RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 TTC21AQ8NDW8 1320 aa31.67■■■□□ 2.66
HOMER3-205ENST00000542541 AHDC1Q5TGY3 1603 aaPredicted RBP31.66■■■□□ 2.66
HOMER3-205ENST00000542541 SSH2Q76I76 1423 aa31.65■■■□□ 2.66
HOMER3-205ENST00000542541 CGNL1Q0VF96 1302 aa31.65■■■□□ 2.66
HOMER3-205ENST00000542541 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.64■■■□□ 2.66
HOMER3-205ENST00000542541 SBNO1A3KN83 1393 aa31.64■■■□□ 2.66
HOMER3-205ENST00000542541 PXDNQ92626 1479 aa31.64■■■□□ 2.66
HOMER3-205ENST00000542541 MON2Q7Z3U7 1717 aa31.64■■■□□ 2.65
HOMER3-205ENST00000542541 PHLPP1O60346 1717 aa31.62■■■□□ 2.65
HOMER3-205ENST00000542541 COL16A1Q07092 1604 aaPredicted RBP31.61■■■□□ 2.65
HOMER3-205ENST00000542541 ILDR1Q86SU0 546 aaPredicted RBP31.6■■■□□ 2.65
HOMER3-205ENST00000542541 LRRC59Q96AG4 307 aaKnown RBP31.6■■■□□ 2.65
HOMER3-205ENST00000542541 ABTB2Q8N961 1025 aa31.6■■■□□ 2.65
HOMER3-205ENST00000542541 SPATA31A3Q5VYP0 1347 aa31.58■■■□□ 2.65
HOMER3-205ENST00000542541 LMOD2Q6P5Q4 547 aa31.57■■■□□ 2.64
HOMER3-205ENST00000542541 FYB1O15117 783 aa31.57■■■□□ 2.64
HOMER3-205ENST00000542541 AMER1Q5JTC6 1135 aaPredicted RBP31.56■■■□□ 2.64
HOMER3-205ENST00000542541 NRKQ7Z2Y5 1582 aa31.56■■■□□ 2.64
HOMER3-205ENST00000542541 NME9Q86XW9 330 aa31.55■■■□□ 2.64
HOMER3-205ENST00000542541 TNS3Q68CZ2 1445 aa31.55■■■□□ 2.64
HOMER3-205ENST00000542541 ARHGEF10O15013 1369 aa31.55■■■□□ 2.64
HOMER3-205ENST00000542541 HSPA1LP34931 641 aa31.54■■■□□ 2.64
HOMER3-205ENST00000542541 NSD2O96028 1365 aa31.54■■■□□ 2.64
HOMER3-205ENST00000542541 NPC1L1Q9UHC9 1359 aa31.54■■■□□ 2.64
HOMER3-205ENST00000542541 TRPM3Q9HCF6 1732 aaPredicted RBP31.53■■■□□ 2.64
HOMER3-205ENST00000542541 NLRP6P59044 892 aa31.53■■■□□ 2.64
HOMER3-205ENST00000542541 NLRP13Q86W25 1043 aa31.53■■■□□ 2.64
HOMER3-205ENST00000542541 COG3Q96JB2 828 aa31.51■■■□□ 2.63
HOMER3-205ENST00000542541 GGNBP2Q9H3C7 697 aa31.51■■■□□ 2.63
HOMER3-205ENST00000542541 USP31Q70CQ4 1352 aa31.5■■■□□ 2.63
HOMER3-205ENST00000542541 CC2D1BQ5T0F9 858 aaKnown RBP31.49■■■□□ 2.63
HOMER3-205ENST00000542541 NUTM2GQ5VZR2 741 aa31.48■■■□□ 2.63
HOMER3-205ENST00000542541 ZRANB1Q9UGI0 708 aa31.46■■■□□ 2.63
HOMER3-205ENST00000542541 ALS2Q96Q42 1657 aa31.44■■■□□ 2.62
HOMER3-205ENST00000542541 CNGB1Q14028 1251 aaPredicted RBP31.44■■■□□ 2.62
HOMER3-205ENST00000542541 DIEXFQ68CQ4 756 aaKnown RBP31.44■■■□□ 2.62
HOMER3-205ENST00000542541 MORC1Q86VD1 984 aa31.44■■■□□ 2.62
HOMER3-205ENST00000542541 PIK3C2AO00443 1686 aa31.43■■■□□ 2.62
HOMER3-205ENST00000542541 OVOS2A0A0J9YW53 1432 aa31.42■■■□□ 2.62
HOMER3-205ENST00000542541 OVOS2Q6IE36 1432 aa31.42■■■□□ 2.62
HOMER3-205ENST00000542541 KIF20BQ96Q89 1820 aa31.41■■■□□ 2.62
HOMER3-205ENST00000542541 SHPRHQ149N8 1683 aa31.41■■■□□ 2.62
HOMER3-205ENST00000542541 PNPLA6Q8IY17 1366 aa31.4■■■□□ 2.62
HOMER3-205ENST00000542541 JCADQ9P266 1359 aa31.4■■■□□ 2.62
HOMER3-205ENST00000542541 USP19O94966 1318 aa31.39■■■□□ 2.62
HOMER3-205ENST00000542541 KCNH5Q8NCM2 988 aa31.39■■■□□ 2.62
HOMER3-205ENST00000542541 ANP32CO43423 234 aa31.38■■■□□ 2.61
HOMER3-205ENST00000542541 RALBP1Q15311 655 aa31.38■■■□□ 2.61
HOMER3-205ENST00000542541 PLEKHG5O94827 1062 aa31.36■■■□□ 2.61
HOMER3-205ENST00000542541 GCP02774 474 aa31.35■■■□□ 2.61
HOMER3-205ENST00000542541 HAP1P54257 671 aaPredicted RBP31.35■■■□□ 2.61
HOMER3-205ENST00000542541 CABLES1Q8TDN4 633 aa31.35■■■□□ 2.61
HOMER3-205ENST00000542541 PRKRIP1Q9H875 184 aaPredicted RBP31.34■■■□□ 2.61
HOMER3-205ENST00000542541 USP54Q70EL1 1684 aa31.34■■■□□ 2.61
HOMER3-205ENST00000542541 COL22A1Q8NFW1 1626 aaPredicted RBP31.34■■■□□ 2.61
HOMER3-205ENST00000542541 MED1Q15648 1581 aaPredicted RBP31.33■■■□□ 2.61
HOMER3-205ENST00000542541 TNNT2P45379 298 aaPredicted RBP31.32■■■□□ 2.6
HOMER3-205ENST00000542541 PARD3Q8TEW0 1356 aa31.32■■■□□ 2.6
HOMER3-205ENST00000542541 ANKRD26Q9UPS8 1709 aa31.32■■■□□ 2.6
HOMER3-205ENST00000542541 SOX12O15370 315 aa31.31■■■□□ 2.6
HOMER3-205ENST00000542541 SLIT3O75094 1523 aa31.3■■■□□ 2.6
HOMER3-205ENST00000542541 AATKQ6ZMQ8 1374 aa31.29■■■□□ 2.6
HOMER3-205ENST00000542541 SPATA31A6Q5VVP1 1343 aa31.29■■■□□ 2.6
HOMER3-205ENST00000542541 CRYBG1Q9Y4K1 1723 aa31.28■■■□□ 2.6
HOMER3-205ENST00000542541 ABCA3Q99758 1704 aa31.27■■■□□ 2.6
HOMER3-205ENST00000542541 MARF1Q9Y4F3 1742 aaKnown RBP31.26■■■□□ 2.59
HOMER3-205ENST00000542541 NUTM2BA6NNL0 878 aaPredicted RBP31.23■■■□□ 2.59
HOMER3-205ENST00000542541 NUTM2EB1AL46 878 aaPredicted RBP31.23■■■□□ 2.59
HOMER3-205ENST00000542541 FBLN1P23142 703 aa31.23■■■□□ 2.59
HOMER3-205ENST00000542541 PPP2R1AP30153 589 aa31.23■■■□□ 2.59
HOMER3-205ENST00000542541 ZC3H6P61129 1189 aaKnown RBP31.23■■■□□ 2.59
HOMER3-205ENST00000542541 NUTM2AQ8IVF1 878 aaPredicted RBP31.23■■■□□ 2.59
HOMER3-205ENST00000542541 MYBBP1AQ9BQG0 1328 aaKnown RBP31.23■■■□□ 2.59
HOMER3-205ENST00000542541 RRS1Q15050 365 aaKnown RBP31.21■■■□□ 2.59
HOMER3-205ENST00000542541 ARHGEF25Q86VW2 580 aa31.21■■■□□ 2.59
HOMER3-205ENST00000542541 PHRF1Q9P1Y6 1649 aaKnown RBP31.21■■■□□ 2.59
HOMER3-205ENST00000542541 NFAT5O94916 1531 aa31.21■■■□□ 2.59
HOMER3-205ENST00000542541 CPDO75976 1380 aa31.2■■■□□ 2.59
HOMER3-205ENST00000542541 POLKQ9UBT6 870 aa31.2■■■□□ 2.59
HOMER3-205ENST00000542541 LRP6O75581 1613 aa31.19■■■□□ 2.58
HOMER3-205ENST00000542541 MAP3K19Q56UN5 1328 aa31.19■■■□□ 2.58
HOMER3-205ENST00000542541 PRDM11Q9NQV5 511 aa31.18■■■□□ 2.58
HOMER3-205ENST00000542541 ZBTB7CA1YPR0 619 aa31.17■■■□□ 2.58
HOMER3-205ENST00000542541 AMPHP49418 695 aa31.17■■■□□ 2.58
HOMER3-205ENST00000542541 MTHFSP49914 203 aa31.17■■■□□ 2.58
HOMER3-205ENST00000542541 KIF24Q5T7B8 1368 aa31.17■■■□□ 2.58
HOMER3-205ENST00000542541 KIAA0232Q92628 1395 aa31.17■■■□□ 2.58
HOMER3-205ENST00000542541 PPM1GO15355 546 aaPredicted RBP31.16■■■□□ 2.58
HOMER3-205ENST00000542541 EMILIN1Q9Y6C2 1016 aa31.16■■■□□ 2.58
HOMER3-205ENST00000542541 ADAMTS2O95450 1211 aa31.15■■■□□ 2.58
HOMER3-205ENST00000542541 IP6K1Q92551 441 aa31.12■■■□□ 2.57
HOMER3-205ENST00000542541 RTL1A6NKG5 1358 aa31.12■■■□□ 2.57
HOMER3-205ENST00000542541 SMG6Q86US8 1419 aaKnown RBP31.11■■■□□ 2.57
HOMER3-205ENST00000542541 FLT4P35916 1363 aa31.11■■■□□ 2.57
HOMER3-205ENST00000542541 CFAP53Q96M91 514 aa31.11■■■□□ 2.57
HOMER3-205ENST00000542541 FAM83GA6ND36 823 aa31.1■■■□□ 2.57
HOMER3-205ENST00000542541 HOXC9P31274 260 aa31.09■■■□□ 2.57
HOMER3-205ENST00000542541 CHRNA2Q15822 529 aa31.09■■■□□ 2.57
HOMER3-205ENST00000542541 MAP2P11137 1827 aaKnown RBP31.09■■■□□ 2.57
HOMER3-205ENST00000542541 MEX3CQ5U5Q3 659 aaKnown RBP31.08■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms