RNA–Protein interactions for RNA: ENST00000543768.1

SCNN1A-221, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCNN1A, Length 2,361 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-221ENST00000543768 KNDC1Q76NI1 1749 aa20.8■□□□□ 0.92
SCNN1A-221ENST00000543768 WASLO00401 505 aaPredicted RBP20.8■□□□□ 0.92
SCNN1A-221ENST00000543768 DIAPH1O60610 1272 aaKnown RBP20.8■□□□□ 0.92
SCNN1A-221ENST00000543768 CANXP27824 592 aaKnown RBP20.8■□□□□ 0.92
SCNN1A-221ENST00000543768 COG6Q9Y2V7 657 aa20.8■□□□□ 0.92
SCNN1A-221ENST00000543768 TNRQ92752 1358 aa20.8■□□□□ 0.92
SCNN1A-221ENST00000543768 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.8■□□□□ 0.92
SCNN1A-221ENST00000543768 FRAT1Q92837 279 aaPredicted RBP20.8■□□□□ 0.92
SCNN1A-221ENST00000543768 TRIM35Q9UPQ4 493 aa20.8■□□□□ 0.92
SCNN1A-221ENST00000543768 CPSF1Q10570 1443 aaKnown RBP20.79■□□□□ 0.92
SCNN1A-221ENST00000543768 TXNDC2Q86VQ3 553 aa20.79■□□□□ 0.92
SCNN1A-221ENST00000543768 IGHDP01880 384 aa20.78■□□□□ 0.92
SCNN1A-221ENST00000543768 DEKP35659 375 aaKnown RBP20.78■□□□□ 0.92
SCNN1A-221ENST00000543768 NPM2Q86SE8 214 aaKnown RBP20.78■□□□□ 0.92
SCNN1A-221ENST00000543768 UBR1Q8IWV7 1749 aa20.78■□□□□ 0.92
SCNN1A-221ENST00000543768 TECPR2O15040 1411 aa20.78■□□□□ 0.92
SCNN1A-221ENST00000543768 CLUAP1Q96AJ1 413 aa20.78■□□□□ 0.92
SCNN1A-221ENST00000543768 SIRT1Q96EB6 747 aa20.78■□□□□ 0.92
SCNN1A-221ENST00000543768 ZBTB47Q9UFB7 747 aaPredicted RBP20.78■□□□□ 0.92
SCNN1A-221ENST00000543768 FAM135BQ49AJ0 1406 aa20.77■□□□□ 0.92
SCNN1A-221ENST00000543768 MAP2P11137 1827 aaKnown RBP20.77■□□□□ 0.92
SCNN1A-221ENST00000543768 HDGFP51858 240 aaKnown RBP20.77■□□□□ 0.92
SCNN1A-221ENST00000543768 CDC42BPGQ6DT37 1551 aa20.77■□□□□ 0.92
SCNN1A-221ENST00000543768 MAPK8IP3Q9UPT6 1336 aa20.77■□□□□ 0.91
SCNN1A-221ENST00000543768 FBLN1P23142 703 aa20.77■□□□□ 0.91
SCNN1A-221ENST00000543768 POLKQ9UBT6 870 aa20.77■□□□□ 0.91
SCNN1A-221ENST00000543768 PPIP5K1Q6PFW1 1433 aa20.76■□□□□ 0.91
SCNN1A-221ENST00000543768 BCL2L13Q9BXK5 485 aa20.75■□□□□ 0.91
SCNN1A-221ENST00000543768 TNNQ9UQP3 1299 aa20.75■□□□□ 0.91
SCNN1A-221ENST00000543768 TMEM2Q9UHN6 1383 aa20.75■□□□□ 0.91
SCNN1A-221ENST00000543768 EDC4Q6P2E9 1401 aaKnown RBP20.75■□□□□ 0.91
SCNN1A-221ENST00000543768 CPS1P31327 1500 aa20.75■□□□□ 0.91
SCNN1A-221ENST00000543768 RLBP1P12271 317 aa20.75■□□□□ 0.91
SCNN1A-221ENST00000543768 TSR2Q969E8 191 aaKnown RBP20.74■□□□□ 0.91
SCNN1A-221ENST00000543768 CT47B1P0C2W7 299 aaPredicted RBP20.73■□□□□ 0.91
SCNN1A-221ENST00000543768 NUDT16Q96DE0 195 aaKnown RBP20.73■□□□□ 0.91
SCNN1A-221ENST00000543768 PNNQ9H307 717 aaKnown RBP20.73■□□□□ 0.91
SCNN1A-221ENST00000543768 IL16Q14005 1332 aa20.73■□□□□ 0.91
SCNN1A-221ENST00000543768 FCHSD2O94868 740 aa20.72■□□□□ 0.91
SCNN1A-221ENST00000543768 RIPK4P57078 832 aa20.72■□□□□ 0.91
SCNN1A-221ENST00000543768 LRRC7Q96NW7 1537 aa20.71■□□□□ 0.91
SCNN1A-221ENST00000543768 MON2Q7Z3U7 1717 aa20.71■□□□□ 0.91
SCNN1A-221ENST00000543768 RGS3P49796 1198 aa20.71■□□□□ 0.91
SCNN1A-221ENST00000543768 AAMPQ13685 434 aa20.71■□□□□ 0.91
SCNN1A-221ENST00000543768 C8orf34Q49A92 452 aa20.71■□□□□ 0.91
SCNN1A-221ENST00000543768 NCKAP5LQ9HCH0 1330 aa20.71■□□□□ 0.91
SCNN1A-221ENST00000543768 EXOSC9Q06265 439 aaKnown RBP20.71■□□□□ 0.91
SCNN1A-221ENST00000543768 FAM161AQ3B820 660 aa20.71■□□□□ 0.91
SCNN1A-221ENST00000543768 CCDC61Q9Y6R9 512 aa20.71■□□□□ 0.91
SCNN1A-221ENST00000543768 PPM1GO15355 546 aaPredicted RBP20.7■□□□□ 0.9
SCNN1A-221ENST00000543768 NME9Q86XW9 330 aa20.7■□□□□ 0.9
SCNN1A-221ENST00000543768 RSPH6AQ9H0K4 717 aa20.7■□□□□ 0.9
SCNN1A-221ENST00000543768 ADAMTS13Q76LX8 1427 aa20.7■□□□□ 0.9
SCNN1A-221ENST00000543768 DNAJC5Q9H3Z4 198 aa20.7■□□□□ 0.9
SCNN1A-221ENST00000543768 AKAP12Q02952 1782 aa20.69■□□□□ 0.9
SCNN1A-221ENST00000543768 PRKCSHP14314 528 aaPredicted RBP20.69■□□□□ 0.9
SCNN1A-221ENST00000543768 ZRANB1Q9UGI0 708 aa20.68■□□□□ 0.9
SCNN1A-221ENST00000543768 EMILIN1Q9Y6C2 1016 aa20.68■□□□□ 0.9
SCNN1A-221ENST00000543768 ROBO2Q9HCK4 1378 aa20.68■□□□□ 0.9
SCNN1A-221ENST00000543768 PCDHB15Q9Y5E8 787 aa20.67■□□□□ 0.9
SCNN1A-221ENST00000543768 AATKQ6ZMQ8 1374 aa20.67■□□□□ 0.9
SCNN1A-221ENST00000543768 PRR36Q9H6K5 1346 aa20.67■□□□□ 0.9
SCNN1A-221ENST00000543768 PRKAR2BP31323 418 aa20.67■□□□□ 0.9
SCNN1A-221ENST00000543768 LTKP29376 864 aa20.66■□□□□ 0.9
SCNN1A-221ENST00000543768 C3P01024 1663 aa20.66■□□□□ 0.9
SCNN1A-221ENST00000543768 ZKSCAN2Q63HK3 967 aa20.66■□□□□ 0.9
SCNN1A-221ENST00000543768 ITSN1Q15811 1721 aa20.66■□□□□ 0.9
SCNN1A-221ENST00000543768 CDK12Q9NYV4 1490 aaPredicted RBP20.65■□□□□ 0.9
SCNN1A-221ENST00000543768 PMFBP1Q8TBY8 1022 aa20.65■□□□□ 0.9
SCNN1A-221ENST00000543768 SSH1Q8WYL5 1049 aa20.65■□□□□ 0.9
SCNN1A-221ENST00000543768 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.65■□□□□ 0.9
SCNN1A-221ENST00000543768 PLEKHG1Q9ULL1 1385 aa20.64■□□□□ 0.9
SCNN1A-221ENST00000543768 IL13P35225 146 aa20.64■□□□□ 0.89
SCNN1A-221ENST00000543768 MVPQ14764 893 aaKnown RBP20.64■□□□□ 0.89
SCNN1A-221ENST00000543768 SMC4Q9NTJ3 1288 aa20.64■□□□□ 0.89
SCNN1A-221ENST00000543768 DZIP1LQ8IYY4 767 aaKnown RBP20.63■□□□□ 0.89
SCNN1A-221ENST00000543768 PHACTR3Q96KR7 559 aa20.63■□□□□ 0.89
SCNN1A-221ENST00000543768 ZNF692Q9BU19 519 aaPredicted RBP20.63■□□□□ 0.89
SCNN1A-221ENST00000543768 HMOX1P09601 288 aa20.63■□□□□ 0.89
SCNN1A-221ENST00000543768 COG3Q96JB2 828 aa20.63■□□□□ 0.89
SCNN1A-221ENST00000543768 CEBPAP49715 358 aaPredicted RBP20.62■□□□□ 0.89
SCNN1A-221ENST00000543768 TRIM27P14373 513 aa20.61■□□□□ 0.89
SCNN1A-221ENST00000543768 VIRMAQ69YN4 1812 aaKnown RBP20.61■□□□□ 0.89
SCNN1A-221ENST00000543768 NFE2L2Q16236 605 aa20.6■□□□□ 0.89
SCNN1A-221ENST00000543768 NEFMP07197 916 aa20.6■□□□□ 0.89
SCNN1A-221ENST00000543768 FTSJ3Q8IY81 847 aaKnown RBP20.6■□□□□ 0.89
SCNN1A-221ENST00000543768 RRS1Q15050 365 aaKnown RBP20.59■□□□□ 0.89
SCNN1A-221ENST00000543768 DDRGK1Q96HY6 314 aa20.59■□□□□ 0.89
SCNN1A-221ENST00000543768 TOPAZ1Q8N9V7 1692 aa20.59■□□□□ 0.89
SCNN1A-221ENST00000543768 NBR1Q14596 966 aa20.58■□□□□ 0.89
SCNN1A-221ENST00000543768 ATF7IPQ6VMQ6 1270 aa20.58■□□□□ 0.89
SCNN1A-221ENST00000543768 PTPRUQ92729 1446 aa20.58■□□□□ 0.89
SCNN1A-221ENST00000543768 NRKQ7Z2Y5 1582 aa20.57■□□□□ 0.88
SCNN1A-221ENST00000543768 NOB1Q9ULX3 412 aaKnown RBP20.57■□□□□ 0.88
SCNN1A-221ENST00000543768 RWDD1Q9H446 243 aaPredicted RBP20.57■□□□□ 0.88
SCNN1A-221ENST00000543768 SLC26A8Q96RN1 970 aa20.56■□□□□ 0.88
SCNN1A-221ENST00000543768 DLG5Q8TDM6 1919 aa20.56■□□□□ 0.88
SCNN1A-221ENST00000543768 PLEKHG3A1L390 1219 aa20.55■□□□□ 0.88
SCNN1A-221ENST00000543768 ALDH1L2Q3SY69 923 aa20.55■□□□□ 0.88
SCNN1A-221ENST00000543768 TTC21BQ7Z4L5 1316 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms