RNA–Protein interactions for RNA: ENST00000543744.1

PTPN6-222, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best)

Gene PTPN6, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-222ENST00000543744 DIAPH1O60610 1272 aaKnown RBP22.96■■□□□ 1.27
PTPN6-222ENST00000543744 TMPOP42166 694 aaKnown RBP22.96■■□□□ 1.27
PTPN6-222ENST00000543744 HDGFP51858 240 aaKnown RBP22.96■■□□□ 1.27
PTPN6-222ENST00000543744 CLUAP1Q96AJ1 413 aa22.96■■□□□ 1.27
PTPN6-222ENST00000543744 PNPLA6Q8IY17 1366 aa22.95■■□□□ 1.26
PTPN6-222ENST00000543744 KIF20BQ96Q89 1820 aa22.95■■□□□ 1.26
PTPN6-222ENST00000543744 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.94■■□□□ 1.26
PTPN6-222ENST00000543744 PNNQ9H307 717 aaKnown RBP22.94■■□□□ 1.26
PTPN6-222ENST00000543744 METP08581 1390 aa22.94■■□□□ 1.26
PTPN6-222ENST00000543744 NRXN3Q9Y4C0 1643 aa22.94■■□□□ 1.26
PTPN6-222ENST00000543744 WASLO00401 505 aaPredicted RBP22.93■■□□□ 1.26
PTPN6-222ENST00000543744 AAMPQ13685 434 aa22.92■■□□□ 1.26
PTPN6-222ENST00000543744 IGHDP01880 384 aa22.91■■□□□ 1.26
PTPN6-222ENST00000543744 CT47B1P0C2W7 299 aaPredicted RBP22.91■■□□□ 1.26
PTPN6-222ENST00000543744 BCL2L13Q9BXK5 485 aa22.91■■□□□ 1.26
PTPN6-222ENST00000543744 TRIM35Q9UPQ4 493 aa22.91■■□□□ 1.26
PTPN6-222ENST00000543744 TXNDC2Q86VQ3 553 aa22.91■■□□□ 1.26
PTPN6-222ENST00000543744 TNRQ92752 1358 aa22.9■■□□□ 1.26
PTPN6-222ENST00000543744 RGS3P49796 1198 aa22.9■■□□□ 1.26
PTPN6-222ENST00000543744 FAM161AQ3B820 660 aa22.9■■□□□ 1.26
PTPN6-222ENST00000543744 PPIP5K1Q6PFW1 1433 aa22.89■■□□□ 1.25
PTPN6-222ENST00000543744 SIRT1Q96EB6 747 aa22.89■■□□□ 1.25
PTPN6-222ENST00000543744 TSR2Q969E8 191 aaKnown RBP22.88■■□□□ 1.25
PTPN6-222ENST00000543744 POLKQ9UBT6 870 aa22.88■■□□□ 1.25
PTPN6-222ENST00000543744 FAM135BQ49AJ0 1406 aa22.88■■□□□ 1.25
PTPN6-222ENST00000543744 IL16Q14005 1332 aa22.88■■□□□ 1.25
PTPN6-222ENST00000543744 RIPK4P57078 832 aa22.87■■□□□ 1.25
PTPN6-222ENST00000543744 CPSF1Q10570 1443 aaKnown RBP22.87■■□□□ 1.25
PTPN6-222ENST00000543744 PPM1GO15355 546 aaPredicted RBP22.87■■□□□ 1.25
PTPN6-222ENST00000543744 FCHSD2O94868 740 aa22.87■■□□□ 1.25
PTPN6-222ENST00000543744 RLBP1P12271 317 aa22.87■■□□□ 1.25
PTPN6-222ENST00000543744 EDC4Q6P2E9 1401 aaKnown RBP22.87■■□□□ 1.25
PTPN6-222ENST00000543744 NUDT16Q96DE0 195 aaKnown RBP22.86■■□□□ 1.25
PTPN6-222ENST00000543744 TECPR2O15040 1411 aa22.86■■□□□ 1.25
PTPN6-222ENST00000543744 EXOSC9Q06265 439 aaKnown RBP22.85■■□□□ 1.25
PTPN6-222ENST00000543744 C8orf34Q49A92 452 aa22.85■■□□□ 1.25
PTPN6-222ENST00000543744 TNNQ9UQP3 1299 aa22.85■■□□□ 1.25
PTPN6-222ENST00000543744 TMEM2Q9UHN6 1383 aa22.85■■□□□ 1.25
PTPN6-222ENST00000543744 CDC42BPGQ6DT37 1551 aa22.84■■□□□ 1.25
PTPN6-222ENST00000543744 FBLN1P23142 703 aa22.84■■□□□ 1.25
PTPN6-222ENST00000543744 ZKSCAN2Q63HK3 967 aa22.84■■□□□ 1.25
PTPN6-222ENST00000543744 PMFBP1Q8TBY8 1022 aa22.84■■□□□ 1.25
PTPN6-222ENST00000543744 DDRGK1Q96HY6 314 aa22.84■■□□□ 1.25
PTPN6-222ENST00000543744 KNDC1Q76NI1 1749 aa22.83■■□□□ 1.25
PTPN6-222ENST00000543744 CCDC61Q9Y6R9 512 aa22.83■■□□□ 1.25
PTPN6-222ENST00000543744 NEFMP07197 916 aa22.82■■□□□ 1.24
PTPN6-222ENST00000543744 NME9Q86XW9 330 aa22.81■■□□□ 1.24
PTPN6-222ENST00000543744 RSPH6AQ9H0K4 717 aa22.81■■□□□ 1.24
PTPN6-222ENST00000543744 SMC4Q9NTJ3 1288 aa22.81■■□□□ 1.24
PTPN6-222ENST00000543744 CPS1P31327 1500 aa22.81■■□□□ 1.24
PTPN6-222ENST00000543744 PRKAR2BP31323 418 aa22.81■■□□□ 1.24
PTPN6-222ENST00000543744 LRRC7Q96NW7 1537 aa22.8■■□□□ 1.24
PTPN6-222ENST00000543744 NBR1Q14596 966 aa22.8■■□□□ 1.24
PTPN6-222ENST00000543744 FTSJ3Q8IY81 847 aaKnown RBP22.8■■□□□ 1.24
PTPN6-222ENST00000543744 UBR1Q8IWV7 1749 aa22.79■■□□□ 1.24
PTPN6-222ENST00000543744 MVPQ14764 893 aaKnown RBP22.79■■□□□ 1.24
PTPN6-222ENST00000543744 DZIP1LQ8IYY4 767 aaKnown RBP22.79■■□□□ 1.24
PTPN6-222ENST00000543744 PCDHB15Q9Y5E8 787 aa22.79■■□□□ 1.24
PTPN6-222ENST00000543744 NCKAP5LQ9HCH0 1330 aa22.78■■□□□ 1.24
PTPN6-222ENST00000543744 EMILIN1Q9Y6C2 1016 aa22.78■■□□□ 1.24
PTPN6-222ENST00000543744 AATKQ6ZMQ8 1374 aa22.78■■□□□ 1.24
PTPN6-222ENST00000543744 SSH1Q8WYL5 1049 aa22.77■■□□□ 1.24
PTPN6-222ENST00000543744 COG3Q96JB2 828 aa22.77■■□□□ 1.24
PTPN6-222ENST00000543744 MAP2P11137 1827 aaKnown RBP22.76■■□□□ 1.23
PTPN6-222ENST00000543744 ZNF692Q9BU19 519 aaPredicted RBP22.76■■□□□ 1.23
PTPN6-222ENST00000543744 ZRANB1Q9UGI0 708 aa22.76■■□□□ 1.23
PTPN6-222ENST00000543744 RWDD1Q9H446 243 aaPredicted RBP22.75■■□□□ 1.23
PTPN6-222ENST00000543744 ROBO2Q9HCK4 1378 aa22.75■■□□□ 1.23
PTPN6-222ENST00000543744 CDK12Q9NYV4 1490 aaPredicted RBP22.75■■□□□ 1.23
PTPN6-222ENST00000543744 HMOX1P09601 288 aa22.75■■□□□ 1.23
PTPN6-222ENST00000543744 IL13P35225 146 aa22.75■■□□□ 1.23
PTPN6-222ENST00000543744 ADAMTS13Q76LX8 1427 aa22.75■■□□□ 1.23
PTPN6-222ENST00000543744 NFE2L2Q16236 605 aa22.74■■□□□ 1.23
PTPN6-222ENST00000543744 MON2Q7Z3U7 1717 aa22.73■■□□□ 1.23
PTPN6-222ENST00000543744 TRIM27P14373 513 aa22.73■■□□□ 1.23
PTPN6-222ENST00000543744 PHACTR3Q96KR7 559 aa22.73■■□□□ 1.23
PTPN6-222ENST00000543744 PLEKHG1Q9ULL1 1385 aa22.73■■□□□ 1.23
PTPN6-222ENST00000543744 PRR36Q9H6K5 1346 aa22.73■■□□□ 1.23
PTPN6-222ENST00000543744 ATF7IPQ6VMQ6 1270 aa22.72■■□□□ 1.23
PTPN6-222ENST00000543744 LTKP29376 864 aa22.72■■□□□ 1.23
PTPN6-222ENST00000543744 NOB1Q9ULX3 412 aaKnown RBP22.71■■□□□ 1.23
PTPN6-222ENST00000543744 CALD1Q05682 793 aaKnown RBP22.7■■□□□ 1.23
PTPN6-222ENST00000543744 DDX19BQ9UMR2 479 aa22.7■■□□□ 1.22
PTPN6-222ENST00000543744 KIF16BQ96L93 1317 aa22.7■■□□□ 1.22
PTPN6-222ENST00000543744 AKAP12Q02952 1782 aa22.69■■□□□ 1.22
PTPN6-222ENST00000543744 IPO8O15397 1037 aaKnown RBP22.69■■□□□ 1.22
PTPN6-222ENST00000543744 RRS1Q15050 365 aaKnown RBP22.69■■□□□ 1.22
PTPN6-222ENST00000543744 ITSN1Q15811 1721 aa22.69■■□□□ 1.22
PTPN6-222ENST00000543744 ALDH1L2Q3SY69 923 aa22.69■■□□□ 1.22
PTPN6-222ENST00000543744 LAS1LQ9Y4W2 734 aaKnown RBP22.69■■□□□ 1.22
PTPN6-222ENST00000543744 C3P01024 1663 aa22.68■■□□□ 1.22
PTPN6-222ENST00000543744 RTL5Q5HYW3 569 aaPredicted RBP22.68■■□□□ 1.22
PTPN6-222ENST00000543744 ITPRIPQ8IWB1 547 aa22.68■■□□□ 1.22
PTPN6-222ENST00000543744 CEBPAP49715 358 aaPredicted RBP22.67■■□□□ 1.22
PTPN6-222ENST00000543744 PDZRN3Q9UPQ7 1066 aa22.67■■□□□ 1.22
PTPN6-222ENST00000543744 EID1Q9Y6B2 187 aa22.67■■□□□ 1.22
PTPN6-222ENST00000543744 ZNF428Q96B54 188 aa22.67■■□□□ 1.22
PTPN6-222ENST00000543744 DAXXQ9UER7 740 aaPredicted RBP22.67■■□□□ 1.22
PTPN6-222ENST00000543744 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.65■■□□□ 1.22
PTPN6-222ENST00000543744 GNAI1P63096 354 aa22.64■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms