RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 C14orf93Q9H972 538 aaKnown RBP29.63■■■□□ 2.33
SHD-201ENST00000543264 CD2BP2O95400 341 aaKnown RBP29.62■■■□□ 2.33
SHD-201ENST00000543264 MROH2AA6NES4 1674 aa29.62■■■□□ 2.33
SHD-201ENST00000543264 CD109Q6YHK3 1445 aa29.62■■■□□ 2.33
SHD-201ENST00000543264 KIF2CQ99661 725 aa29.62■■■□□ 2.33
SHD-201ENST00000543264 IFT172Q9UG01 1749 aa29.62■■■□□ 2.33
SHD-201ENST00000543264 IPO8O15397 1037 aaKnown RBP29.61■■■□□ 2.33
SHD-201ENST00000543264 PKNOX2Q96KN3 472 aa29.61■■■□□ 2.33
SHD-201ENST00000543264 QRICH2Q9H0J4 1663 aa29.61■■■□□ 2.33
SHD-201ENST00000543264 ZCCHC11Q5TAX3 1644 aaKnown RBP29.61■■■□□ 2.33
SHD-201ENST00000543264 ADGRB2O60241 1585 aa29.61■■■□□ 2.33
SHD-201ENST00000543264 ADGRL1O94910 1474 aa29.6■■■□□ 2.33
SHD-201ENST00000543264 CHD1O14646 1710 aa29.6■■■□□ 2.33
SHD-201ENST00000543264 ATP7AQ04656 1500 aa29.6■■■□□ 2.33
SHD-201ENST00000543264 ANKRD45Q5TZF3 282 aa29.59■■■□□ 2.33
SHD-201ENST00000543264 RIPK4P57078 832 aa29.59■■■□□ 2.33
SHD-201ENST00000543264 RBM42Q9BTD8 480 aaKnown RBP29.59■■■□□ 2.33
SHD-201ENST00000543264 BMP2KLQ5H9B9 411 aa29.58■■■□□ 2.33
SHD-201ENST00000543264 KIF16BQ96L93 1317 aa29.58■■■□□ 2.33
SHD-201ENST00000543264 ZMYND15Q9H091 742 aa29.58■■■□□ 2.33
SHD-201ENST00000543264 PTMSP20962 102 aa29.57■■■□□ 2.32
SHD-201ENST00000543264 CABP2Q9NPB3 220 aa29.57■■■□□ 2.32
SHD-201ENST00000543264 SETBP1Q9Y6X0 1596 aa29.57■■■□□ 2.32
SHD-201ENST00000543264 USP32Q8NFA0 1604 aa29.56■■■□□ 2.32
SHD-201ENST00000543264 K7ELQ4 463 aaPredicted RBP29.56■■■□□ 2.32
SHD-201ENST00000543264 SSFA2P28290 1259 aa29.56■■■□□ 2.32
SHD-201ENST00000543264 EVC2Q86UK5 1308 aa29.55■■■□□ 2.32
SHD-201ENST00000543264 ANKRD36BQ8N2N9 1353 aa29.55■■■□□ 2.32
SHD-201ENST00000543264 ABCC11Q96J66 1382 aa29.55■■■□□ 2.32
SHD-201ENST00000543264 GGNBP2Q9H3C7 697 aa29.55■■■□□ 2.32
SHD-201ENST00000543264 ZC3H13Q5T200 1668 aaKnown RBP29.54■■■□□ 2.32
SHD-201ENST00000543264 NSD2O96028 1365 aa29.54■■■□□ 2.32
SHD-201ENST00000543264 IL16Q14005 1332 aa29.53■■■□□ 2.32
SHD-201ENST00000543264 SAFB2Q14151 953 aaKnown RBP eCLIP29.53■■■□□ 2.32
SHD-201ENST00000543264 TBC1D9Q6ZT07 1266 aa29.52■■■□□ 2.32
SHD-201ENST00000543264 MROH1Q8NDA8 1641 aa29.52■■■□□ 2.32
SHD-201ENST00000543264 NASPP49321 788 aaPredicted RBP29.52■■■□□ 2.32
SHD-201ENST00000543264 GAS2L2Q8NHY3 880 aa29.52■■■□□ 2.32
SHD-201ENST00000543264 GOLGA6L22H0YM25 854 aa29.51■■■□□ 2.31
SHD-201ENST00000543264 CCDC173Q0VFZ6 552 aa29.51■■■□□ 2.31
SHD-201ENST00000543264 C1orf115Q9H7X2 142 aa29.51■■■□□ 2.31
SHD-201ENST00000543264 EFCAB6Q5THR3 1501 aa29.51■■■□□ 2.31
SHD-201ENST00000543264 NUTM2DQ5VT03 806 aaPredicted RBP29.51■■■□□ 2.31
SHD-201ENST00000543264 DDX49Q9Y6V7 483 aaKnown RBP29.5■■■□□ 2.31
SHD-201ENST00000543264 CFAP65Q6ZU64 1925 aaKnown RBP29.49■■■□□ 2.31
SHD-201ENST00000543264 TPM2P07951 284 aa29.49■■■□□ 2.31
SHD-201ENST00000543264 ADGRB1O14514 1584 aa29.49■■■□□ 2.31
SHD-201ENST00000543264 INO80Q9ULG1 1556 aaPredicted RBP29.49■■■□□ 2.31
SHD-201ENST00000543264 ANP32BQ92688 251 aaKnown RBP29.48■■■□□ 2.31
SHD-201ENST00000543264 ALDH1L2Q3SY69 923 aa29.48■■■□□ 2.31
SHD-201ENST00000543264 KIAA1211Q6ZU35 1233 aa29.47■■■□□ 2.31
SHD-201ENST00000543264 PPP1R9BQ96SB3 815 aa29.47■■■□□ 2.31
SHD-201ENST00000543264 GCC1Q96CN9 775 aa29.46■■■□□ 2.31
SHD-201ENST00000543264 FANCAO15360 1455 aa29.46■■■□□ 2.31
SHD-201ENST00000543264 ADGRB3O60242 1522 aa29.46■■■□□ 2.31
SHD-201ENST00000543264 PPRC1Q5VV67 1664 aaKnown RBP29.45■■■□□ 2.31
SHD-201ENST00000543264 ZBTB7BO15156 539 aaPredicted RBP29.45■■■□□ 2.31
SHD-201ENST00000543264 BAG4O95429 457 aaKnown RBP29.45■■■□□ 2.31
SHD-201ENST00000543264 PPIP5K1Q6PFW1 1433 aa29.45■■■□□ 2.3
SHD-201ENST00000543264 PUS7Q96PZ0 661 aaKnown RBP29.44■■■□□ 2.3
SHD-201ENST00000543264 KLHL40Q2TBA0 621 aa29.44■■■□□ 2.3
SHD-201ENST00000543264 ZSCAN30Q86W11 494 aa29.44■■■□□ 2.3
SHD-201ENST00000543264 ARAP3Q8WWN8 1544 aa29.43■■■□□ 2.3
SHD-201ENST00000543264 CFAP74Q9C0B2 1584 aa29.42■■■□□ 2.3
SHD-201ENST00000543264 SENP3Q9H4L4 574 aaPredicted RBP29.42■■■□□ 2.3
SHD-201ENST00000543264 TULP4Q9NRJ4 1543 aa29.41■■■□□ 2.3
SHD-201ENST00000543264 A0A1W2PP64 1363 aa29.41■■■□□ 2.3
SHD-201ENST00000543264 DIAPH1O60610 1272 aaKnown RBP29.41■■■□□ 2.3
SHD-201ENST00000543264 NCLP19338 710 aaKnown RBP29.41■■■□□ 2.3
SHD-201ENST00000543264 SRPK2P78362 688 aaKnown RBP29.41■■■□□ 2.3
SHD-201ENST00000543264 AK9Q5TCS8 1911 aa29.4■■■□□ 2.3
SHD-201ENST00000543264 MSNP26038 577 aaKnown RBP29.4■■■□□ 2.3
SHD-201ENST00000543264 MCTP1Q6DN14 999 aa29.39■■■□□ 2.29
SHD-201ENST00000543264 CLEC17AQ6ZS10 378 aa29.39■■■□□ 2.29
SHD-201ENST00000543264 PPLO60437 1756 aa29.39■■■□□ 2.29
SHD-201ENST00000543264 UHRF1BP1LA0JNW5 1464 aa29.38■■■□□ 2.29
SHD-201ENST00000543264 COL3A1P02461 1466 aaPredicted RBP29.38■■■□□ 2.29
SHD-201ENST00000543264 FYB1O15117 783 aa29.38■■■□□ 2.29
SHD-201ENST00000543264 SIRT2Q8IXJ6 389 aa29.38■■■□□ 2.29
SHD-201ENST00000543264 CDC45O75419 566 aa29.37■■■□□ 2.29
SHD-201ENST00000543264 GGT6Q6P531 493 aa29.37■■■□□ 2.29
SHD-201ENST00000543264 CHMP4BQ9H444 224 aaKnown RBP29.36■■■□□ 2.29
SHD-201ENST00000543264 STK26Q9P289 416 aa29.35■■■□□ 2.29
SHD-201ENST00000543264 RPGRIP1LQ68CZ1 1315 aa29.35■■■□□ 2.29
SHD-201ENST00000543264 ELL2O00472 640 aaPredicted RBP29.35■■■□□ 2.29
SHD-201ENST00000543264 OFD1O75665 1012 aa29.35■■■□□ 2.29
SHD-201ENST00000543264 CAVIN1Q6NZI2 390 aaKnown RBP29.35■■■□□ 2.29
SHD-201ENST00000543264 PDCL3Q9H2J4 239 aa29.35■■■□□ 2.29
SHD-201ENST00000543264 CALD1Q05682 793 aaKnown RBP29.34■■■□□ 2.29
SHD-201ENST00000543264 IBTKQ9P2D0 1353 aaPredicted RBP29.34■■■□□ 2.29
SHD-201ENST00000543264 MRPL50Q8N5N7 158 aaKnown RBP29.34■■■□□ 2.29
SHD-201ENST00000543264 GLI2P10070 1586 aa29.33■■■□□ 2.29
SHD-201ENST00000543264 MED14O60244 1454 aa29.33■■■□□ 2.29
SHD-201ENST00000543264 NPATQ14207 1427 aa29.32■■■□□ 2.28
SHD-201ENST00000543264 VAMP4O75379 141 aa29.32■■■□□ 2.28
SHD-201ENST00000543264 BRPF1P55201 1214 aaPredicted RBP29.32■■■□□ 2.28
SHD-201ENST00000543264 THUMPD2Q9BTF0 503 aaKnown RBP29.32■■■□□ 2.28
SHD-201ENST00000543264 TSPYL6Q8N831 410 aa29.32■■■□□ 2.28
SHD-201ENST00000543264 GSPT1P15170 499 aaKnown RBP29.31■■■□□ 2.28
SHD-201ENST00000543264 PRKAR2BP31323 418 aa29.31■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms