RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 A0A0U1RQG5 324 aaPredicted RBP23.37■■□□□ 1.33
SUDS3-204ENST00000543473 IFIT2P09913 472 aaKnown RBP23.37■■□□□ 1.33
SUDS3-204ENST00000543473 NOC3LQ8WTT2 800 aaKnown RBP23.37■■□□□ 1.33
SUDS3-204ENST00000543473 THEMISQ8N1K5 641 aaPredicted RBP23.36■■□□□ 1.33
SUDS3-204ENST00000543473 TBC1D2Q9BYX2 928 aa23.36■■□□□ 1.33
SUDS3-204ENST00000543473 CT47B1P0C2W7 299 aaPredicted RBP23.36■■□□□ 1.33
SUDS3-204ENST00000543473 MPNDQ8N594 471 aa23.36■■□□□ 1.33
SUDS3-204ENST00000543473 CHD1LQ86WJ1 897 aa23.36■■□□□ 1.33
SUDS3-204ENST00000543473 TRIM5Q9C035 493 aa23.35■■□□□ 1.33
SUDS3-204ENST00000543473 ARGLU1Q9NWB6 273 aaPredicted RBP23.35■■□□□ 1.33
SUDS3-204ENST00000543473 NLRP6P59044 892 aa23.34■■□□□ 1.33
SUDS3-204ENST00000543473 CCDC27Q2M243 656 aa23.34■■□□□ 1.33
SUDS3-204ENST00000543473 TAF7LQ5H9L4 462 aa23.34■■□□□ 1.33
SUDS3-204ENST00000543473 C9orf78Q9NZ63 289 aaPredicted RBP23.34■■□□□ 1.33
SUDS3-204ENST00000543473 ATF3P18847 181 aa23.33■■□□□ 1.33
SUDS3-204ENST00000543473 CCDC73Q6ZRK6 1079 aa23.33■■□□□ 1.33
SUDS3-204ENST00000543473 UBE2Q2Q8WVN8 375 aa23.33■■□□□ 1.33
SUDS3-204ENST00000543473 RPGRIP1LQ68CZ1 1315 aa23.33■■□□□ 1.33
SUDS3-204ENST00000543473 WWC1Q8IX03 1113 aa23.33■■□□□ 1.33
SUDS3-204ENST00000543473 EIF2S2P20042 333 aaKnown RBP23.33■■□□□ 1.33
SUDS3-204ENST00000543473 TPD52L1Q16890 204 aaPredicted RBP23.33■■□□□ 1.33
SUDS3-204ENST00000543473 MNS1Q8NEH6 495 aa23.33■■□□□ 1.32
SUDS3-204ENST00000543473 SLC26A8Q96RN1 970 aa23.33■■□□□ 1.32
SUDS3-204ENST00000543473 RASSF8Q8NHQ8 419 aa23.32■■□□□ 1.32
SUDS3-204ENST00000543473 FIBPO43427 364 aa23.32■■□□□ 1.32
SUDS3-204ENST00000543473 EVA1CP58658 441 aa23.32■■□□□ 1.32
SUDS3-204ENST00000543473 GPATCH8Q9UKJ3 1502 aaKnown RBP23.31■■□□□ 1.32
SUDS3-204ENST00000543473 FBXW7Q969H0 707 aa23.31■■□□□ 1.32
SUDS3-204ENST00000543473 CDK19Q9BWU1 502 aa23.3■■□□□ 1.32
SUDS3-204ENST00000543473 TOMM22Q9NS69 142 aa23.3■■□□□ 1.32
SUDS3-204ENST00000543473 ATP10BO94823 1461 aa23.3■■□□□ 1.32
SUDS3-204ENST00000543473 TPM1P09493 284 aa23.3■■□□□ 1.32
SUDS3-204ENST00000543473 CABP1Q9NZU7 370 aa23.3■■□□□ 1.32
SUDS3-204ENST00000543473 TSPYL4Q9UJ04 414 aa23.29■■□□□ 1.32
SUDS3-204ENST00000543473 PRKAR2BP31323 418 aa23.29■■□□□ 1.32
SUDS3-204ENST00000543473 HSP90AB4PQ58FF6 505 aa23.29■■□□□ 1.32
SUDS3-204ENST00000543473 CCDC66A2RUB6 948 aa23.29■■□□□ 1.32
SUDS3-204ENST00000543473 PES1O00541 588 aaKnown RBP23.29■■□□□ 1.32
SUDS3-204ENST00000543473 ERC2O15083 957 aa23.29■■□□□ 1.32
SUDS3-204ENST00000543473 TWISTNBQ3B726 338 aaPredicted RBP23.29■■□□□ 1.32
SUDS3-204ENST00000543473 SPC24Q8NBT2 197 aa23.29■■□□□ 1.32
SUDS3-204ENST00000543473 FANCAO15360 1455 aa23.28■■□□□ 1.32
SUDS3-204ENST00000543473 TSR1Q2NL82 804 aaKnown RBP23.28■■□□□ 1.32
SUDS3-204ENST00000543473 NUP153P49790 1475 aaKnown RBP23.27■■□□□ 1.32
SUDS3-204ENST00000543473 CPLX2Q6PUV4 134 aaKnown RBP23.27■■□□□ 1.32
SUDS3-204ENST00000543473 DUSP27Q5VZP5 1158 aa23.26■■□□□ 1.31
SUDS3-204ENST00000543473 CPLX1O14810 134 aa23.25■■□□□ 1.31
SUDS3-204ENST00000543473 SETQ01105 290 aaPredicted RBP23.25■■□□□ 1.31
SUDS3-204ENST00000543473 RAPGEF6Q8TEU7 1601 aa23.25■■□□□ 1.31
SUDS3-204ENST00000543473 WDR33Q9C0J8 1336 aaKnown RBP23.25■■□□□ 1.31
SUDS3-204ENST00000543473 PROSER2Q86WR7 435 aaPredicted RBP23.25■■□□□ 1.31
SUDS3-204ENST00000543473 PDCL3Q9H2J4 239 aa23.24■■□□□ 1.31
SUDS3-204ENST00000543473 RARSP54136 660 aaKnown RBP23.24■■□□□ 1.31
SUDS3-204ENST00000543473 G3BP1Q13283 466 aaKnown RBP eCLIP23.24■■□□□ 1.31
SUDS3-204ENST00000543473 ESCO1Q5FWF5 840 aa23.24■■□□□ 1.31
SUDS3-204ENST00000543473 ABTB2Q8N961 1025 aa23.24■■□□□ 1.31
SUDS3-204ENST00000543473 UBTFL1P0CB47 393 aaPredicted RBP23.24■■□□□ 1.31
SUDS3-204ENST00000543473 SDF4Q9BRK5 362 aa23.24■■□□□ 1.31
SUDS3-204ENST00000543473 MAPKBP1O60336 1514 aa23.23■■□□□ 1.31
SUDS3-204ENST00000543473 GNAI3P08754 354 aa23.23■■□□□ 1.31
SUDS3-204ENST00000543473 POGZQ7Z3K3 1410 aa23.23■■□□□ 1.31
SUDS3-204ENST00000543473 LRPPRCP42704 1394 aaKnown RBP23.23■■□□□ 1.31
SUDS3-204ENST00000543473 TNPO1Q92973 898 aaKnown RBP23.22■■□□□ 1.31
SUDS3-204ENST00000543473 NAT10Q9H0A0 1025 aaKnown RBP23.22■■□□□ 1.31
SUDS3-204ENST00000543473 NEXNQ0ZGT2 675 aa23.22■■□□□ 1.31
SUDS3-204ENST00000543473 SYCE3A1L190 88 aa23.22■■□□□ 1.31
SUDS3-204ENST00000543473 PDCP20941 246 aa23.22■■□□□ 1.31
SUDS3-204ENST00000543473 CNTROBQ8N137 903 aa23.22■■□□□ 1.31
SUDS3-204ENST00000543473 CCDC192P0DO97 292 aa23.22■■□□□ 1.31
SUDS3-204ENST00000543473 FOSBP53539 338 aa23.22■■□□□ 1.31
SUDS3-204ENST00000543473 TMEM57Q8N5G2 664 aa23.21■■□□□ 1.31
SUDS3-204ENST00000543473 NKTRP30414 1462 aaKnown RBP23.21■■□□□ 1.31
SUDS3-204ENST00000543473 PTPRKQ15262 1439 aa23.21■■□□□ 1.31
SUDS3-204ENST00000543473 ADAMTS12P58397 1594 aa23.21■■□□□ 1.31
SUDS3-204ENST00000543473 SURF6O75683 361 aaKnown RBP23.2■■□□□ 1.3
SUDS3-204ENST00000543473 TTC5Q8N0Z6 440 aa23.2■■□□□ 1.3
SUDS3-204ENST00000543473 CCDC70Q6NSX1 233 aa23.2■■□□□ 1.3
SUDS3-204ENST00000543473 KIF21AQ7Z4S6 1674 aa23.2■■□□□ 1.3
SUDS3-204ENST00000543473 PSMA5P28066 241 aa23.2■■□□□ 1.3
SUDS3-204ENST00000543473 FBXO31Q5XUX0 539 aaPredicted RBP23.2■■□□□ 1.3
SUDS3-204ENST00000543473 CCDC112Q8NEF3 446 aa23.19■■□□□ 1.3
SUDS3-204ENST00000543473 TBC1D32Q96NH3 1257 aa23.19■■□□□ 1.3
SUDS3-204ENST00000543473 GPRASP1Q5JY77 1395 aa23.19■■□□□ 1.3
SUDS3-204ENST00000543473 CLCN1P35523 988 aa23.19■■□□□ 1.3
SUDS3-204ENST00000543473 RTEL1-TNFRSF6BF6WH68 1400 aa23.18■■□□□ 1.3
SUDS3-204ENST00000543473 IDI1Q13907 227 aa23.18■■□□□ 1.3
SUDS3-204ENST00000543473 TRIM29Q14134 588 aa23.18■■□□□ 1.3
SUDS3-204ENST00000543473 ANKLE2Q86XL3 938 aa23.18■■□□□ 1.3
SUDS3-204ENST00000543473 RAPGEF4Q8WZA2 1011 aa23.18■■□□□ 1.3
SUDS3-204ENST00000543473 NLRP2Q9NX02 1062 aa23.18■■□□□ 1.3
SUDS3-204ENST00000543473 XPCQ01831 940 aaPredicted RBP23.18■■□□□ 1.3
SUDS3-204ENST00000543473 DENND4BO75064 1496 aaPredicted RBP23.18■■□□□ 1.3
SUDS3-204ENST00000543473 IGHDP01880 384 aa23.17■■□□□ 1.3
SUDS3-204ENST00000543473 LRRFIP1Q32MZ4 808 aaKnown RBP23.17■■□□□ 1.3
SUDS3-204ENST00000543473 UGGT2Q9NYU1 1516 aa23.17■■□□□ 1.3
SUDS3-204ENST00000543473 SYNE3Q6ZMZ3 975 aa23.17■■□□□ 1.3
SUDS3-204ENST00000543473 XRCC6P12956 609 aaKnown RBP eCLIP23.17■■□□□ 1.3
SUDS3-204ENST00000543473 CLASRPQ8N2M8 674 aaKnown RBP23.17■■□□□ 1.3
SUDS3-204ENST00000543473 IPO7O95373 1038 aaKnown RBP23.16■■□□□ 1.3
SUDS3-204ENST00000543473 SSFA2P28290 1259 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms