RNA–Protein interactions for RNA: ENST00000544128.5

SP140-214, Transcript of SP140 nuclear body protein, humanhuman

TSL 3

Gene SP140, Length 910 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-214ENST00000544128 USP32Q8NFA0 1604 aa13.06□□□□□ -0.32
SP140-214ENST00000544128 PPIP5K1Q6PFW1 1433 aa13.06□□□□□ -0.32
SP140-214ENST00000544128 MEX3CQ5U5Q3 659 aaKnown RBP13.06□□□□□ -0.32
SP140-214ENST00000544128 CADPS2Q86UW7 1296 aa13.06□□□□□ -0.32
SP140-214ENST00000544128 IFNLR1Q8IU57 520 aaPredicted RBP13.06□□□□□ -0.32
SP140-214ENST00000544128 DCCP43146 1447 aa13.05□□□□□ -0.32
SP140-214ENST00000544128 ANKARQ7Z5J8 1434 aa13.05□□□□□ -0.32
SP140-214ENST00000544128 DIEXFQ68CQ4 756 aaKnown RBP13.05□□□□□ -0.32
SP140-214ENST00000544128 TAOK2Q9UL54 1235 aa13.05□□□□□ -0.32
SP140-214ENST00000544128 NINLQ9Y2I6 1382 aa13.05□□□□□ -0.32
SP140-214ENST00000544128 PRKCSHP14314 528 aaPredicted RBP13.04□□□□□ -0.32
SP140-214ENST00000544128 ESCO1Q5FWF5 840 aa13.04□□□□□ -0.32
SP140-214ENST00000544128 PMFBP1Q8TBY8 1022 aa13.04□□□□□ -0.32
SP140-214ENST00000544128 TERF2IPQ9NYB0 399 aa13.04□□□□□ -0.32
SP140-214ENST00000544128 TOPAZ1Q8N9V7 1692 aa13.04□□□□□ -0.32
SP140-214ENST00000544128 ITSN1Q15811 1721 aa13.04□□□□□ -0.32
SP140-214ENST00000544128 PLEKHG3A1L390 1219 aa13.03□□□□□ -0.32
SP140-214ENST00000544128 HDGFL2Q7Z4V5 671 aaPredicted RBP13.03□□□□□ -0.32
SP140-214ENST00000544128 MST1RQ04912 1400 aa13.03□□□□□ -0.32
SP140-214ENST00000544128 C1orf167Q5SNV9 1468 aa13.03□□□□□ -0.32
SP140-214ENST00000544128 MKRN4PQ13434 485 aaPredicted RBP13.02□□□□□ -0.33
SP140-214ENST00000544128 NGDNQ8NEJ9 315 aaKnown RBP13.02□□□□□ -0.33
SP140-214ENST00000544128 ORAI2Q96SN7 254 aa13.02□□□□□ -0.33
SP140-214ENST00000544128 PHF8Q9UPP1 1060 aa13.02□□□□□ -0.33
SP140-214ENST00000544128 ACEP12821 1306 aa13.02□□□□□ -0.33
SP140-214ENST00000544128 CDK12Q9NYV4 1490 aaPredicted RBP13.02□□□□□ -0.33
SP140-214ENST00000544128 COL16A1Q07092 1604 aaPredicted RBP13.02□□□□□ -0.33
SP140-214ENST00000544128 CARD14Q9BXL6 1004 aa13.01□□□□□ -0.33
SP140-214ENST00000544128 SLAIN2Q9P270 581 aa13.01□□□□□ -0.33
SP140-214ENST00000544128 A0A1W2PP64 1363 aa13.01□□□□□ -0.33
SP140-214ENST00000544128 ANKRD36BQ8N2N9 1353 aa13.01□□□□□ -0.33
SP140-214ENST00000544128 CD163L1Q9NR16 1453 aa13.01□□□□□ -0.33
SP140-214ENST00000544128 KTN1Q86UP2 1357 aaKnown RBP13□□□□□ -0.33
SP140-214ENST00000544128 SPATA31A6Q5VVP1 1343 aa13□□□□□ -0.33
SP140-214ENST00000544128 PER1O15534 1290 aaPredicted RBP13□□□□□ -0.33
SP140-214ENST00000544128 CNGB1Q14028 1251 aaPredicted RBP13□□□□□ -0.33
SP140-214ENST00000544128 RNF39Q9H2S5 420 aa13□□□□□ -0.33
SP140-214ENST00000544128 KNSTRNQ9Y448 316 aa13□□□□□ -0.33
SP140-214ENST00000544128 CPSF1Q10570 1443 aaKnown RBP12.99□□□□□ -0.33
SP140-214ENST00000544128 ZNF692Q9BU19 519 aaPredicted RBP12.99□□□□□ -0.33
SP140-214ENST00000544128 ZRANB1Q9UGI0 708 aa12.99□□□□□ -0.33
SP140-214ENST00000544128 AKAP12Q02952 1782 aa12.99□□□□□ -0.33
SP140-214ENST00000544128 NSD3Q9BZ95 1437 aa12.98□□□□□ -0.33
SP140-214ENST00000544128 POLR3AO14802 1390 aaPredicted RBP12.98□□□□□ -0.33
SP140-214ENST00000544128 KIF1AQ12756 1690 aa12.96□□□□□ -0.33
SP140-214ENST00000544128 SHPRHQ149N8 1683 aa12.96□□□□□ -0.33
SP140-214ENST00000544128 NUTM2BA6NNL0 878 aaPredicted RBP12.96□□□□□ -0.33
SP140-214ENST00000544128 NUTM2EB1AL46 878 aaPredicted RBP12.96□□□□□ -0.33
SP140-214ENST00000544128 FOXO3O43524 673 aa12.96□□□□□ -0.33
SP140-214ENST00000544128 PSME1Q06323 249 aa12.96□□□□□ -0.33
SP140-214ENST00000544128 BRINP3Q76B58 766 aa12.96□□□□□ -0.33
SP140-214ENST00000544128 NUTM2AQ8IVF1 878 aaPredicted RBP12.96□□□□□ -0.33
SP140-214ENST00000544128 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.96□□□□□ -0.33
SP140-214ENST00000544128 MON2Q7Z3U7 1717 aa12.96□□□□□ -0.34
SP140-214ENST00000544128 RGS12O14924 1447 aa12.96□□□□□ -0.34
SP140-214ENST00000544128 CC2D1BQ5T0F9 858 aaKnown RBP12.95□□□□□ -0.34
SP140-214ENST00000544128 USP6P35125 1406 aa12.95□□□□□ -0.34
SP140-214ENST00000544128 EDC4Q6P2E9 1401 aaKnown RBP12.95□□□□□ -0.34
SP140-214ENST00000544128 EP400Q96L91 3159 aa12.94□□□□□ -0.34
SP140-214ENST00000544128 CGNL1Q0VF96 1302 aa12.94□□□□□ -0.34
SP140-214ENST00000544128 TTC21BQ7Z4L5 1316 aa12.94□□□□□ -0.34
SP140-214ENST00000544128 ANP32CO43423 234 aa12.94□□□□□ -0.34
SP140-214ENST00000544128 XPCQ01831 940 aaPredicted RBP12.94□□□□□ -0.34
SP140-214ENST00000544128 KRT28Q7Z3Y7 464 aa12.94□□□□□ -0.34
SP140-214ENST00000544128 DDX17Q92841 729 aaKnown RBP12.94□□□□□ -0.34
SP140-214ENST00000544128 AFF2P51816 1311 aa12.93□□□□□ -0.34
SP140-214ENST00000544128 PAK3O75914 559 aaPredicted RBP12.93□□□□□ -0.34
SP140-214ENST00000544128 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.93□□□□□ -0.34
SP140-214ENST00000544128 NPHP3Q7Z494 1330 aa12.92□□□□□ -0.34
SP140-214ENST00000544128 FYB1O15117 783 aa12.92□□□□□ -0.34
SP140-214ENST00000544128 NME9Q86XW9 330 aa12.92□□□□□ -0.34
SP140-214ENST00000544128 GGNBP2Q9H3C7 697 aa12.92□□□□□ -0.34
SP140-214ENST00000544128 NRKQ7Z2Y5 1582 aa12.91□□□□□ -0.34
SP140-214ENST00000544128 SSH2Q76I76 1423 aa12.91□□□□□ -0.34
SP140-214ENST00000544128 BRD4O60885 1362 aaPredicted RBP12.91□□□□□ -0.34
SP140-214ENST00000544128 TTC21AQ8NDW8 1320 aa12.9□□□□□ -0.34
SP140-214ENST00000544128 KIF20BQ96Q89 1820 aa12.9□□□□□ -0.34
SP140-214ENST00000544128 RBM6P78332 1123 aaKnown RBP12.9□□□□□ -0.34
SP140-214ENST00000544128 MORC1Q86VD1 984 aa12.9□□□□□ -0.34
SP140-214ENST00000544128 MIER1Q8N108 512 aa12.9□□□□□ -0.34
SP140-214ENST00000544128 PRKRIP1Q9H875 184 aaPredicted RBP12.9□□□□□ -0.34
SP140-214ENST00000544128 QTRT2Q9H974 415 aaKnown RBP12.9□□□□□ -0.34
SP140-214ENST00000544128 NPC1L1Q9UHC9 1359 aa12.9□□□□□ -0.34
SP140-214ENST00000544128 LMOD2Q6P5Q4 547 aa12.89□□□□□ -0.35
SP140-214ENST00000544128 BBXQ8WY36 941 aaPredicted RBP12.89□□□□□ -0.35
SP140-214ENST00000544128 NSD2O96028 1365 aa12.89□□□□□ -0.35
SP140-214ENST00000544128 RALBP1Q15311 655 aa12.88□□□□□ -0.35
SP140-214ENST00000544128 NUTM2GQ5VZR2 741 aa12.88□□□□□ -0.35
SP140-214ENST00000544128 ABTB2Q8N961 1025 aa12.88□□□□□ -0.35
SP140-214ENST00000544128 PXDNQ92626 1479 aa12.88□□□□□ -0.35
SP140-214ENST00000544128 TRPM3Q9HCF6 1732 aaPredicted RBP12.88□□□□□ -0.35
SP140-214ENST00000544128 NHSL1Q5SYE7 1610 aa12.88□□□□□ -0.35
SP140-214ENST00000544128 AHDC1Q5TGY3 1603 aaPredicted RBP12.88□□□□□ -0.35
SP140-214ENST00000544128 TNNT2P45379 298 aaPredicted RBP12.87□□□□□ -0.35
SP140-214ENST00000544128 NLRP6P59044 892 aa12.87□□□□□ -0.35
SP140-214ENST00000544128 COG3Q96JB2 828 aa12.87□□□□□ -0.35
SP140-214ENST00000544128 SOS2Q07890 1332 aaPredicted RBP12.87□□□□□ -0.35
SP140-214ENST00000544128 SBNO1A3KN83 1393 aa12.86□□□□□ -0.35
SP140-214ENST00000544128 PARD3Q8TEW0 1356 aa12.86□□□□□ -0.35
SP140-214ENST00000544128 ANKRD26Q9UPS8 1709 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms