRPM3Q9HCF6 1732 aaPredicted RBP13.12□□□□□ -0.31
CDK2AP1-206ENST00000544658 SSH2Q76I76 1423 aa13.12□□□□□ -0.31
CDK2AP1-206ENST00000544658 KIF1AQ12756 1690 aa13.12□□□□□ -0.31
CDK2AP1-206ENST00000544658 NGDNQ8NEJ9 315 aaKnown RBP13.11□□□□□ -0.31
CDK2AP1-206ENST00000544658 ZRANB1Q9UGI0 708 aa13.11□□□□□ -0.31
CDK2AP1-206ENST00000544658 NRKQ7Z2Y5 1582 aa13.11□□□□□ -0.31
CDK2AP1-206ENST00000544658 SLC24A1O60721 1099 aa13.1□□□□□ -0.31
CDK2AP1-206ENST00000544658 CDCA8Q53HL2 280 aa13.1□□□□□ -0.31
CDK2AP1-206ENST00000544658 PER1O15534 1290 aaPredicted RBP13.09□□□□□ -0.31
CDK2AP1-206ENST00000544658 USP6P35125 1406 aa13.09□□□□□ -0.31
CDK2AP1-206ENST00000544658 KRT28Q7Z3Y7 464 aa13.09□□□□□ -0.31
CDK2AP1-206ENST00000544658 AHDC1Q5TGY3 1603 aaPredicted RBP13.09□□□□□ -0.31
CDK2AP1-206ENST00000544658 SOS2Q07890 1332 aaPredicted RBP13.09□□□□□ -0.31
CDK2AP1-206ENST00000544658 ANKRD36BQ8N2N9 1353 aa13.08□□□□□ -0.31
CDK2AP1-206ENST00000544658 PHLPP1O60346 1717 aa13.08□□□□□ -0.32
CDK2AP1-206ENST00000544658 MARF1Q9Y4F3 1742 aaKnown RBP13.08□□□□□ -0.32
CDK2AP1-206ENST00000544658 HSPA1LP34931 641 aa13.08□□□□□ -0.32
CDK2AP1-206ENST00000544658 COL16A1Q07092 1604 aaPredicted RBP13.08□□□□□ -0.32
CDK2AP1-206ENST00000544658 KTN1Q86UP2 1357 aaKnown RBP13.07□□□□□ -0.32
CDK2AP1-206ENST00000544658 PSME1Q06323 249 aa13.07□□□□□ -0.32
CDK2AP1-206ENST00000544658 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.07□□□□□ -0.32
CDK2AP1-206ENST00000544658 ALS2Q96Q42 1657 aa13.07□□□□□ -0.32
CDK2AP1-206ENST00000544658 TTC21BQ7Z4L5 1316 aa13.07□□□□□ -0.32
CDK2AP1-206ENST00000544658 NSD3Q9BZ95 1437 aa13.06□□□□□ -0.32
CDK2AP1-206ENST00000544658 PIK3C2AO00443 1686 aa13.06□□□□□ -0.32
CDK2AP1-206ENST00000544658 NUTM2GQ5VZR2 741 aa13.06□□□□□ -0.32
CDK2AP1-206ENST00000544658 NME9Q86XW9 330 aa13.06□□□□□ -0.32
CDK2AP1-206ENST00000544658 NINLQ9Y2I6 1382 aa13.06□□□□□ -0.32
CDK2AP1-206ENST00000544658 SPDYE2BA6NHP3 402 aa13.05□□□□□ -0.32
CDK2AP1-206ENST00000544658 SPDYE6P0CI01 402 aa13.05□□□□□ -0.32
CDK2AP1-206ENST00000544658 SPDYE2Q495Y8 402 aa13.05□□□□□ -0.32
CDK2AP1-206ENST00000544658 NPHP3Q7Z494 1330 aa13.05□□□□□ -0.32
CDK2AP1-206ENST00000544658 PLEKHG5O94827 1062 aa13.04□□□□□ -0.32
CDK2AP1-206ENST00000544658 FBLN1P23142 703 aa13.04□□□□□ -0.32
CDK2AP1-206ENST00000544658 CNGB1Q14028 1251 aaPredicted RBP13.04□□□□□ -0.32
CDK2AP1-206ENST00000544658 HDGFL2Q7Z4V5 671 aaPredicted RBP13.04□□□□□ -0.32
CDK2AP1-206ENST00000544658 TERF2IPQ9NYB0 399 aa13.04□□□□□ -0.32
CDK2AP1-206ENST00000544658 SPATA31A3Q5VYP0 1347 aa13.04□□□□□ -0.32
CDK2AP1-206ENST00000544658 FYB1O15117 783 aa13.03□□□□□ -0.32
CDK2AP1-206ENST00000544658 PAK3O75914 559 aaPredicted RBP13.03□□□□□ -0.32
CDK2AP1-206ENST00000544658 AMER1Q5JTC6 1135 aaPredicted RBP13.03□□□□□ -0.32
CDK2AP1-206ENST00000544658 ZNF692Q9BU19 519 aaPredicted RBP13.03□□□□□ -0.32
CDK2AP1-206ENST00000544658 EDC4Q6P2E9 1401 aaKnown RBP13.03□□□□□ -0.32
CDK2AP1-206ENST00000544658 MED1Q15648 1581 aaPredicted RBP13.03□□□□□ -0.32
CDK2AP1-206ENST00000544658 KIF20BQ96Q89 1820 aa13.02□□□□□ -0.32
CDK2AP1-206ENST00000544658 CABLES1Q8TDN4 633 aa13.02□□□□□ -0.33
CDK2AP1-206ENST00000544658 GGNBP2Q9H3C7 697 aa13.02□□□□□ -0.33
CDK2AP1-206ENST00000544658 SBNO1A3KN83 1393 aa13.02□□□□□ -0.33
CDK2AP1-206ENST00000544658 CRYBG1Q9Y4K1 1723 aa13.02□□□□□ -0.33
CDK2AP1-206ENST00000544658 TNS3Q68CZ2 1445 aa13.01□□□□□ -0.33
CDK2AP1-206ENST00000544658 PNPLA6Q8IY17 1366 aa13□□□□□ -0.33
CDK2AP1-206ENST00000544658 CC2D1BQ5T0F9 858 aaKnown RBP13□□□□□ -0.33
CDK2AP1-206ENST00000544658 LMOD2Q6P5Q4 547 aa13□□□□□ -0.33
CDK2AP1-206ENST00000544658 ABTB2Q8N961 1025 aa12.99□□□□□ -0.33
CDK2AP1-206ENST00000544658 ABCA3Q99758 1704 aa12.99□□□□□ -0.33
CDK2AP1-206ENST00000544658 OVOS2A0A0J9YW53 1432 aa12.98□□□□□ -0.33
CDK2AP1-206ENST00000544658 OVOS2Q6IE36 1432 aa12.98□□□□□ -0.33
CDK2AP1-206ENST00000544658 HAX1O00165 279 aa12.98□□□□□ -0.33
CDK2AP1-206ENST00000544658 NLRP6P59044 892 aa12.98□□□□□ -0.33
CDK2AP1-206ENST00000544658 USP54Q70EL1 1684 aa12.98□□□□□ -0.33
CDK2AP1-206ENST00000544658 USP31Q70CQ4 1352 aa12.97□□□□□ -0.33
CDK2AP1-206ENST00000544658 ANKRD26Q9UPS8 1709 aa12.97□□□□□ -0.33
CDK2AP1-206ENST00000544658 TTC21AQ8NDW8 1320 aa12.97□□□□□ -0.33
CDK2AP1-206ENST00000544658 LRRC59Q96AG4 307 aaKnown RBP12.97□□□□□ -0.33
CDK2AP1-206ENST00000544658 KNSTRNQ9Y448 316 aa12.97□□□□□ -0.33
CDK2AP1-206ENST00000544658 COL22A1Q8NFW1 1626 aaPredicted RBP12.97□□□□□ -0.33
CDK2AP1-206ENST00000544658 PHRF1Q9P1Y6 1649 aaKnown RBP12.96□□□□□ -0.33
CDK2AP1-206ENST00000544658 SOX12O15370 315 aa12.96□□□□□ -0.33
CDK2AP1-206ENST00000544658 SHPRHQ149N8 1683 aa12.96□□□□□ -0.34
CDK2AP1-206ENST00000544658 BRD4O60885 1362 aaPredicted RBP12.95□□□□□ -0.34
CDK2AP1-206ENST00000544658 USP19O94966 1318 aa12.95□□□□□ -0.34
CDK2AP1-206ENST00000544658 CGNL1Q0VF96 1302 aa12.95□□□□□ -0.34
CDK2AP1-206ENST00000544658 TNNT2P45379 298 aaPredicted RBP12.95□□□□□ -0.34
CDK2AP1-206ENST00000544658 LRP6O75581 1613 aa12.95□□□□□ -0.34
CDK2AP1-206ENST00000544658 SLIT3O75094 1523 aa12.94□□□□□ -0.34
CDK2AP1-206ENST00000544658 NFAT5O94916 1531 aa12.94□□□□□ -0.34
CDK2AP1-206ENST00000544658 MAP2P11137 1827 aaKnown RBP12.93□□□□□ -0.34
CDK2AP1-206ENST00000544658 EVX2Q03828 476 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms