RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 STK31Q9BXU1 1019 aa12.34□□□□□ -0.43
PHC1-208ENST00000540574 ZMYM4Q5VZL5 1548 aa12.34□□□□□ -0.43
PHC1-208ENST00000540574 NLRP6P59044 892 aa12.34□□□□□ -0.43
PHC1-208ENST00000540574 PIK3C2GO75747 1445 aa12.33□□□□□ -0.44
PHC1-208ENST00000540574 CASC1Q6TDU7 716 aa12.33□□□□□ -0.44
PHC1-208ENST00000540574 NPATQ14207 1427 aa12.33□□□□□ -0.44
PHC1-208ENST00000540574 ANP32BQ92688 251 aaKnown RBP12.33□□□□□ -0.44
PHC1-208ENST00000540574 RILPL2Q969X0 211 aa12.33□□□□□ -0.44
PHC1-208ENST00000540574 CHMP4BQ9H444 224 aaKnown RBP12.33□□□□□ -0.44
PHC1-208ENST00000540574 ZNF518AQ6AHZ1 1483 aa12.33□□□□□ -0.44
PHC1-208ENST00000540574 LMOD3Q0VAK6 560 aa12.33□□□□□ -0.44
PHC1-208ENST00000540574 AEBP1Q8IUX7 1158 aa12.33□□□□□ -0.44
PHC1-208ENST00000540574 TSPYL4Q9UJ04 414 aa12.33□□□□□ -0.44
PHC1-208ENST00000540574 TRPM1Q7Z4N2 1603 aa12.32□□□□□ -0.44
PHC1-208ENST00000540574 PTPRTO14522 1441 aa12.32□□□□□ -0.44
PHC1-208ENST00000540574 GOLGA6L22H0YM25 854 aa12.32□□□□□ -0.44
PHC1-208ENST00000540574 FKBP5Q13451 457 aaPredicted RBP12.32□□□□□ -0.44
PHC1-208ENST00000540574 TRIM44Q96DX7 344 aaPredicted RBP12.32□□□□□ -0.44
PHC1-208ENST00000540574 CCDC61Q9Y6R9 512 aa12.32□□□□□ -0.44
PHC1-208ENST00000540574 ERVK-7P63135 1459 aa12.32□□□□□ -0.44
PHC1-208ENST00000540574 ZCCHC11Q5TAX3 1644 aaKnown RBP12.31□□□□□ -0.44
PHC1-208ENST00000540574 POLR3AO14802 1390 aaPredicted RBP12.31□□□□□ -0.44
PHC1-208ENST00000540574 ATAD2Q6PL18 1390 aa12.31□□□□□ -0.44
PHC1-208ENST00000540574 FCHSD2O94868 740 aa12.31□□□□□ -0.44
PHC1-208ENST00000540574 ZNF521Q96K83 1311 aa12.31□□□□□ -0.44
PHC1-208ENST00000540574 POLKQ9UBT6 870 aa12.31□□□□□ -0.44
PHC1-208ENST00000540574 SLC4A2P04920 1241 aa12.31□□□□□ -0.44
PHC1-208ENST00000540574 NFE2L2Q16236 605 aa12.31□□□□□ -0.44
PHC1-208ENST00000540574 ABCC1P33527 1531 aa12.3□□□□□ -0.44
PHC1-208ENST00000540574 SMARCA5O60264 1052 aaPredicted RBP12.3□□□□□ -0.44
PHC1-208ENST00000540574 PRDM15P57071 1507 aaPredicted RBP12.3□□□□□ -0.44
PHC1-208ENST00000540574 ANKRD36BQ8N2N9 1353 aa12.3□□□□□ -0.44
PHC1-208ENST00000540574 F6X3S4 739 aa12.3□□□□□ -0.44
PHC1-208ENST00000540574 TBC1D2Q9BYX2 928 aa12.3□□□□□ -0.44
PHC1-208ENST00000540574 XPCQ01831 940 aaPredicted RBP12.3□□□□□ -0.44
PHC1-208ENST00000540574 CHD1LQ86WJ1 897 aa12.29□□□□□ -0.44
PHC1-208ENST00000540574 HSP90AB2PQ58FF8 381 aa12.29□□□□□ -0.44
PHC1-208ENST00000540574 WASLO00401 505 aaPredicted RBP12.29□□□□□ -0.44
PHC1-208ENST00000540574 TRIM35Q9UPQ4 493 aa12.29□□□□□ -0.44
PHC1-208ENST00000540574 USHBP1Q8N6Y0 703 aa12.28□□□□□ -0.44
PHC1-208ENST00000540574 API5Q9BZZ5 524 aaKnown RBP12.28□□□□□ -0.44
PHC1-208ENST00000540574 MBIPQ9NS73 344 aa12.28□□□□□ -0.44
PHC1-208ENST00000540574 CCDC9Q9Y3X0 531 aaKnown RBP12.28□□□□□ -0.44
PHC1-208ENST00000540574 GOLGA6L3A6NEY3 463 aa12.28□□□□□ -0.44
PHC1-208ENST00000540574 C8orf58Q8NAV2 365 aa12.28□□□□□ -0.44
PHC1-208ENST00000540574 NAP1L5Q96NT1 182 aaPredicted RBP12.28□□□□□ -0.44
PHC1-208ENST00000540574 PLCB2Q00722 1185 aa12.27□□□□□ -0.44
PHC1-208ENST00000540574 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.27□□□□□ -0.44
PHC1-208ENST00000540574 ABTB2Q8N961 1025 aa12.27□□□□□ -0.45
PHC1-208ENST00000540574 YEATS2Q9ULM3 1422 aa12.27□□□□□ -0.45
PHC1-208ENST00000540574 TSHZ3Q63HK5 1081 aa12.26□□□□□ -0.45
PHC1-208ENST00000540574 CLTCL1P53675 1640 aa12.26□□□□□ -0.45
PHC1-208ENST00000540574 FOXO3O43524 673 aa12.25□□□□□ -0.45
PHC1-208ENST00000540574 RBM42Q9BTD8 480 aaKnown RBP12.25□□□□□ -0.45
PHC1-208ENST00000540574 CHMP5Q9NZZ3 219 aa12.25□□□□□ -0.45
PHC1-208ENST00000540574 ZNF330Q9Y3S2 320 aaPredicted RBP12.25□□□□□ -0.45
PHC1-208ENST00000540574 KCNJ4P48050 445 aa12.25□□□□□ -0.45
PHC1-208ENST00000540574 TRMT2AQ8IZ69 625 aaKnown RBP12.25□□□□□ -0.45
PHC1-208ENST00000540574 EXOC6BQ9Y2D4 811 aa12.25□□□□□ -0.45
PHC1-208ENST00000540574 C16orf71Q8IYS4 520 aaPredicted RBP12.25□□□□□ -0.45
PHC1-208ENST00000540574 HAP1P54257 671 aaPredicted RBP12.24□□□□□ -0.45
PHC1-208ENST00000540574 ZFYVE16Q7Z3T8 1539 aa12.24□□□□□ -0.45
PHC1-208ENST00000540574 GBP4Q96PP9 640 aa12.24□□□□□ -0.45
PHC1-208ENST00000540574 ANO8Q9HCE9 1232 aaPredicted RBP12.24□□□□□ -0.45
PHC1-208ENST00000540574 IQGAP3Q86VI3 1631 aa12.24□□□□□ -0.45
PHC1-208ENST00000540574 HMMRO75330 724 aa12.24□□□□□ -0.45
PHC1-208ENST00000540574 MAP4K4O95819 1239 aaPredicted RBP12.24□□□□□ -0.45
PHC1-208ENST00000540574 TRPM2O94759 1503 aa12.23□□□□□ -0.45
PHC1-208ENST00000540574 L1TD1Q5T7N2 865 aaKnown RBP12.23□□□□□ -0.45
PHC1-208ENST00000540574 ANO2Q9NQ90 1003 aa12.23□□□□□ -0.45
PHC1-208ENST00000540574 DDX49Q9Y6V7 483 aaKnown RBP12.23□□□□□ -0.45
PHC1-208ENST00000540574 CSB-PGBD3P0DP91 1061 aa12.22□□□□□ -0.45
PHC1-208ENST00000540574 NPC1L1Q9UHC9 1359 aa12.22□□□□□ -0.45
PHC1-208ENST00000540574 E9PCH4 1651 aa12.22□□□□□ -0.45
PHC1-208ENST00000540574 ACEP12821 1306 aa12.22□□□□□ -0.45
PHC1-208ENST00000540574 TRAK2O60296 914 aa12.22□□□□□ -0.45
PHC1-208ENST00000540574 PSME1Q06323 249 aa12.22□□□□□ -0.45
PHC1-208ENST00000540574 TBC1D32Q96NH3 1257 aa12.22□□□□□ -0.45
PHC1-208ENST00000540574 AIMP1Q12904 312 aaKnown RBP12.22□□□□□ -0.45
PHC1-208ENST00000540574 IL1RAPL2Q9NP60 686 aa12.22□□□□□ -0.45
PHC1-208ENST00000540574 VAMP4O75379 141 aa12.21□□□□□ -0.45
PHC1-208ENST00000540574 TEFQ10587 303 aa12.21□□□□□ -0.45
PHC1-208ENST00000540574 NINLQ9Y2I6 1382 aa12.21□□□□□ -0.45
PHC1-208ENST00000540574 KDM5AP29375 1690 aaKnown RBP12.21□□□□□ -0.45
PHC1-208ENST00000540574 YTHDC2Q9H6S0 1430 aaKnown RBP12.21□□□□□ -0.46
PHC1-208ENST00000540574 UNC13BO14795 1591 aa12.21□□□□□ -0.46
PHC1-208ENST00000540574 AMOTL2Q9Y2J4 779 aa12.21□□□□□ -0.46
PHC1-208ENST00000540574 CCDC27Q2M243 656 aa12.2□□□□□ -0.46
PHC1-208ENST00000540574 RSPH6AQ9H0K4 717 aa12.2□□□□□ -0.46
PHC1-208ENST00000540574 ANXA1P04083 346 aa12.2□□□□□ -0.46
PHC1-208ENST00000540574 CT47B1P0C2W7 299 aaPredicted RBP12.2□□□□□ -0.46
PHC1-208ENST00000540574 AAMPQ13685 434 aa12.2□□□□□ -0.46
PHC1-208ENST00000540574 ESCO1Q5FWF5 840 aa12.2□□□□□ -0.46
PHC1-208ENST00000540574 NAP1L2Q9ULW6 460 aaPredicted RBP12.2□□□□□ -0.46
PHC1-208ENST00000540574 CDC45O75419 566 aa12.19□□□□□ -0.46
PHC1-208ENST00000540574 ZNF692Q9BU19 519 aaPredicted RBP12.19□□□□□ -0.46
PHC1-208ENST00000540574 POLR1AO95602 1720 aaPredicted RBP12.19□□□□□ -0.46
PHC1-208ENST00000540574 POGZQ7Z3K3 1410 aa12.19□□□□□ -0.46
PHC1-208ENST00000540574 MCTP1Q6DN14 999 aa12.19□□□□□ -0.46
PHC1-208ENST00000540574 MEIS3Q99687 375 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms